diff --git a/doc/Section_commands.txt b/doc/Section_commands.txt index 4a8d83d524..7e5c8312cf 100644 --- a/doc/Section_commands.txt +++ b/doc/Section_commands.txt @@ -375,6 +375,7 @@ in the command's documentation. "shape"_shape.html, "shell"_shell.html, "special_bonds"_special_bonds.html, +"tad"_tad.html, "temper"_temper.html, "thermo"_thermo.html, "thermo_modify"_thermo_modify.html, diff --git a/doc/Section_howto.txt b/doc/Section_howto.txt index 8b8324fa8b..4a953ed378 100644 --- a/doc/Section_howto.txt +++ b/doc/Section_howto.txt @@ -341,11 +341,12 @@ These are the relevant commands: "neb"_neb.html for nudged elastic band calculations "prd"_prd.html for parallel replica dynamics +"tad"_tad.html for temperature accelerated dynamics :ul "temper"_temper.html for parallel tempering :ul NEB is a method for finding transition states and barrier energies. -PRD is a method for performing accelerated dynamics to find and -perform infrequent events. Parallel tempering or replica exchange +PRD and TAD are methods for performing accelerated dynamics to find +and perform infrequent events. Parallel tempering or replica exchange runs different replicas at a series of temperature to facilitate rare-event sampling. diff --git a/doc/Section_intro.txt b/doc/Section_intro.txt index d59497a9d2..e4c26c8aab 100644 --- a/doc/Section_intro.txt +++ b/doc/Section_intro.txt @@ -216,6 +216,7 @@ Multi-replica models :h4 "nudged elastic band"_neb.html "parallel replica dynamics"_prd.html +"temperature accelerated dynamics"_tad.html "parallel tempering"_temper.html Pre- and post-processing :h4