foundationdb/fdbserver/DeltaTree.h

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/*
* DeltaTree.h
*
* This source file is part of the FoundationDB open source project
*
* Copyright 2013-2018 Apple Inc. and the FoundationDB project authors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
#pragma once
#include "flow/flow.h"
#include "flow/Arena.h"
#include "fdbclient/FDBTypes.h"
#include "fdbserver/Knobs.h"
#include <string.h>
#define deltatree_printf(...)
//#define deltatree_printf(...) printf(__VA_ARGS__)
typedef uint64_t Word;
// Get the number of prefix bytes that are the same between a and b, up to their common length of cl
static inline int commonPrefixLength(uint8_t const* ap, uint8_t const* bp, int cl) {
int i = 0;
const int wordEnd = cl - sizeof(Word) + 1;
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for (; i < wordEnd; i += sizeof(Word)) {
Word a = *(Word*)ap;
Word b = *(Word*)bp;
if (a != b) {
return i + ctzll(a ^ b) / 8;
}
ap += sizeof(Word);
bp += sizeof(Word);
}
for (; i < cl; i++) {
if (*ap != *bp) {
return i;
}
++ap;
++bp;
}
return cl;
}
static inline int commonPrefixLength(const StringRef& a, const StringRef& b) {
return commonPrefixLength(a.begin(), b.begin(), std::min(a.size(), b.size()));
}
static inline int commonPrefixLength(const StringRef& a, const StringRef& b, int skipLen) {
return commonPrefixLength(a.begin() + skipLen, b.begin() + skipLen, std::min(a.size(), b.size()) - skipLen);
}
// This appears to be the fastest version
static int lessOrEqualPowerOfTwo(int n) {
int p;
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for (p = 1; p + p <= n; p += p)
;
return p;
}
/*
static int _lessOrEqualPowerOfTwo(uint32_t n) {
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if(n == 0)
return n;
int trailing = __builtin_ctz(n);
int leading = __builtin_clz(n);
if(trailing + leading == ((sizeof(n) * 8) - 1))
return n;
return 1 << ( (sizeof(n) * 8) - leading - 1);
}
static int __lessOrEqualPowerOfTwo(unsigned int n) {
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int p = 1;
for(; p <= n; p <<= 1);
return p >> 1;
}
*/
static int perfectSubtreeSplitPoint(int subtree_size) {
// return the inorder index of the root node in a subtree of the given size
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// consistent with the resulting binary search tree being "perfect" (having minimal height
// and all missing nodes as far right as possible).
// There has to be a simpler way to do this.
int s = lessOrEqualPowerOfTwo((subtree_size - 1) / 2 + 1) - 1;
return std::min(s * 2 + 1, subtree_size - s - 1);
}
static int perfectSubtreeSplitPointCached(int subtree_size) {
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static uint16_t* points = nullptr;
static const int max = 500;
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if (points == nullptr) {
points = new uint16_t[max];
for (int i = 0; i < max; ++i)
points[i] = perfectSubtreeSplitPoint(i);
}
if (subtree_size < max)
return points[subtree_size];
return perfectSubtreeSplitPoint(subtree_size);
}
// Delta Tree is a memory mappable binary tree of T objects such that each node's item is
// stored as a Delta which can reproduce the node's T item given the node's greatest
// lesser ancestor and the node's least greater ancestor.
//
// The Delta type is intended to make use of ordered prefix compression and borrow all
// available prefix bytes from the ancestor T which shares the most prefix bytes with
// the item T being encoded.
//
// T requirements
//
// Must be compatible with Standalone<T> and must implement the following additional methods:
//
// // Writes to d a delta which can create *this from base
// // commonPrefix can be passed in if known
// void writeDelta(dT &d, const T &base, int commonPrefix = -1) const;
//
// // Compare *this to t, returns < 0 for less than, 0 for equal, > 0 for greater than
// // The first skipLen bytes can be assumed to be equal
// int compare(const T &rhs, int skipLen) const;
//
// // Get the common prefix bytes between *this and base
// // skip is a hint of how many prefix bytes are already known to be the same
// int getCommonPrefixLen(const T &base, int skip) const;
//
// // Returns the size of the delta object needed to make *this from base
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// // TODO: Explain contract required for deltaSize to be used to predict final
// // balanced tree size incrementally while adding sorted items to a build set
// int deltaSize(const T &base) const;
//
// DeltaT requirements
//
// // Returns the size of this dT instance
// int size();
//
// // Returns the T created by applying the delta to prev or next
// T apply(const T &base, Arena &localStorage) const;
//
// // Stores a boolean which DeltaTree will later use to determine the base node for a node's delta
// void setPrefixSource(bool val);
//
// // Retrieves the previously stored boolean
// bool getPrefixSource() const;
//
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#pragma pack(push, 1)
template <typename T, typename DeltaT = typename T::Delta>
struct DeltaTree {
struct Node {
union {
struct {
uint32_t left;
uint32_t right;
} largeOffsets;
struct {
uint16_t left;
uint16_t right;
} smallOffsets;
};
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static int headerSize(bool large) { return large ? sizeof(largeOffsets) : sizeof(smallOffsets); }
inline DeltaT& delta(bool large) {
return large ? *(DeltaT*)(&largeOffsets + 1) : *(DeltaT*)(&smallOffsets + 1);
};
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inline const DeltaT& delta(bool large) const {
return large ? *(const DeltaT*)(&largeOffsets + 1) : *(const DeltaT*)(&smallOffsets + 1);
};
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Node* resolvePointer(int offset) const { return offset == 0 ? nullptr : (Node*)((uint8_t*)this + offset); }
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Node* rightChild(bool large) const { return resolvePointer(large ? largeOffsets.right : smallOffsets.right); }
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Node* leftChild(bool large) const { return resolvePointer(large ? largeOffsets.left : smallOffsets.left); }
void setRightChildOffset(bool large, int offset) {
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if (large) {
largeOffsets.right = offset;
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} else {
smallOffsets.right = offset;
}
}
void setLeftChildOffset(bool large, int offset) {
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if (large) {
largeOffsets.left = offset;
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} else {
smallOffsets.left = offset;
}
}
};
static constexpr int SmallSizeLimit = std::numeric_limits<uint16_t>::max();
static constexpr int LargeTreePerNodeExtraOverhead = sizeof(Node::largeOffsets) - sizeof(Node::smallOffsets);
struct {
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uint16_t numItems; // Number of items in the tree.
