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<title>pair_style brownian command — LAMMPS 15 May 2015 version documentation</title>
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<li>pair_style brownian command</li>
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<div class="section" id="pair-style-brownian-command">
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<span id="index-0"></span><h1>pair_style brownian command<a class="headerlink" href="#pair-style-brownian-command" title="Permalink to this headline">¶</a></h1>
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</div>
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<div class="section" id="pair-style-brownian-omp-command">
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<h1>pair_style brownian/omp command<a class="headerlink" href="#pair-style-brownian-omp-command" title="Permalink to this headline">¶</a></h1>
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</div>
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<div class="section" id="pair-style-brownian-poly-command">
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<h1>pair_style brownian/poly command<a class="headerlink" href="#pair-style-brownian-poly-command" title="Permalink to this headline">¶</a></h1>
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</div>
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<div class="section" id="pair-style-brownian-poly-omp-command">
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<h1>pair_style brownian/poly/omp command<a class="headerlink" href="#pair-style-brownian-poly-omp-command" title="Permalink to this headline">¶</a></h1>
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<div class="section" id="syntax">
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<h2>Syntax<a class="headerlink" href="#syntax" title="Permalink to this headline">¶</a></h2>
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<div class="highlight-python"><div class="highlight"><pre>pair_style style mu flaglog flagfld cutinner cutoff t_target seed flagHI flagVF
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</pre></div>
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</div>
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<ul class="simple">
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<li>style = <em>brownian</em> or <em>brownian/poly</em></li>
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<li>mu = dynamic viscosity (dynamic viscosity units)</li>
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<li>flaglog = 0/1 log terms in the lubrication approximation on/off</li>
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<li>flagfld = 0/1 to include/exclude Fast Lubrication Dynamics effects</li>
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<li>cutinner = inner cutoff distance (distance units)</li>
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<li>cutoff = outer cutoff for interactions (distance units)</li>
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<li>t_target = target temp of the system (temperature units)</li>
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<li>seed = seed for the random number generator (positive integer)</li>
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<li>flagHI (optional) = 0/1 to include/exclude 1/r hydrodynamic interactions</li>
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<li>flagVF (optional) = 0/1 to include/exclude volume fraction corrections in the long-range isotropic terms</li>
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</ul>
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</div>
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<div class="section" id="examples">
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<h2>Examples<a class="headerlink" href="#examples" title="Permalink to this headline">¶</a></h2>
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<div class="highlight-python"><div class="highlight"><pre>pair_style brownian 1.5 1 1 2.01 2.5 2.0 5878567 (assuming radius = 1)
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pair_coeff 1 1 2.05 2.8
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pair_coeff * *
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</pre></div>
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</div>
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</div>
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<div class="section" id="description">
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<h2>Description<a class="headerlink" href="#description" title="Permalink to this headline">¶</a></h2>
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<p>Styles <em>brownian</em> and <em>brownain/poly</em> compute Brownian forces and
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torques on finite-size particles. The former requires monodisperse
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spherical particles; the latter allows for polydisperse spherical
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particles.</p>
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<p>These pair styles are designed to be used with either the <a class="reference internal" href="pair_lubricate.html"><em>pair_style lubricate</em></a> or <a class="reference internal" href="pair_lubricateU.html"><em>pair_style lubricateU</em></a> commands to provide thermostatting
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when dissipative lubrication forces are acting. Thus the parameters
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<em>mu</em>, <em>flaglog</em>, <em>flagfld</em>, <em>cutinner</em>, and <em>cutoff</em> should be
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specified consistent with the settings in the lubrication pair styles.
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For details, refer to either of the lubrication pair styles.</p>
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<p>The <em>t_target</em> setting is used to specify the target temperature of
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the system. The random number <em>seed</em> is used to generate random
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numbers for the thermostatting procedure.</p>
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<p>The <em>flagHI</em> and <em>flagVF</em> settings are optional. Neither should be
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used, or both must be defined.</p>
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<hr class="docutils" />
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<p>The following coefficients must be defined for each pair of atoms
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types via the <a class="reference internal" href="pair_coeff.html"><em>pair_coeff</em></a> command as in the examples
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above, or in the data file or restart files read by the
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<a class="reference internal" href="read_data.html"><em>read_data</em></a> or <a class="reference internal" href="read_restart.html"><em>read_restart</em></a>
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commands, or by mixing as described below:</p>
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<ul class="simple">
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<li>cutinner (distance units)</li>
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<li>cutoff (distance units)</li>
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</ul>
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<p>The two coefficients are optional. If neither is specified, the two
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cutoffs specified in the pair_style command are used. Otherwise both
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must be specified.</p>
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<hr class="docutils" />
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<p>Styles with a <em>cuda</em>, <em>gpu</em>, <em>intel</em>, <em>kk</em>, <em>omp</em>, or <em>opt</em> suffix are
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functionally the same as the corresponding style without the suffix.
