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@ -171,7 +171,7 @@ index (the second term in the effective potential above). The
quasi-beads also interact with the two neighboring quasi-beads through quasi-beads also interact with the two neighboring quasi-beads through
the spring potential in imaginary-time space (first term in effective the spring potential in imaginary-time space (first term in effective
potential). To sample the canonical ensemble, a Nose-Hoover massive potential). To sample the canonical ensemble, a Nose-Hoover massive
chain thermostat is applied <a class="reference internal" href="run_style.html#tuckerman"><span class="std std-ref">(Tuckerman)</span></a>. With the chain thermostat is applied <a class="reference internal" href="#pimd-tuckerman"><span class="std std-ref">(Tuckerman)</span></a>. With the
massive chain algorithm, a chain of NH thermostats is coupled to each massive chain algorithm, a chain of NH thermostats is coupled to each
degree of freedom for each quasi-bead. The keyword <em>temp</em> sets the degree of freedom for each quasi-bead. The keyword <em>temp</em> sets the
target temperature for the system and the keyword <em>nhc</em> sets the target temperature for the system and the keyword <em>nhc</em> sets the
@ -271,7 +271,7 @@ and nhc = 2.</p>
<hr class="docutils" /> <hr class="docutils" />
<p id="feynman"><strong>(Feynman)</strong> R. Feynman and A. Hibbs, Chapter 7, Quantum Mechanics and <p id="feynman"><strong>(Feynman)</strong> R. Feynman and A. Hibbs, Chapter 7, Quantum Mechanics and
Path Integrals, McGraw-Hill, New York (1965).</p> Path Integrals, McGraw-Hill, New York (1965).</p>
<p id="tuckerman"><strong>(Tuckerman)</strong> M. Tuckerman and B. Berne, J Chem Phys, 99, 2796 (1993).</p> <p id="pimd-tuckerman"><strong>(Tuckerman)</strong> M. Tuckerman and B. Berne, J Chem Phys, 99, 2796 (1993).</p>
<p id="cao1"><strong>(Cao1)</strong> J. Cao and B. Berne, J Chem Phys, 99, 2902 (1993).</p> <p id="cao1"><strong>(Cao1)</strong> J. Cao and B. Berne, J Chem Phys, 99, 2902 (1993).</p>
<p id="cao2"><strong>(Cao2)</strong> J. Cao and G. Voth, J Chem Phys, 100, 5093 (1994).</p> <p id="cao2"><strong>(Cao2)</strong> J. Cao and G. Voth, J Chem Phys, 100, 5093 (1994).</p>
<p id="hone"><strong>(Hone)</strong> T. Hone, P. Rossky, G. Voth, J Chem Phys, 124, <p id="hone"><strong>(Hone)</strong> T. Hone, P. Rossky, G. Voth, J Chem Phys, 124,