uint32_t nodeBytesUsed; // Bytes used by nodes (everything after the tree header)
uint32_t nodeBytesFree; // Bytes left at end of tree to expand into
uint32_t nodeBytesDeleted; // Delta bytes deleted from tree. Note that some of these bytes could be borrowed by
// descendents.
uint8_t initialHeight; // Height of tree as originally built
uint8_t maxHeight; // Maximum height of tree after any insertion. Value of 0 means no insertions done.
bool largeNodes; // Node size, can be calculated as capacity > SmallSizeLimit but it will be used a lot
};
#pragma pack(pop)
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inline Node& root() { return *(Node*)(this + 1); }
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inline const Node& root() const { return *(const Node*)(this + 1); }
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int size() const { return sizeof(DeltaTree) + nodeBytesUsed; }
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int capacity() const { return size() + nodeBytesFree; }
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inline Node& newNode() { return *(Node*)((uint8_t*)this + size()); }
public:
struct DecodedNode {
DecodedNode() {}
// construct root node
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DecodedNode(Node* raw, const T* prev, const T* next, Arena& arena, bool large)
: raw(raw), parent(nullptr), otherAncestor(nullptr), leftChild(nullptr), rightChild(nullptr), prev(prev),
next(next), item(raw->delta(large).apply(raw->delta(large).getPrefixSource() ? *prev : *next, arena)),
large(large) {
// printf("DecodedNode1 raw=%p delta=%s\n", raw, raw->delta(large).toString().c_str());
}
// Construct non-root node
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// wentLeft indicates that we've gone left to get to the raw node.
DecodedNode(Node* raw, DecodedNode* parent, bool wentLeft, Arena& arena)
: parent(parent), large(parent->large),
otherAncestor(wentLeft ? parent->getPrevAncestor() : parent->getNextAncestor()),
prev(wentLeft ? parent->prev : &parent->item), next(wentLeft ? &parent->item : parent->next),
leftChild(nullptr), rightChild(nullptr), raw(raw),
item(raw->delta(large).apply(raw->delta(large).getPrefixSource() ? *prev : *next, arena)) {
// printf("DecodedNode2 raw=%p delta=%s\n", raw, raw->delta(large).toString().c_str());
}
// Returns true if otherAncestor is the previous ("greatest lesser") ancestor
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bool otherAncestorPrev() const { return parent && parent->leftChild == this; }
// Returns true if otherAncestor is the next ("least greator") ancestor
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bool otherAncestorNext() const { return parent && parent->rightChild == this; }
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DecodedNode* getPrevAncestor() const { return otherAncestorPrev() ? otherAncestor : parent; }
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DecodedNode* getNextAncestor() const { return otherAncestorNext() ? otherAncestor : parent; }
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DecodedNode* jumpUpNext(DecodedNode* root, bool& othersChild) const {
if (parent != nullptr) {
if (parent->rightChild == this) {
return otherAncestor;
}
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if (otherAncestor != nullptr) {
othersChild = true;
return otherAncestor->rightChild;
}
}
return parent;
}
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DecodedNode* jumpUpPrev(DecodedNode* root, bool& othersChild) const {
if (parent != nullptr) {
if (parent->leftChild == this) {
return otherAncestor;
}
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if (otherAncestor != nullptr) {
othersChild = true;
return otherAncestor->leftChild;
}
}
return parent;
}
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DecodedNode* jumpNext(DecodedNode* root) const {
if (otherAncestorNext()) {
return (otherAncestor != nullptr) ? otherAncestor : rightChild;
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} else {
if (this == root) {
return rightChild;
}
return (otherAncestor != nullptr) ? otherAncestor->rightChild : root;
}
}
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DecodedNode* jumpPrev(DecodedNode* root) const {
if (otherAncestorPrev()) {
return (otherAncestor != nullptr) ? otherAncestor : leftChild;
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} else {
if (this == root) {
return leftChild;
}
return (otherAncestor != nullptr) ? otherAncestor->leftChild : root;
}
}
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void setDeleted(bool deleted) { raw->delta(large).setDeleted(deleted); }
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bool isDeleted() const { return raw->delta(large).getDeleted(); }
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bool large; // Node size
Node* raw;
DecodedNode* parent;
DecodedNode* otherAncestor;
DecodedNode* leftChild;
DecodedNode* rightChild;
const T* prev; // greatest ancestor to the left, or tree lower bound
const T* next; // least ancestor to the right, or tree upper bound
T item;
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DecodedNode* getRightChild(Arena& arena) {
if (rightChild == nullptr) {
Node* n = raw->rightChild(large);
if (n != nullptr) {
rightChild = new (arena) DecodedNode(n, this, false, arena);
}
}
return rightChild;
}
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DecodedNode* getLeftChild(Arena& arena) {
if (leftChild == nullptr) {
Node* n = raw->leftChild(large);
if (n != nullptr) {
leftChild = new (arena) DecodedNode(n, this, true, arena);
}
}
return leftChild;
}
};
struct Cursor;
// A Mirror is an accessor for a DeltaTree which allows insertion and reading. Both operations are done
// using cursors which point to and share nodes in an tree that is built on-demand and mirrors the compressed
// structure but with fully reconstituted items (which reference DeltaTree bytes or Arena bytes, based
// on the behavior of T::Delta::apply())
struct Mirror : FastAllocated<Mirror> {
friend class Cursor;
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Mirror(const void* treePtr = nullptr, const T* lowerBound = nullptr, const T* upperBound = nullptr)
: tree((DeltaTree*)treePtr), lower(lowerBound), upper(upperBound) {
lower = new (arena) T(arena, *lower);
upper = new (arena) T(arena, *upper);
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root = (tree->nodeBytesUsed == 0) ? nullptr
: new (arena)
DecodedNode(&tree->root(), lower, upper, arena, tree->largeNodes);
}
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const T* lowerBound() const { return lower; }
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const T* upperBound() const { return upper; }
DeltaTree* tree;
Arena arena;
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private:
DecodedNode* root;
const T* lower;
const T* upper;
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public:
Cursor getCursor() { return Cursor(this); }
// Try to insert k into the DeltaTree, updating byte counts and initialHeight if they
// have changed (they won't if k already exists in the tree but was deleted).
