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<p>Copyright (C) 2012-2014 <a href="http://lizier.me/joseph/">Joseph T. Lizier</a>; 2014-2015 <a href="http://lizier.me/joseph/">Joseph T. Lizier</a> and Ipek Özdemir</p>
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<p><em>JIDT</em> provides a stand-alone, open-source code Java implementation (also usable in <a href="../../wiki/UseInOctaveMatlab">Matlab, Octave</a>, <a href="../../wiki/UseInPython">Python</a>, <a href="../../wiki/UseInR">R</a>, <a href="../../wiki/UseInJulia">Julia</a> and <a href="../../wiki/UseInClojure">Clojure</a>) of information-theoretic measures of distributed computation in complex systems: i.e. information storage, transfer and modification.</p>
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<p><em>JIDT</em> provides a stand-alone, open-source code Java implementation (also usable in <a href="https://github.com/jlizier/jidt/wiki/UseInOctaveMatlab">Matlab, Octave</a>, <a href="https://github.com/jlizier/jidt/wiki/UseInPython">Python</a>, <a href="https://github.com/jlizier/jidt/wiki/UseInR">R</a>, <a href="https://github.com/jlizier/jidt/wiki/UseInJulia">Julia</a> and <a href="https://github.com/jlizier/jidt/wiki/UseInClojure">Clojure</a>) of information-theoretic measures of distributed computation in complex systems: i.e. information storage, transfer and modification.</p>
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<p>JIDT includes implementations:</p>
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<ol>
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<li>
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<a href="../../wiki/Downloads">Download</a> and <a href="../../wiki/Installation">Installation</a> is very easy!
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<a href="https://github.com/jlizier/jidt/wiki/Downloads">Download</a> and <a href="https://github.com/jlizier/jidt/wiki/Installation">Installation</a> is very easy!
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<ol>
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<li>
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</ol>
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</li>
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<li>
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<a href="../../wiki/Documentation">Documentation</a> including: the paper describing JIDT at <a href="http://arxiv.org/abs/1408.3270">arXiv:1408.3270</a> (distributed with the toolkit), a <a href="../../wiki/Tutorial">Tutorial</a>, and <a href="http://lizier.me/joseph/software/jidt/javadocs/v1.3/">Javadocs (v1.3 here)</a>;</li>
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<a href="https://github.com/jlizier/jidt/wiki/Documentation">Documentation</a> including: the paper describing JIDT at <a href="http://arxiv.org/abs/1408.3270">arXiv:1408.3270</a> (distributed with the toolkit), a <a href="https://github.com/jlizier/jidt/wiki/Tutorial">Tutorial</a>, and <a href="http://lizier.me/joseph/software/jidt/javadocs/v1.3/">Javadocs (v1.3 here)</a>;</li>
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<li>
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<a href="../../wiki/Demos">Demos</a> are included with the full distribution, including a <a href="../../wiki/AutoAnalyser">GUI app</a> for automatic analysis and code generation, <a href="../../wiki/SimpleJavaExamples">simple java demos</a> and <a href="../../wiki/CellularAutomataDemos">cellular automata (CA) demos</a>.
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<a href="https://github.com/jlizier/jidt/wiki/Demos">Demos</a> are included with the full distribution, including a <a href="https://github.com/jlizier/jidt/wiki/AutoAnalyser">GUI app</a> for automatic analysis and code generation, <a href="https://github.com/jlizier/jidt/wiki/SimpleJavaExamples">simple java demos</a> and <a href="https://github.com/jlizier/jidt/wiki/CellularAutomataDemos">cellular automata (CA) demos</a>.
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<ol>
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<li>These Java tools can easily be used in <a href="../../wiki/OctaveMatlabExamples">Matlab/Octave</a>, <a href="../../wiki/PythonExamples">Python</a>, <a href="../../wiki/R_Examples">R</a>, <a href="../../wiki/JuliaExamples">Julia</a> and <a href="../../wiki/Clojure_Examples">Clojure</a>! (click on each language here for examples)</li>
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<li>These Java tools can easily be used in <a href="https://github.com/jlizier/jidt/wiki/OctaveMatlabExamples">Matlab/Octave</a>, <a href="https://github.com/jlizier/jidt/wiki/PythonExamples">Python</a>, <a href="https://github.com/jlizier/jidt/wiki/R_Examples">R</a>, <a href="https://github.com/jlizier/jidt/wiki/JuliaExamples">Julia</a> and <a href="https://github.com/jlizier/jidt/wiki/Clojure_Examples">Clojure</a>! (click on each language here for examples)</li>
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</ol>
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</li>
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</ol>
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<ul>
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<li>Join our discussion group: <a href="http://groups.google.com/d/forum/jidt-discuss">http://groups.google.com/d/forum/jidt-discuss</a>
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</li>
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<li>See also the <a href="../../wiki/FAQs">FAQs</a>
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<li>See also the <a href="https://github.com/jlizier/jidt/wiki/FAQs">FAQs</a>
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</li>
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<li>Follow <a href="http://twitter.com/infodynamicstkt">@infodynamicstkt</a> on twitter</li>
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</ul>
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<p>And please <a href="mailto:joseph.lizier_AT_gmail.com">let me know</a> about any publications resulting from its use!</p>
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<p>See other <a href="../../wiki/PublicationsUsingThisToolkit">PublicationsUsingThisToolkit</a>.</p>
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<p>See other <a href="https://github.com/jlizier/jidt/wiki/PublicationsUsingThisToolkit">PublicationsUsingThisToolkit</a>.</p>
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<h1>
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<a id="news" class="anchor" href="#news" aria-hidden="true"><span class="octicon octicon-link"></span></a>News</h1>
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<p><em>11/9/2013</em> - New jar and full distribution files available for v0.1.4; added scripts to generate CA figures for 2013 book chapters; added general Java demo code; added Python demo code; made Octave/Matlab demos and CA demos properly compatible for Matlab; added extra Octave/Matlab general demos; added more unit tests for MI and conditional MI calculators, including against results from Wibral's TRENTOOL; bug fixes.</p>
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<p><em>11/9/2013</em> - New CA demo scripts for several review book chapters we're preparing in 2013 have been uploaded - see <a href="../../wiki/CellularAutomataDemos">CellularAutomataDemos</a>.</p>
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<p><em>11/9/2013</em> - New CA demo scripts for several review book chapters we're preparing in 2013 have been uploaded - see <a href="https://github.com/jlizier/jidt/wiki/CellularAutomataDemos">CellularAutomataDemos</a>.</p>
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<p><em>4/6/2013</em> - Added instructions on how to <a href="../../wiki/UseInPython">use in python</a> and several <a href="../../wiki/PythonExamples">PythonExamples</a>.</p>
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<p><em>4/6/2013</em> - Added instructions on how to <a href="https://github.com/jlizier/jidt/wiki/UseInPython">use in python</a> and several <a href="https://github.com/jlizier/jidt/wiki/PythonExamples">PythonExamples</a>.</p>
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<p><em>13/01/2013</em> - New jar and full distribution files available for v0.1.3; existing Octave/Matlab demo code made compatible with Matlab; several bug fixes, including using max norm by default in Kraskov calculator (instead of requiring this to be set explicitly); more unit tests (including against results from Kraskov's own MI implementation)</p>
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