lammps/lib/atc
sjplimp ccefc1c3c0 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3509 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-12-04 21:04:00 +00:00
..
ATC_Error.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
ATC_HardyKernel.cpp git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
ATC_HardyKernel.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
ATC_Transfer.cpp git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3509 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-12-04 21:04:00 +00:00
ATC_Transfer.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3509 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-12-04 21:04:00 +00:00
ATC_TransferHardy.cpp git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
ATC_TransferHardy.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
ATC_TransferThermal.cpp git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3509 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-12-04 21:04:00 +00:00
ATC_TransferThermal.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
ATC_TransferUtility.cpp git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
ATC_TypeDefs.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
Array.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
Array2D.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
AtomicRegulator.cpp git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
AtomicRegulator.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
CG.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
CloneVector.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
DenseMatrix.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
DenseVector.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
DiagonalMatrix.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
ElasticTimeIntegrator.cpp git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
ElasticTimeIntegrator.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
ElectronFlux.cpp git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
ElectronFlux.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
ElectronHeatCapacity.cpp git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
ElectronHeatCapacity.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
ElectronHeatFlux.cpp git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
ElectronHeatFlux.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
ElectronPhononExchange.cpp git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
ElectronPhononExchange.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
ExtrinsicModel.cpp git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
ExtrinsicModel.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
ExtrinsicModelTwoTemperature.cpp git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
ExtrinsicModelTwoTemperature.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
FE_Element.cpp git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
FE_Element.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
FE_Engine.cpp git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
FE_Engine.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
FE_Mesh.cpp git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
FE_Mesh.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
FieldEulerIntegrator.cpp git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
FieldEulerIntegrator.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
GMRES.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
ImplicitSolveOperator.cpp git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
ImplicitSolveOperator.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
Kinetostat.cpp git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
Kinetostat.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
LammpsInterface.cpp git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3509 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-12-04 21:04:00 +00:00
LammpsInterface.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
Makefile.g++ git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
Makefile.icc git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
Makefile.serial git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
Material.cpp git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
Material.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
Matrix.cpp git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
Matrix.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
MatrixDef.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
MatrixLibrary.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
OutputManager.cpp git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
OutputManager.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
PhysicsModel.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
PhysicsModelThermal.cpp git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
PhysicsModelThermal.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
PhysicsModelTwoTemperature.cpp git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
PhysicsModelTwoTemperature.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
PrescribedDataManager.cpp git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
PrescribedDataManager.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
Quadrature.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
README git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3185 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-28 16:32:09 +00:00
Solver.cpp git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
Solver.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
SparseMatrix-inl.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
SparseMatrix.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
SparseVector-inl.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
SparseVector.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
StringManip.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
Thermostat.cpp git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
Thermostat.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
TimeFilter.cpp git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
TimeFilter.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
TimeIntegrator.cpp git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
TimeIntegrator.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
Utility.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
Vector.cpp git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
Vector.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
XT_Function.cpp git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00
XT_Function.h git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3170 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-24 16:33:23 +00:00

README

ATC (Atom To Continuum methods)

Reese Jones, Jeremy Templeton, Jonathan Zimmerman (Sandia National Labs)
rjones, jatempl, jzimmer at sandia.gov
September 2009

--------------

This is version 1.0 of the ATC library, which provides continuum field
estimation and molecular dynamics-finite element coupling methods.

This library must be built with a C++ compiler, before LAMMPS is
built, so LAMMPS can link against it.

Build the library using one of the provided Makefiles or creating your
own, specific to your compiler and system.  For example:

make -f Makefile.g++

Note that the ATC library makes MPI calls, so you must build it with
the same MPI library that is used to build LAMMPS, e.g. as specified
by settings in the lammps/src/MAKE/Makefile.foo file.

If the build is successful, you should end up with a libatc.a file.

When you build LAMMPS with this library, you must insure that the
settings in the lo-level Makefile (in lammps/src/MAKE) are correct for
user-atc-SYSLIB and user-atc_SYSLIBPATH, so the the appropriate BLAS
and LAPACK libraries on your system can be linked against.