// Returns true if successful, false if k does not fit in the space available
// or if k is already in the tree (and was not already deleted).
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// Insertion on an empty tree returns false as well.
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bool insert(const T& k, int skipLen = 0, int maxHeightAllowed = std::numeric_limits<int>::max()) {
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if (root == nullptr) {
return false;
}
int height = 1;
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DecodedNode* n = root;
bool addLeftChild = false;
while (true) {
int cmp = k.compare(n->item, skipLen);
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if (cmp >= 0) {
// If we found an item identical to k then if it is deleted, undeleted it,
// otherwise fail
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if (cmp == 0) {
auto& d = n->raw->delta(tree->largeNodes);
if (d.getDeleted()) {
d.setDeleted(false);
++tree->numItems;
return true;
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} else {
return false;
}
}
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DecodedNode* right = n->getRightChild(arena);
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if (right == nullptr) {
break;
}
n = right;
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} else {
DecodedNode* left = n->getLeftChild(arena);
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if (left == nullptr) {
addLeftChild = true;
break;
}
n = left;
}
++height;
}
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if (height > maxHeightAllowed) {
return false;
}
// Insert k as the left or right child of n, depending on the value of addLeftChild
// First, see if it will fit.
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const T* prev = addLeftChild ? n->prev : &n->item;
const T* next = addLeftChild ? &n->item : n->next;
int common = prev->getCommonPrefixLen(*next, skipLen);
int commonWithPrev = k.getCommonPrefixLen(*prev, common);
int commonWithNext = k.getCommonPrefixLen(*next, common);
bool basePrev = commonWithPrev >= commonWithNext;
int commonPrefix = basePrev ? commonWithPrev : commonWithNext;
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const T* base = basePrev ? prev : next;
int deltaSize = k.deltaSize(*base, commonPrefix, false);
int nodeSpace = deltaSize + Node::headerSize(tree->largeNodes);
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if (nodeSpace > tree->nodeBytesFree) {
return false;
}
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DecodedNode* newNode = new (arena) DecodedNode();
Node* raw = &tree->newNode();
raw->setLeftChildOffset(tree->largeNodes, 0);
raw->setRightChildOffset(tree->largeNodes, 0);
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int newOffset = (uint8_t*)raw - (uint8_t*)n->raw;
// printf("Inserting %s at offset %d\n", k.toString().c_str(), newOffset);
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if (addLeftChild) {
n->leftChild = newNode;
n->raw->setLeftChildOffset(tree->largeNodes, newOffset);
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} else {
n->rightChild = newNode;
n->raw->setRightChildOffset(tree->largeNodes, newOffset);
}
newNode->parent = n;
newNode->large = tree->largeNodes;
newNode->leftChild = nullptr;
newNode->rightChild = nullptr;
newNode->raw = raw;
newNode->otherAncestor = addLeftChild ? n->getPrevAncestor() : n->getNextAncestor();
newNode->prev = prev;
newNode->next = next;
int written = k.writeDelta(raw->delta(tree->largeNodes), *base, commonPrefix);
ASSERT(deltaSize == written);
raw->delta(tree->largeNodes).setPrefixSource(basePrev);
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// Initialize node's item from the delta (instead of copying into arena) to avoid unnecessary arena space
// usage
newNode->item = raw->delta(tree->largeNodes).apply(*base, arena);
tree->nodeBytesUsed += nodeSpace;
tree->nodeBytesFree -= nodeSpace;
++tree->numItems;
// Update max height of the tree if necessary
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if (height > tree->maxHeight) {
tree->maxHeight = height;
}
return true;
}
// Erase k by setting its deleted flag to true. Returns true only if k existed
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bool erase(const T& k, int skipLen = 0) {
Cursor c = getCursor();
int cmp = c.seek(k);
// If exactly k is found
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if (cmp == 0 && !c.node->isDeleted()) {
c.erase();
return true;
}
return false;
}
};
// Cursor provides a way to seek into a DeltaTree and iterate over its contents
// All Cursors from a Mirror share the same decoded node 'cache' (tree of DecodedNodes)
struct Cursor {
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Cursor() : mirror(nullptr), node(nullptr) {}
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Cursor(Mirror* r) : mirror(r), node(mirror->root) {}
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Mirror* mirror;
DecodedNode* node;
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bool valid() const { return node != nullptr; }
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const T& get() const { return node->item; }
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const T& getOrUpperBound() const { return valid() ? node->item : *mirror->upperBound(); }
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const T& lowerBound() const { return *mirror->lowerBound(); }
const T& upperBound() const { return *mirror->upperBound(); }
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bool operator==(const Cursor& rhs) const { return node == rhs.node; }
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bool operator!=(const Cursor& rhs) const { return node != rhs.node; }
void erase() {
node->setDeleted(true);
--mirror->tree->numItems;
moveNext();
}
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// TODO: Make hint-based seek() use the hint logic in this, which is better and actually improves seek times,
// then remove this function.
bool seekLessThanOrEqualOld(const T& s, int skipLen, const Cursor* pHint, int initialCmp) {
DecodedNode* n;
// If there's a hint position, use it
// At the end of using the hint, if n is valid it should point to a node which has not yet been compared to.
