forked from lijiext/lammps
84 lines
2.6 KiB
Groff
84 lines
2.6 KiB
Groff
LAMMPS (16 Mar 2018)
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OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (../comm.cpp:90)
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using 1 OpenMP thread(s) per MPI task
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# bulk Ni in MEAM
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units metal
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atom_style atomic
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lattice fcc 3.52
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Lattice spacing in x,y,z = 3.52 3.52 3.52
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region box block 0 20 0 20 0 20
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create_box 1 box
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Created orthogonal box = (0 0 0) to (70.4 70.4 70.4)
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1 by 2 by 2 MPI processor grid
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create_atoms 1 box
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Created 32000 atoms
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Time spent = 0.00058651 secs
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pair_style meam/c
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pair_coeff * * library.meam Ni4 Ni.meam Ni4
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velocity all create 1600.0 376847 loop geom
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neighbor 1.0 bin
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neigh_modify delay 5 every 1
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fix 1 all nve
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timestep 0.005
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thermo 50
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run 100
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Neighbor list info ...
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update every 1 steps, delay 5 steps, check yes
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max neighbors/atom: 2000, page size: 100000
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master list distance cutoff = 5
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ghost atom cutoff = 5
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binsize = 2.5, bins = 29 29 29
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2 neighbor lists, perpetual/occasional/extra = 2 0 0
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(1) pair meam/c, perpetual
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attributes: full, newton on
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pair build: full/bin/atomonly
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stencil: full/bin/3d
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bin: standard
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(2) pair meam/c, perpetual, half/full from (1)
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attributes: half, newton on
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pair build: halffull/newton
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stencil: none
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bin: none
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Per MPI rank memory allocation (min/avg/max) = 17.41 | 17.41 | 17.41 Mbytes
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Step Temp E_pair E_mol TotEng Press
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0 1600 -142400 0 -135782.09 20259.18
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50 885.10702 -139411.51 0 -135750.54 32425.431
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100 895.50973 -139454.3 0 -135750.3 31804.185
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Loop time of 6.45947 on 4 procs for 100 steps with 32000 atoms
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Performance: 6.688 ns/day, 3.589 hours/ns, 15.481 timesteps/s
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98.0% CPU use with 4 MPI tasks x 1 OpenMP threads
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MPI task timing breakdown:
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Section | min time | avg time | max time |%varavg| %total
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---------------------------------------------------------------
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Pair | 6.22 | 6.2385 | 6.265 | 0.7 | 96.58
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Neigh | 0.12657 | 0.12691 | 0.12721 | 0.1 | 1.96
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Comm | 0.052339 | 0.07915 | 0.097897 | 5.9 | 1.23
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Output | 9.7752e-05 | 0.0001151 | 0.00016594 | 0.0 | 0.00
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Modify | 0.010194 | 0.010291 | 0.010442 | 0.1 | 0.16
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Other | | 0.004529 | | | 0.07
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Nlocal: 8000 ave 8045 max 7947 min
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Histogram: 1 0 0 1 0 0 0 1 0 1
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Nghost: 6066.75 ave 6120 max 6021 min
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Histogram: 1 0 1 0 0 0 1 0 0 1
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Neighs: 195090 ave 196403 max 193697 min
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Histogram: 1 0 0 1 0 0 0 1 0 1
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FullNghs: 390180 ave 392616 max 387490 min
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Histogram: 1 0 0 1 0 0 0 1 0 1
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Total # of neighbors = 1560720
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Ave neighs/atom = 48.7725
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Neighbor list builds = 8
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Dangerous builds = 0
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Total wall time: 0:00:06
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