forked from lijiext/lammps
66 lines
3.1 KiB
Groff
66 lines
3.1 KiB
Groff
LAMMPS (1 Feb 2019)
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OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:87)
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using 1 OpenMP thread(s) per MPI task
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Lattice spacing in x,y,z = 4.43 4.43 4.43
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Created orthogonal box = (0 0 0) to (88.6 88.6 88.6)
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1 by 2 by 2 MPI processor grid
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Created 32000 atoms
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Time spent = 0.000893 secs
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WARNING: KIM Model does not provide `partialParticleEnergy'; energy per atom will be zero (src/KIM/pair_kim.cpp:1097)
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WARNING: KIM Model does not provide `partialParticleVirial'; virial per atom will be zero (src/KIM/pair_kim.cpp:1102)
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WARNING: KIM Model does not provide `partialParticleEnergy'; energy per atom will be zero (src/KIM/pair_kim.cpp:1097)
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WARNING: KIM Model does not provide `partialParticleVirial'; virial per atom will be zero (src/KIM/pair_kim.cpp:1102)
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WARNING: KIM Model does not provide `partialParticleEnergy'; energy per atom will be zero (src/KIM/pair_kim.cpp:1097)
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WARNING: KIM Model does not provide `partialParticleVirial'; virial per atom will be zero (src/KIM/pair_kim.cpp:1102)
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WARNING: KIM Model does not provide `partialParticleEnergy'; energy per atom will be zero (src/KIM/pair_kim.cpp:1097)
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WARNING: KIM Model does not provide `partialParticleVirial'; virial per atom will be zero (src/KIM/pair_kim.cpp:1102)
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Neighbor list info ...
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update every 1 steps, delay 0 steps, check yes
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max neighbors/atom: 2000, page size: 100000
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master list distance cutoff = 8.45
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ghost atom cutoff = 8.45
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binsize = 4.225, bins = 21 21 21
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1 neighbor lists, perpetual/occasional/extra = 1 0 0
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(1) pair kim, perpetual
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attributes: full, newton off, cut 8.45
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pair build: full/bin/atomonly
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stencil: full/bin/3d
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bin: standard
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Setting up Verlet run ...
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Unit style : metal
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Current step : 0
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Time step : 0.001
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Per MPI rank memory allocation (min/avg/max) = 9.789 | 9.789 | 9.789 Mbytes
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Step Temp E_pair E_mol TotEng Press
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0 200 6290.8194 0 7118.0584 129712.25
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100 95.179725 6718.814 0 7112.496 133346.59
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Loop time of 0.903182 on 4 procs for 100 steps with 32000 atoms
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Performance: 9.566 ns/day, 2.509 hours/ns, 110.720 timesteps/s
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99.6% CPU use with 4 MPI tasks x 1 OpenMP threads
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MPI task timing breakdown:
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Section | min time | avg time | max time |%varavg| %total
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---------------------------------------------------------------
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Pair | 0.76173 | 0.76349 | 0.76597 | 0.2 | 84.53
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Neigh | 0.088773 | 0.088938 | 0.089074 | 0.0 | 9.85
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Comm | 0.032018 | 0.03452 | 0.03638 | 0.9 | 3.82
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Output | 4e-05 | 4.425e-05 | 5.2e-05 | 0.0 | 0.00
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Modify | 0.009278 | 0.0093917 | 0.009528 | 0.1 | 1.04
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Other | | 0.006797 | | | 0.75
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Nlocal: 8000 ave 8018 max 7967 min
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Histogram: 1 0 0 0 0 0 1 0 0 2
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Nghost: 9131 ave 9164 max 9113 min
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Histogram: 2 0 0 1 0 0 0 0 0 1
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Neighs: 0 ave 0 max 0 min
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Histogram: 4 0 0 0 0 0 0 0 0 0
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FullNghs: 1.06344e+06 ave 1.06594e+06 max 1.05881e+06 min
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Histogram: 1 0 0 0 0 0 1 0 0 2
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Total # of neighbors = 4253750
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Ave neighs/atom = 132.93
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Neighbor list builds = 3
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Dangerous builds = 0
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Total wall time: 0:00:00
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