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if (pHint != nullptr && pHint->node != nullptr) {
n = pHint->node;
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if (initialCmp == 0) {
node = n;
return _hideDeletedBackward();
}
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if (initialCmp > 0) {
node = n;
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while (n != nullptr) {
n = n->jumpNext(mirror->root);
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if (n == nullptr) {
break;
}
int cmp = s.compare(n->item, skipLen);
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if (cmp > 0) {
node = n;
continue;
}
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if (cmp == 0) {
node = n;
n = nullptr;
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} else {
n = n->leftChild;
}
break;
}
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} else {
while (n != nullptr) {
n = n->jumpPrev(mirror->root);
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if (n == nullptr) {
break;
}
int cmp = s.compare(n->item, skipLen);
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if (cmp >= 0) {
node = n;
n = (cmp == 0) ? nullptr : n->rightChild;
break;
}
}
}
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} else {
// Start at root, clear current position
n = mirror->root;
node = nullptr;
}
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while (n != nullptr) {
int cmp = s.compare(n->item, skipLen);
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if (cmp < 0) {
n = n->getLeftChild(mirror->arena);
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} else {
// n <= s so store it in node as a potential result
node = n;
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if (cmp == 0) {
break;
}
n = n->getRightChild(mirror->arena);
}
}
return _hideDeletedBackward();
}
// The seek methods, of the form seek[Less|Greater][orEqual](...) are very similar.
// They attempt move the cursor to the [Greatest|Least] item, based on the name of the function.
// Then will not "see" erased records.
// If successful, they return true, and if not then false a while making the cursor invalid.
// These methods forward arguments to the seek() overloads, see those for argument descriptions.
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template <typename... Args>
bool seekLessThan(Args... args) {
int cmp = seek(args...);
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if (cmp < 0 || (cmp == 0 && node != nullptr)) {
movePrev();
}
return _hideDeletedBackward();
}
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template <typename... Args>
bool seekLessThanOrEqual(Args... args) {
int cmp = seek(args...);
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if (cmp < 0) {
movePrev();
}
return _hideDeletedBackward();
}
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template <typename... Args>
bool seekGreaterThan(Args... args) {
int cmp = seek(args...);
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if (cmp > 0 || (cmp == 0 && node != nullptr)) {
moveNext();
}
return _hideDeletedForward();
}
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template <typename... Args>
bool seekGreaterThanOrEqual(Args... args) {
int cmp = seek(args...);
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if (cmp > 0) {
moveNext();
}
return _hideDeletedForward();
}
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// seek() moves the cursor to a node containing s or the node that would be the parent of s if s were to be
// added to the tree. If the tree was empty, the cursor will be invalid and the return value will be 0.
// Otherwise, returns the result of s.compare(item at cursor position)
// Does not skip/avoid deleted nodes.
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int seek(const T& s, int skipLen = 0) {
DecodedNode* n = mirror->root;
node = nullptr;
int cmp = 0;
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while (n != nullptr) {
node = n;
cmp = s.compare(n->item, skipLen);
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if (cmp == 0) {
break;
}
n = (cmp > 0) ? n->getRightChild(mirror->arena) : n->getLeftChild(mirror->arena);
}
return cmp;
}
// Same usage as seek() but with a hint of a cursor, which can't be null, whose starting position
// should be close to s in the tree to improve seek time.
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// initialCmp should be logically equivalent to s.compare(pHint->get()) or 0, in which
// case the comparison will be done in this method.
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// TODO: This is broken, it's not faster than not using a hint. See Make thisUnfortunately in a microbenchmark
// attempting to approximate a common use case, this version of using a cursor hint is actually slower than not
// using a hint.
int seek(const T& s, int skipLen, const Cursor* pHint, int initialCmp = 0) {
DecodedNode* n = mirror->root;
node = nullptr;
int cmp;
// If there's a hint position, use it
// At the end of using the hint, if n is valid it should point to a node which has not yet been compared to.
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if (pHint->node != nullptr) {
n = pHint->node;
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if (initialCmp == 0) {
initialCmp = s.compare(pHint->get());
}
cmp = initialCmp;
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while (true) {
node = n;
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if (cmp == 0) {
return cmp;
}
// Attempt to jump up and past s
bool othersChild = false;
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n = (initialCmp > 0) ? n->jumpUpNext(mirror->root, othersChild)
: n->jumpUpPrev(mirror->root, othersChild);
if (n == nullptr) {
n = (cmp > 0) ? node->rightChild : node->leftChild;
break;
}
// Compare s to the node jumped to
cmp = s.compare(n->item, skipLen);
// n is on the oposite side of s than node is, then n is too far.
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if (cmp != 0 && ((initialCmp ^ cmp) < 0)) {
if (!othersChild) {
n = (cmp < 0) ? node->rightChild : node->leftChild;
}
break;
}
}
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} else {
// Start at root, clear current position
n = mirror->root;
node = nullptr;
cmp = 0;
}
// Search starting from n, which is either the root or the result of applying the hint
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while (n != nullptr) {
node = n;
cmp = s.compare(n->item, skipLen);
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if (cmp == 0) {
break;
}
n = (cmp > 0) ? n->getRightChild(mirror->arena) : n->getLeftChild(mirror->arena);
}
return cmp;
}
bool moveFirst() {
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DecodedNode* n = mirror->root;
node = n;
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while (n != nullptr) {
n = n->getLeftChild(mirror->arena);
if (n != nullptr)
node = n;
}
return _hideDeletedForward();
}
bool moveLast() {
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DecodedNode* n = mirror->root;
node = n;
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while (n != nullptr) {
n = n->getRightChild(mirror->arena);
if (n != nullptr)
node = n;
}
return _hideDeletedBackward();
}
// Try to move to next node, sees deleted nodes.
