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git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3294 f3b2605a-c512-4ea7-a41b-209d697bcdaa

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sjplimp 2009-11-02 20:59:05 +00:00
parent 2bd42f6fc6
commit 8b7d3712b5
4 changed files with 12 additions and 4 deletions
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6
doc/pair_cmm.html
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@ -53,7 +53,7 @@ given by
<CENTER><IMG SRC = "Eqs/pair_cmm.jpg">
</CENTER>
<P>as required for the CMM Coarse-grained MD parametrization discussed in
<A HREF = "#Shinoda">(Shinoda)</A>. Rc is the cutoff.
<A HREF = "#Shinoda">(Shinoda)</A> and <A HREF = "#DeVane">(DeVane)</A>. Rc is the cutoff.
</P>
<P>Style <I>cg/cmm/coul/cut</I> adds a Coulombic pairwise interaction given by
</P>
@ -167,4 +167,8 @@ pages for workarounds on this issue.
<P><B>(Shinoda)</B> Shinoda, DeVane, Klein, Mol Sim, 33, 27 (2007).
</P>
<A NAME = "DeVane"></A>
<P><B>(DeVane)</B> Shinoda, DeVane, Klein, Soft Matter, 4, 2453-2462 (2008).
</P>
</HTML>

6
doc/pair_cmm.txt
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@ -47,7 +47,7 @@ given by
:c,image(Eqs/pair_cmm.jpg)
as required for the CMM Coarse-grained MD parametrization discussed in
"(Shinoda)"_#Shinoda. Rc is the cutoff.
"(Shinoda)"_#Shinoda and "(DeVane)"_#DeVane. Rc is the cutoff.
Style {cg/cmm/coul/cut} adds a Coulombic pairwise interaction given by
@ -159,3 +159,7 @@ pages for workarounds on this issue.
:link(Shinoda)
[(Shinoda)] Shinoda, DeVane, Klein, Mol Sim, 33, 27 (2007).
:link(DeVane)
[(DeVane)] Shinoda, DeVane, Klein, Soft Matter, 4, 2453-2462 (2008).

2
doc/reset_timestep.html
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@ -59,7 +59,7 @@ temperature which ramps from Tstart to Tstop which may persist over
several runs. If you change the timestep, you may change the target
temperature.
</P>
<P>Restting the timestep will clear the flags for <A HREF = "compute.html">computes</A>
<P>Resetting the timestep will clear the flags for <A HREF = "compute.html">computes</A>
that may have calculated some quantity from a previous run. This
means that quantity cannot be accessed by a variable in between runs
until a new run is performed. See the <A HREF = "variable.html">variable</A>

2
doc/reset_timestep.txt
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@ -56,7 +56,7 @@ temperature which ramps from Tstart to Tstop which may persist over
several runs. If you change the timestep, you may change the target
temperature.
Restting the timestep will clear the flags for "computes"_compute.html
Resetting the timestep will clear the flags for "computes"_compute.html
that may have calculated some quantity from a previous run. This
means that quantity cannot be accessed by a variable in between runs
until a new run is performed. See the "variable"_variable.html