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136 Commits

Author SHA1 Message Date
joseph.lizier cce93f2d18 Moving (only) unit test for the mixed calculators package to reflect the package move 2014-04-17 11:21:12 +00:00
joseph.lizier 926f22992e Added unit tests for conditional TE continuous calculators. 
Added some more tests for TE Kraskov also.
 2014-04-17 06:00:54 +00:00
joseph.lizier 7d95954c55 Patched bug in interface for old Kernel AIs calculator (now in unit tests) 2014-04-08 11:27:10 +00:00
joseph.lizier 9cad2737af Added unit tests for TransferEntropyCalculatorMultiVariateViaCondMutualInfo and derived classes for Kraskov and Gaussian estimators. 2014-04-08 11:21:40 +00:00
joseph.lizier b81ccccee1 Added unit tests for TransferEntropyCalculatorViaCondMutualInfo implementations: Gaussian simply tests the computeStartAndEndTimePairs; Kraskov tests against TRENTOOL. 2014-04-07 05:33:30 +00:00
joseph.lizier 1827ec23c2 Fixed lack of initialisation of MI calculators in Kraskov MI unit tests 2014-03-26 05:09:20 +00:00
joseph.lizier 3e017d1be4 Added unit tests for Rearchitecting Active Info Storage calculators to use a common parent class for data collection. Mainly includes testing kernel AIS calculator against the older direct implementation of this (which is now moved into the unit test area only) 2014-03-26 04:07:13 +00:00
joseph.lizier 5d0934bd85 Updating unit tests to reflect changes to discrete MI calculator and method of generating random permutations. 2013-10-22 04:06:58 +00:00
joseph.lizier 6fe22e39cb Added unit tests for new method generateRandomPerturbations(int, int) in RandomGenerator, and for sortIndices(double[]) method to MatrixUtils 2013-10-18 00:45:46 +00:00
joseph.lizier 1d5ae4a176 Added unit test for bug fix to computeSignificance() of ConditionalMutualInformationCalculator, simply to make sure it doesn't throw an exception 2013-10-17 13:20:42 +00:00
joseph.lizier 9c03691c09 Predictive information calculator unit tests added 2013-08-13 04:33:45 +00:00
joseph.lizier 1c0e9098cc Extra unit test for Issue 16 2013-07-06 18:36:03 +00:00
joseph.lizier bc218e291c Added new unit test for Kraskov MI calculator against MILCA for large 10000 data points of dimension 5 in each x and y; added unit tests for digamma 2013-03-07 12:50:03 +00:00
joseph.lizier cb2e0a2588 New unit tests for covariance calculation (inside conditional MI linear Gaussian), making analytic linear Gaussian signficance tests take the number of observations into account 2013-03-04 06:11:43 +00:00
joseph.lizier 4671b15d61 Added more unit tests for Kraskov conditional MI against TRENTOOL (here for multivariate data, run with TRENTOOL as univariate TE but with history lengths k=2, l=2) 2013-01-22 03:37:42 +00:00
joseph.lizier 111055fc81 Added unit tests for Kraskov Conditional MI against TEs computed by Wibral et al.'s TRENTOOL 2013-01-16 11:54:13 +00:00
joseph.lizier 40e7d4b211 Added common unit tests for conditional MI calculators, and added implementations of the tests for Kraskov and Gaussian conditional MI calculators 2013-01-14 12:57:01 +00:00
joseph.lizier 74ba272f41 Added unit test for covariance 2013-01-08 05:38:22 +00:00
joseph.lizier 8fe32003ab Adding more unit testing on Kraskov MI, including for dependent data sets 2012-12-20 13:23:52 +00:00
joseph.lizier b0bc89dcb1 Made the unit tests for Kraskov MI more streamlined; added unit test for multivariate MI 2012-12-20 10:40:42 +00:00
joseph.lizier 90c0f5a105 Renaming abstract unit test classes inside java files (missed these in previous commit) 2012-12-18 10:57:44 +00:00
joseph.lizier 74ebf27fa0 Renaming abstract unit test classes inside java files 2012-12-18 10:53:03 +00:00
joseph.lizier 653b511c24 Renaming abstract unit test classes as first step to avoid ant file running them (next commit will update names inside java files) 2012-12-18 10:51:30 +00:00
joseph.lizier 23f7f84eaa Added common functionality for unit testing multivariate MI calculators into an abstract class. 
Added basic tester for Kraskov multivariate MI, including verifying against Kraskov MILCA tool
 2012-12-18 10:34:41 +00:00
joseph.lizier a6e09c7fc4 Pulled some common functionality for testing multivariate TE calculators into an abstract class. 
Added basic tester for Kraskov multivariate TE
 2012-12-13 14:50:33 +00:00
joseph.lizier b64b0c091d Adding unit tester for TECalculatorMultiVariateKernel 2012-12-13 12:27:42 +00:00
joseph.lizier aa991901f6 Adding 3x XOR test case for MI discrete 2012-09-05 06:37:13 +00:00
joseph.lizier 65c7ac49a6 Adding folder for testing discrete calculators; 
First version of unit tests for MI discrete
 2012-09-05 06:24:47 +00:00
joseph.lizier 4a19b41a76 Adding tests for determinant via Cholesky decomposition, and more tests for MI by Gaussian method 2012-08-17 07:30:08 +00:00
joseph.lizier e79dc34efb Added unit tests for MICalculatorMultiVariateWithDiscreteGaussian 2012-08-16 06:10:19 +00:00
joseph.lizier af37fdf621 Added MatrixUtilsText (pulled some tests out of MathsUtilsTest which should have been here) 
Added more tests for MI MultiVariate Gaussain
 2012-08-16 05:42:49 +00:00
joseph.lizier 7159ecd4cc Adding unit tests for MI Kernel and Gaussian calculators, to check that their average calculations do not change across calls to compute the statistical significance (where we clone the calculator to handle the surrogates). 2012-08-07 07:34:24 +00:00
joseph.lizier 4b3c84cd22 Added test for Cholesky decomposition, inversion of symmetric positive-definite matrices, and normal PDF/CDF 2012-08-06 07:45:50 +00:00
joseph.lizier 364ebfeff7 Changing name of unit test for Gaussian Entropy calculator internally to file (step 2/2) 2012-08-01 12:18:31 +00:00
joseph.lizier 7bdac9542d Changing name of unit test for Gaussian Entropy calculator 2012-08-01 12:15:16 +00:00
joseph.lizier eee753bc0b Adding unit tests for Chi Square distribution in MathsUtils and for Entropy Calculator Gaussian 2012-08-01 12:14:24 +00:00