void _moveNext() {
// Try to go right
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DecodedNode* n = node->getRightChild(mirror->arena);
// If we couldn't go right, then the answer is our next ancestor
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if (n == nullptr) {
node = node->getNextAncestor();
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} else {
// Go left as far as possible
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while (n != nullptr) {
node = n;
n = n->getLeftChild(mirror->arena);
}
}
}
// Try to move to previous node, sees deleted nodes.
void _movePrev() {
// Try to go left
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DecodedNode* n = node->getLeftChild(mirror->arena);
// If we couldn't go left, then the answer is our prev ancestor
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if (n == nullptr) {
node = node->getPrevAncestor();
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} else {
// Go right as far as possible
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while (n != nullptr) {
node = n;
n = n->getRightChild(mirror->arena);
}
}
}
bool moveNext() {
_moveNext();
return _hideDeletedForward();
}
bool movePrev() {
_movePrev();
return _hideDeletedBackward();
}
private:
bool _hideDeletedBackward() {
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while (node != nullptr && node->isDeleted()) {
_movePrev();
}
return node != nullptr;
}
bool _hideDeletedForward() {
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while (node != nullptr && node->isDeleted()) {
_moveNext();
}
return node != nullptr;
}
};
// Returns number of bytes written
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int build(int spaceAvailable, const T* begin, const T* end, const T* prev, const T* next) {
largeNodes = spaceAvailable > SmallSizeLimit;
int count = end - begin;
numItems = count;
nodeBytesDeleted = 0;
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initialHeight = count ? (uint8_t)log2(count) + 1 : 0;
maxHeight = 0;
// The boundary leading to the new page acts as the last time we branched right
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if (begin != end) {
nodeBytesUsed = buildSubtree(root(), begin, end, prev, next, prev->getCommonPrefixLen(*next, 0));
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} else {
nodeBytesUsed = 0;
}
nodeBytesFree = spaceAvailable - size();
return size();
}
private:
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int buildSubtree(Node& node, const T* begin, const T* end, const T* prev, const T* next, int subtreeCommon) {
// printf("build: %s to %s\n", begin->toString().c_str(), (end - 1)->toString().c_str());
// printf("build: root at %p Node::headerSize %d delta at %p \n", &root, Node::headerSize(largeNodes),
// &node.delta(largeNodes));
ASSERT(end != begin);
int count = end - begin;
// Find key to be stored in root
int mid = perfectSubtreeSplitPointCached(count);
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const T& item = begin[mid];
int commonWithPrev = item.getCommonPrefixLen(*prev, subtreeCommon);
int commonWithNext = item.getCommonPrefixLen(*next, subtreeCommon);
bool prefixSourcePrev;
int commonPrefix;
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const T* base;
if (commonWithPrev >= commonWithNext) {
prefixSourcePrev = true;
commonPrefix = commonWithPrev;
base = prev;
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} else {
prefixSourcePrev = false;
commonPrefix = commonWithNext;
base = next;
}
int deltaSize = item.writeDelta(node.delta(largeNodes), *base, commonPrefix);
node.delta(largeNodes).setPrefixSource(prefixSourcePrev);
deltatree_printf("Serialized %s to offset %d data: %s\n",
item.toString().c_str(),
(uint8_t*)&node - (uint8_t*)this,
StringRef((uint8_t*)&node.delta(largeNodes), deltaSize).toHexString().c_str());
// Continue writing after the serialized Delta.
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uint8_t* wptr = (uint8_t*)&node.delta(largeNodes) + deltaSize;
// Serialize left child
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if (count > 1) {
wptr += buildSubtree(*(Node*)wptr, begin, begin + mid, prev, &item, commonWithPrev);
node.setLeftChildOffset(largeNodes, Node::headerSize(largeNodes) + deltaSize);
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} else {
node.setLeftChildOffset(largeNodes, 0);
}
// Serialize right child
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if (count > 2) {
node.setRightChildOffset(largeNodes, wptr - (uint8_t*)&node);
wptr += buildSubtree(*(Node*)wptr, begin + mid + 1, end, &item, next, commonWithNext);
} else {
node.setRightChildOffset(largeNodes, 0);
}
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return wptr - (uint8_t*)&node;
}
};
// ------------------------------------------------------------------
#pragma pack(push, 1)
template <typename T, typename DeltaT = typename T::Delta>
struct DeltaTree2 {
typedef typename T::Partial Partial;
struct {
uint16_t numItems; // Number of items in the tree.
uint32_t nodeBytesUsed; // Bytes used by nodes (everything after the tree header)
uint32_t nodeBytesFree; // Bytes left at end of tree to expand into
uint32_t nodeBytesDeleted; // Delta bytes deleted from tree. Note that some of these bytes could be borrowed by
// descendents.
uint8_t initialHeight; // Height of tree as originally built
uint8_t maxHeight; // Maximum height of tree after any insertion. Value of 0 means no insertions done.
