From ed5011e588596febdd0d3936a08d6dda7170739c Mon Sep 17 00:00:00 2001
From: sjplimp <sjplimp@f3b2605a-c512-4ea7-a41b-209d697bcdaa>
Date: Tue, 7 Jan 2014 18:31:05 +0000
Subject: [PATCH] git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11152
 f3b2605a-c512-4ea7-a41b-209d697bcdaa

---
 doc/molecule.html | 8 +++++++-
 doc/molecule.txt  | 8 +++++++-
 2 files changed, 14 insertions(+), 2 deletions(-)

diff --git a/doc/molecule.html b/doc/molecule.html
index 0f73a4647a..5014f93ab6 100644
--- a/doc/molecule.html
+++ b/doc/molecule.html
@@ -261,6 +261,8 @@ appears, the Special Bond Counts section must also appear.  If this
 section is not specied, the atoms in the molecule will have no special
 bonds.
 </P>
+<HR>
+
 <P><I>Shake Flags</I> section:
 </P>
 <UL><LI>one line per atom
@@ -281,6 +283,8 @@ clusters.
 <LI>3 = part of a 3-atom SHAKE cluster with two bonds
 <LI>4 = part of a 4-atom SHAKE cluster with three bonds 
 </UL>
+<HR>
+
 <P><I>Shake Atoms</I> section:
 </P>
 <UL><LI>one line per atom
@@ -315,11 +319,13 @@ and b,c,d = IDs of other three atoms bonded to the central atom.
 <P>See the <A HREF = "fix_shake.html">fix shake</A> doc page for a further description
 of SHAKE clusters.
 </P>
+<HR>
+
 <P><I>Shake Bond Types</I> section:
 </P>
 <UL><LI>one line per atom
 <LI>line syntax: ID a b c
-<LI>a,b,c = bond types of bonds in cluster 
+<LI>a,b,c = bond types (or angle type) of bonds (or angle) in cluster 
 </UL>
 <P>This section is only needed when molecules created using the template
 will be constrained by SHAKE via the "fix shake" command.  The other
diff --git a/doc/molecule.txt b/doc/molecule.txt
index 24871ec0dc..6df436200c 100644
--- a/doc/molecule.txt
+++ b/doc/molecule.txt
@@ -258,6 +258,8 @@ appears, the Special Bond Counts section must also appear.  If this
 section is not specied, the atoms in the molecule will have no special
 bonds.
 
+:line
+
 {Shake Flags} section:
 
 one line per atom
@@ -278,6 +280,8 @@ clusters.
 3 = part of a 3-atom SHAKE cluster with two bonds
 4 = part of a 4-atom SHAKE cluster with three bonds :ul
 
+:line
+
 {Shake Atoms} section:
 
 one line per atom
@@ -312,11 +316,13 @@ and b,c,d = IDs of other three atoms bonded to the central atom.
 See the "fix shake"_fix_shake.html doc page for a further description
 of SHAKE clusters.
 
+:line
+
 {Shake Bond Types} section:
 
 one line per atom
 line syntax: ID a b c
-a,b,c = bond types of bonds in cluster :ul
+a,b,c = bond types (or angle type) of bonds (or angle) in cluster :ul
 
 This section is only needed when molecules created using the template
 will be constrained by SHAKE via the "fix shake" command.  The other