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Fix bug in flattening script

This commit is contained in:
Gustaf Ahdritz 2022-08-09 23:44:30 -04:00
parent 8881b210f6
commit fc7bb8a37a
1 changed files with 1 additions and 3 deletions
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4
scripts/flatten_roda.sh
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@ -27,9 +27,7 @@ for chain_dir in $(ls "${RODA_DIR}"); do
CHAIN_DIR_PATH="${RODA_DIR}/${chain_dir}"
for subdir in $(ls "${CHAIN_DIR_PATH}"); do
if [[ $subdir = "pdb" ]] || [[ $subdir = "cif" ]]; then
CHAIN_DATA_DIR="${DATA_DIR}/${chain_dir}"
mkdir -p "${CHAIN_DATA_DIR}"
mv "${CHAIN_DIR_PATH}/${subdir}"/* "${CHAIN_DATA_DIR}"
mv "${CHAIN_DIR_PATH}/${subdir}"/* "${DATA_DIR}"
else
CHAIN_ALIGNMENT_DIR="${ALIGNMENT_DIR}/${chain_dir}"
mkdir -p "${CHAIN_ALIGNMENT_DIR}"