bool largeNodes; // Node size, can be calculated as capacity > SmallSizeLimit but it will be used a lot
};
struct Node {
// Offsets are relative to the start of the tree
union {
struct {
uint32_t leftChild;
uint32_t rightChild;
uint32_t leftParent;
uint32_t rightParent;
} largeOffsets;
struct {
uint16_t leftChild;
uint16_t rightChild;
uint16_t leftParent;
uint16_t rightParent;
} smallOffsets;
};
static int headerSize(bool large) { return large ? sizeof(largeOffsets) : sizeof(smallOffsets); }
// Delta is located after the offsets, which differs by node size
DeltaT& delta(bool large) { return large ? *(DeltaT*)(&largeOffsets + 1) : *(DeltaT*)(&smallOffsets + 1); };
// Delta is located after the offsets, which differs by node size
const DeltaT& delta(bool large) const {
return large ? *(DeltaT*)(&largeOffsets + 1) : *(DeltaT*)(&smallOffsets + 1);
};
std::string toString(DeltaTree2* tree) const {
return format("Node{offset=%d leftChild=%d rightChild=%d leftParent=%d rightParent=%d delta=%s}",
tree->nodeOffset(this),
getLeftChildOffset(tree->largeNodes),
getRightChildOffset(tree->largeNodes),
getLeftParentOffset(tree->largeNodes),
getRightParentOffset(tree->largeNodes),
delta(tree->largeNodes).toString().c_str());
}
#define getMember(m) (large ? largeOffsets.m : smallOffsets.m)
#define setMember(m, v) \
if (large) { \
largeOffsets.m = v; \
} else { \
smallOffsets.m = v; \
}
void setRightChildOffset(bool large, int offset) { setMember(rightChild, offset); }
void setLeftChildOffset(bool large, int offset) { setMember(leftChild, offset); }
void setRightParentOffset(bool large, int offset) { setMember(rightParent, offset); }
void setLeftParentOffset(bool large, int offset) { setMember(leftParent, offset); }
int getRightChildOffset(bool large) const { return getMember(rightChild); }
int getLeftChildOffset(bool large) const { return getMember(leftChild); }
int getRightParentOffset(bool large) const { return getMember(rightParent); }
int getLeftParentOffset(bool large) const { return getMember(leftParent); }
int size(bool large) const { return delta(large).size() + headerSize(large); }
#undef getMember
#undef setMember
};
static constexpr int SmallSizeLimit = std::numeric_limits<uint16_t>::max();
static constexpr int LargeTreePerNodeExtraOverhead = sizeof(Node::largeOffsets) - sizeof(Node::smallOffsets);
#pragma pack(pop)
int nodeOffset(const Node* n) const { return (uint8_t*)n - (uint8_t*)this; }
Node* nodeAt(int offset) { return offset == 0 ? nullptr : (Node*)((uint8_t*)this + offset); }
Node* root() { return numItems == 0 ? nullptr : (Node*)(this + 1); }
int size() const { return sizeof(DeltaTree2) + nodeBytesUsed; }
int capacity() const { return size() + nodeBytesFree; }
Node& newNode() { return *(Node*)((uint8_t*)this + size()); }
public:
struct DecodeCache : FastAllocated<DecodeCache> {
DecodeCache(const T& lowerBound = T(), const T& upperBound = T())
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: lowerBound(arena, lowerBound), upperBound(arena, upperBound) {
partials.reserve(10);
printf("size: %d\n", sizeof(OffsetPartial));
}
Arena arena;
T lowerBound;
T upperBound;
std::unordered_map<int, Optional<typename T::Partial>> partials;
Optional<typename T::Partial>& get(int offset) { return partials[offset]; }
void clear() {
partials.clear();
Arena a;
lowerBound = T(a, lowerBound);
upperBound = T(a, upperBound);
arena = a;
}
};
// Cursor provides a way to seek into a DeltaTree and iterate over its contents
// The cursor needs a DeltaTree pointer and a DecodeCache, which can be shared
// with other DeltaTrees which were incrementally modified to produce the the
// tree that this cursor is referencing.
struct Cursor {
Cursor() : cache(nullptr), node(nullptr) {}
Cursor(DecodeCache* cache, DeltaTree2* tree) : cache(cache), tree(tree) { node = tree->root(); }
DeltaTree2* tree;
DecodeCache* cache;
Node* node;
std::string toString() const {
return format("Cursor{tree=%p cache=%p node=%s item=%s",
tree,
cache,
node == nullptr ? "null" : node->toString(tree).c_str(),
node == nullptr ? "" : get().toString().c_str());
}
bool valid() const { return node != nullptr; }
// Get T for Node n, and provide to n's delta the base and local decode cache entries to use/modify
const T get(Node* n) const {
DeltaT& delta = n->delta(tree->largeNodes);
// If this node's cache is populated, then the delta can create T from that alone
Optional<Partial>& c = cache->get(tree->nodeOffset(n));
if (c.present()) {
return delta.apply(c.get());
}
// Otherwise, get the base T
bool basePrev = delta.getPrefixSource();
int baseOffset =
basePrev ? n->getLeftParentOffset(tree->largeNodes) : n->getRightParentOffset(tree->largeNodes);
// If baseOffset is 0, then base T is DecodeCache's lower or upper bound
if (baseOffset == 0) {
return delta.apply(cache->arena, basePrev ? cache->lowerBound : cache->upperBound, c);
}
T base = get(tree->nodeAt(baseOffset));
return delta.apply(cache->arena, base, cache->get(tree->nodeOffset(n)));
}
const T get() const { return get(node); }
// const tT getOrUpperBound() const { return valid() ? node->item : *mirror->upperBound(); }
bool operator==(const Cursor& rhs) const { return node == rhs.node; }
bool operator!=(const Cursor& rhs) const { return node != rhs.node; }
// The seek methods, of the form seek[Less|Greater][orEqual](...) are very similar.
// They attempt move the cursor to the [Greatest|Least] item, based on the name of the function.
// Then will not "see" erased records.
// If successful, they return true, and if not then false a while making the cursor invalid.
// These methods forward arguments to the seek() overloads, see those for argument descriptions.
template <typename... Args>
bool seekLessThan(Args... args) {
int cmp = seek(args...);
if (cmp < 0 || (cmp == 0 && node != nullptr)) {
movePrev();
}
return _hideDeletedBackward();
}
template <typename... Args>
bool seekLessThanOrEqual(Args... args) {
int cmp = seek(args...);
if (cmp < 0) {
movePrev();
}
return _hideDeletedBackward();
}
template <typename... Args>
bool seekGreaterThan(Args... args) {
int cmp = seek(args...);
if (cmp > 0 || (cmp == 0 && node != nullptr)) {
moveNext();
}
return _hideDeletedForward();
}
template <typename... Args>
bool seekGreaterThanOrEqual(Args... args) {
int cmp = seek(args...);
if (cmp > 0) {
moveNext();
}
return _hideDeletedForward();
}
// seek() moves the cursor to a node containing s or the node that would be the parent of s if s were to be
// added to the tree. If the tree was empty, the cursor will be invalid and the return value will be 0.
