LAMMPS WWW Site - LAMMPS Documentation - LAMMPS Commands

pair_style dpd command

Syntax:

pair_style dpd T cutoff seed 

Examples:

pair_style dpd 1.0 2.5 34387
pair_coeff * * 3.0 1.0
pair_coeff 1 1 3.0 1.0 1.0 

Description:

Style dpd computes a force field for dissipative particle dynamics (DPD) following the exposition in (Groot). The force on atom I due to atom J is given as a sum of 3 terms

where Fc is a conservative force, Fd is a dissipative force, and Fr is a random force. Rij is a unit vector in the direction Ri - Rj, Vij is the vector difference in velocities of the two atoms = Vi - Vj, alpha is a Gaussian random number with zero mean and unit variance, dt is the timestep size, and w(r) is a weighting factor that varies between 0 and 1. Rc is the cutoff. Sigma is set equal to sqrt(2 T gamma), where T is a parameter in the pair_style command.

The pairwise energy associated with this potential is only due to the conservative force term Fc.

The following coefficients must be defined for each pair of atoms types via the pair_coeff command as in the examples above, or in the data file or restart files read by the read_data or read_restart commands:

The last coefficient is optional. If not specified, the global DPD cutoff is used. Note that sigma is set equal to sqrt(2 T gamma), where T is the temperature set by the pair_style command so it does not need to be specified.


Mixing, shift, table, tail correction, restart, rRESPA info:

This pair style does not support mixing. Thus, coefficients for all I,J pairs must be specified explicitly.

This pair style does not support the pair_modify shift option for the energy of the pair interaction.

The pair_modify table option is not relevant for this pair style.

This pair style does not support the pair_modify tail option for adding long-range tail corrections to energy and pressure.

This pair style writes its information to binary restart files, so pair_style and pair_coeff commands do not need to be specified in an input script that reads a restart file. Note that the user-specified random number seed is stored in the restart file, so when a simulation is restarted, each processor will re-initialize its random number generator the same way it did initially. This means the random forces will be random, but will not be the same as they would have been if the original simulation had continued past the restart time.

This pair style can only be used via the pair keyword of the run_style respa command. It does not support the inner, middle, outer keywords.


Restrictions:

This style is part of the "dpd" package. It is only enabled if LAMMPS was built with that package. See the Making LAMMPS section for more info.

The default frequency for rebuilding neighbor lists is every 10 steps (see the neigh_modify command). This may be too infrequent for DPD simulations since particles move rapidly and can overlap by large amounts. If this setting yields a non-zero number of "dangerous" reneighborings (printed at the end of a simulation), you should experiment with forcing reneighboring more often and see if system energies/trajectories change.

Related commands:

pair_coeff

Default: none


(Groot) Groot and Warren, J Chem Phys, 107, 4423-35 (1997).