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They have been optimized to run faster, depending on your available
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hardware, as discussed in <a class="reference internal" href="Section_accelerate.html"><em>this section</em></a> of
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the manual. The accelerated styles take the same arguments and should
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produce the same results, except for round-off and precision issues.</p>
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<p>These accelerated styles are part of the USER-CUDA, GPU, USER-INTEL,
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KOKKOS, USER-OMP and OPT packages, respectively. They are only
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enabled if LAMMPS was built with those packages. See the <a class="reference internal" href="Section_start.html#start-3"><span>Making LAMMPS</span></a> section for more info.</p>
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<p>You can specify the accelerated styles explicitly in your input script
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by including their suffix, or you can use the <a class="reference internal" href="Section_start.html#start-7"><span>-suffix command-line switch</span></a> when you invoke LAMMPS, or you can
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use the <a class="reference internal" href="suffix.html"><em>suffix</em></a> command in your input script.</p>
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<p>See <a class="reference internal" href="Section_accelerate.html"><em>this section</em></a> of the manual for more
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instructions on how to use the accelerated styles effectively.</p>
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<hr class="docutils" />
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<p><strong>Mixing, shift, table, tail correction, restart, rRESPA info</strong>:</p>
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<p>For atom type pairs I,J and I != J, the two cutoff distances for this
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pair style can be mixed. The default mix value is <em>geometric</em>. See
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the “pair_modify” command for details.</p>
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<p>This pair style does not support the <a class="reference internal" href="pair_modify.html"><em>pair_modify</em></a>
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shift option for the energy of the pair interaction.</p>
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<p>The <a class="reference internal" href="pair_modify.html"><em>pair_modify</em></a> table option is not relevant
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for this pair style.</p>
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<p>This pair style does not support the <a class="reference internal" href="pair_modify.html"><em>pair_modify</em></a>
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tail option for adding long-range tail corrections to energy and
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pressure.</p>
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<p>This pair style writes its information to <a class="reference internal" href="restart.html"><em>binary restart files</em></a>, so pair_style and pair_coeff commands do not need
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to be specified in an input script that reads a restart file.</p>
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<p>This pair style can only be used via the <em>pair</em> keyword of the
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<a class="reference internal" href="run_style.html"><em>run_style respa</em></a> command. It does not support the
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<em>inner</em>, <em>middle</em>, <em>outer</em> keywords.</p>
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</div>
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<hr class="docutils" />
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<div class="section" id="restrictions">
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<h2>Restrictions<a class="headerlink" href="#restrictions" title="Permalink to this headline">¶</a></h2>
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<p>These styles are part of the FLD package. They are only enabled if
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LAMMPS was built with that package. See the <span class="xref std std-ref">Making LAMMPS</span> section for more info.</p>
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<p>Only spherical monodisperse particles are allowed for pair_style
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brownian.</p>
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<p>Only spherical particles are allowed for pair_style brownian/poly.</p>
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</div>
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<div class="section" id="related-commands">
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<h2>Related commands<a class="headerlink" href="#related-commands" title="Permalink to this headline">¶</a></h2>
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<p><a class="reference internal" href="pair_coeff.html"><em>pair_coeff</em></a>, <a class="reference internal" href="pair_lubricate.html"><em>pair_style lubricate</em></a>, <a class="reference internal" href="pair_lubricateU.html"><em>pair_style lubricateU</em></a></p>
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</div>
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<div class="section" id="default">
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<h2>Default<a class="headerlink" href="#default" title="Permalink to this headline">¶</a></h2>
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<p>The default settings for the optional args are flagHI = 1 and flagVF =
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1.</p>
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