// Otherwise, returns the result of s.compare(item at cursor position)
// Does not skip/avoid deleted nodes.
int seek(const T& s, int skipLen = 0) {
node = nullptr;
deltatree_printf("seek(%s) start %s\n", s.toString().c_str(), toString().c_str());
Node* n = tree->root();
int cmp = 0;
while (n != nullptr) {
node = n;
cmp = s.compare(get(), skipLen);
deltatree_printf("seek(%s) move %s cmp=%d\n", s.toString().c_str(), toString().c_str(), cmp);
if (cmp == 0) {
break;
}
n = (cmp > 0) ? tree->nodeAt(n->getRightChildOffset(tree->largeNodes))
: tree->nodeAt(n->getLeftChildOffset(tree->largeNodes));
}
return cmp;
}
bool moveFirst() {
Node* n = tree->root();
node = n;
deltatree_printf("moveFirst start %s\n", toString().c_str());
while (n != nullptr) {
n = tree->nodeAt(n->getLeftChildOffset(tree->largeNodes));
if (n != nullptr) {
node = n;
deltatree_printf("moveFirst move %s\n", toString().c_str());
}
}
return _hideDeletedForward();
}
bool moveLast() {
Node* n = tree->root();
node = n;
deltatree_printf("moveLast start %s\n", toString().c_str());
while (n != nullptr) {
n = tree->nodeAt(n->getRightChildOffset(tree->largeNodes));
if (n != nullptr) {
node = n;
deltatree_printf("moveLast move %s\n", toString().c_str());
}
}
return _hideDeletedBackward();
}
// Try to move to next node, sees deleted nodes.
void _moveNext() {
deltatree_printf("_moveNext start %s\n", toString().c_str());
// Try to go right
Node* n = tree->nodeAt(node->getRightChildOffset(tree->largeNodes));
// If we couldn't go right, then the answer is our next ancestor
if (n == nullptr) {
node = tree->nodeAt(node->getRightParentOffset(tree->largeNodes));
deltatree_printf("_moveNext move1 %s\n", toString().c_str());
} else {
// Go left as far as possible
do {
node = n;
deltatree_printf("_moveNext move2 %s\n", toString().c_str());
n = tree->nodeAt(n->getLeftChildOffset(tree->largeNodes));
} while (n != nullptr);
}
}
// Try to move to previous node, sees deleted nodes.
void _movePrev() {
deltatree_printf("_movePrev start %s\n", toString().c_str());
// Try to go left
Node* n = tree->nodeAt(node->getLeftChildOffset(tree->largeNodes));
// If we couldn't go left, then the answer is our prev ancestor
if (n == nullptr) {
node = tree->nodeAt(node->getLeftParentOffset(tree->largeNodes));
deltatree_printf("_movePrev move1 %s\n", toString().c_str());
} else {
// Go right as far as possible
do {
node = n;
deltatree_printf("_movePrev move2 %s\n", toString().c_str());
n = tree->nodeAt(n->getRightChildOffset(tree->largeNodes));
} while (n != nullptr);
}
}
bool moveNext() {
_moveNext();
return _hideDeletedForward();
}
bool movePrev() {
_movePrev();
return _hideDeletedBackward();
}
bool isErased() const { return node->delta(tree->largeNodes).getDeleted(); }
// Erase current item by setting its deleted flag to true.
// Tree header is updated if a change is made.
void erase() {
auto& delta = node->delta(tree->largeNodes);
if (!delta.getDeleted()) {
delta.setDeleted(true);
--tree->numItems;
tree->nodeBytesDeleted += (delta.size() + Node::headerSize(tree->largeNodes));
}
}
// Un-erase current item by setting its deleted flag to false.
// Tree header is updated if a change is made.
void unErase() {
auto& delta = node->delta(tree->largeNodes);
if (delta.getDeleted()) {
delta.setDeleted(false);
++tree->numItems;
tree->nodeBytesDeleted -= (delta.size() + Node::headerSize(tree->largeNodes));
}
}
// Erase k by setting its deleted flag to true. Returns true only if k existed
bool erase(const T& k, int skipLen = 0) {
Cursor c = *this;
if (c.seek(k, skipLen) == 0 && !c.isErased()) {
c.erase();
return true;
}
return false;
}
// Try to insert k into the DeltaTree, updating byte counts and initialHeight if they
// have changed (they won't if k already exists in the tree but was deleted).
// Returns true if successful, false if k does not fit in the space available
// or if k is already in the tree (and was not already deleted).
// Insertion on an empty tree returns false as well.
bool insert(const T& k, int skipLen = 0, int maxHeightAllowed = std::numeric_limits<int>::max()) {
deltatree_printf("insert %s\n", k.toString().c_str());
if (tree->numItems == 0) {
return false;
}
Cursor c = *this;
int height = 0;
// TODO: Inline seek here to add height output
int cmp = c.seek(k, skipLen);
Node* parent = c.node;
// If the item is found, mark it erased if it isn't already
if (cmp == 0) {
if (c.isErased()) {
c.unErase();
return true;
}
return false;
}
if (height > maxHeightAllowed) {
return false;
}
Node& child = tree->newNode();
int childOffset = tree->nodeOffset(&child);
// If k > c then k becomes c's right child
bool addingRight = cmp > 0;
int leftParentOffset, rightParentOffset;
// Point either the right or left child of c to the new node
// Set parent pointers for n
if (addingRight) {
// parent is the new node's left parent since n is the right child of parent
leftParentOffset = tree->nodeOffset(parent);
rightParentOffset = parent->getRightParentOffset(tree->largeNodes);
} else {
// parent is the new node's right parent since n is the left child of parent
leftParentOffset = parent->getLeftParentOffset(tree->largeNodes);
rightParentOffset = tree->nodeOffset(parent);
}
T leftBase = leftParentOffset == 0 ? cache->lowerBound : get(tree->nodeAt(leftParentOffset));
T rightBase = rightParentOffset == 0 ? cache->upperBound : get(tree->nodeAt(rightParentOffset));
int common = leftBase.getCommonPrefixLen(rightBase, skipLen);
int commonWithLeftParent = k.getCommonPrefixLen(leftBase, common);
int commonWithRightParent = k.getCommonPrefixLen(rightBase, common);
bool borrowFromLeft = commonWithLeftParent >= commonWithRightParent;
const T& base = borrowFromLeft ? leftBase : rightBase;
int commonPrefix = borrowFromLeft ? commonWithLeftParent : commonWithRightParent;
int deltaSize = k.deltaSize(base, commonPrefix, false);
int nodeSpace = deltaSize + Node::headerSize(tree->largeNodes);
if (nodeSpace > tree->nodeBytesFree) {
return false;
}
if (addingRight) {
parent->setRightChildOffset(tree->largeNodes, childOffset);
} else {
parent->setLeftChildOffset(tree->largeNodes, childOffset);
}
child.setLeftParentOffset(tree->largeNodes, leftParentOffset);
child.setRightParentOffset(tree->largeNodes, rightParentOffset);
child.setRightChildOffset(tree->largeNodes, 0);
child.setLeftChildOffset(tree->largeNodes, 0);
DeltaT& childDelta = child.delta(tree->largeNodes);
int written = k.writeDelta(childDelta, base, commonPrefix);
ASSERT(deltaSize == written);
childDelta.setPrefixSource(borrowFromLeft);
tree->nodeBytesUsed += nodeSpace;
tree->nodeBytesFree -= nodeSpace;
++tree->numItems;
// Update max height of the tree if necessary
if (height > tree->maxHeight) {
tree->maxHeight = height;
}
return true;
}
private:
bool _hideDeletedBackward() {
while (node != nullptr && node->delta(tree->largeNodes).getDeleted()) {
_movePrev();
}
return node != nullptr;
}
bool _hideDeletedForward() {
while (node != nullptr && node->delta(tree->largeNodes).getDeleted()) {
_moveNext();
}
return node != nullptr;
}
};
// Returns number of bytes written
int build(int spaceAvailable, const T* begin, const T* end, const T* lowerBound, const T* upperBound) {
largeNodes = spaceAvailable > SmallSizeLimit;
int count = end - begin;
numItems = count;
nodeBytesDeleted = 0;
initialHeight = (uint8_t)log2(count) + 1;
maxHeight = 0;
// The boundary leading to the new page acts as the last time we branched right
if (count > 0) {
nodeBytesUsed = buildSubtree(
*root(), begin, end, lowerBound, upperBound, 0, 0, lowerBound->getCommonPrefixLen(*upperBound, 0));
} else {
nodeBytesUsed = 0;
}
nodeBytesFree = spaceAvailable - size();
return size();
}
private:
int buildSubtree(Node& node,
const T* begin,
const T* end,
const T* leftParent,
const T* rightParent,
int leftParentOffset,
int rightParentOffset,
int subtreeCommon) {
int count = end - begin;
// Find key to be stored in root
int mid = perfectSubtreeSplitPointCached(count);
const T& item = begin[mid];
int commonWithPrev = item.getCommonPrefixLen(*leftParent, subtreeCommon);
int commonWithNext = item.getCommonPrefixLen(*rightParent, subtreeCommon);
bool prefixSourcePrev;
int commonPrefix;
const T* base;
if (commonWithPrev >= commonWithNext) {
prefixSourcePrev = true;
commonPrefix = commonWithPrev;
base = leftParent;
} else {
prefixSourcePrev = false;
commonPrefix = commonWithNext;
base = rightParent;
}
int deltaSize = item.writeDelta(node.delta(largeNodes), *base, commonPrefix);
node.delta(largeNodes).setPrefixSource(prefixSourcePrev);
// Continue writing after the serialized Delta.
uint8_t* wptr = (uint8_t*)&node.delta(largeNodes) + deltaSize;
int leftChildOffset;
// Serialize left subtree
if (count > 1) {
leftChildOffset = wptr - (uint8_t*)this;
deltatree_printf("%p: offset=%d count=%d serialize left subtree leftChildOffset=%d\n",
this,
nodeOffset(&node),
count,
leftChildOffset);
wptr += buildSubtree(*(Node*)wptr,
begin,
begin + mid,
leftParent,
&item,
leftParentOffset,
nodeOffset(&node),
commonWithPrev);
} else {
leftChildOffset = 0;
}
int rightChildOffset;
// Serialize right subtree
if (count > 2) {
rightChildOffset = wptr - (uint8_t*)this;
deltatree_printf("%p: offset=%d count=%d serialize right subtree rightChildOffset=%d\n",
this,
nodeOffset(&node),
count,
rightChildOffset);
wptr += buildSubtree(*(Node*)wptr,
begin + mid + 1,
end,
&item,
rightParent,
nodeOffset(&node),
rightParentOffset,
commonWithNext);
} else {
rightChildOffset = 0;
}
node.setLeftChildOffset(largeNodes, leftChildOffset);
node.setRightChildOffset(largeNodes, rightChildOffset);
node.setLeftParentOffset(largeNodes, leftParentOffset);
node.setRightParentOffset(largeNodes, rightParentOffset);
deltatree_printf("%p: Serialized %s as %s\n", this, item.toString().c_str(), node.toString(this).c_str());
return wptr - (uint8_t*)&node;
}
};