forked from lijiext/lammps
41 lines
1.7 KiB
Plaintext
41 lines
1.7 KiB
Plaintext
"Higher level section"_Howto.html - "LAMMPS WWW Site"_lws - "LAMMPS
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Documentation"_ld - "LAMMPS Commands"_lc :c
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:link(lws,http://lammps.sandia.gov)
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:link(ld,Manual.html)
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:link(lc,Commands_all.html)
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:line
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Visualize LAMMPS snapshots :h3
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LAMMPS itself does not do visualization, but snapshots from LAMMPS
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simulations can be visualized (and analyzed) in a variety of ways.
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Mention dump image and dump movie.
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LAMMPS snapshots are created by the "dump"_dump.html command which can
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create files in several formats. The native LAMMPS dump format is a
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text file (see "dump atom" or "dump custom") which can be visualized
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by several popular visualization tools. The "dump
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image"_dump_image.html and "dump movie"_dump_image.html styles can
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output internally rendered images and convert a sequence of them to a
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movie during the MD run. Several programs included with LAMMPS as
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auxiliary tools can convert between LAMMPS format files and other
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formats. See the "Tools"_Tools.html doc page for details.
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A Python-based toolkit distributed by our group can read native LAMMPS
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dump files, including custom dump files with additional columns of
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user-specified atom information, and convert them to various formats
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or pipe them into visualization software directly. See the "Pizza.py
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WWW site"_pizza for details. Specifically, Pizza.py can convert
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LAMMPS dump files into PDB, XYZ, "Ensight"_ensight, and VTK formats.
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Pizza.py can pipe LAMMPS dump files directly into the Raster3d and
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RasMol visualization programs. Pizza.py has tools that do interactive
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3d OpenGL visualization and one that creates SVG images of dump file
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snapshots.
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:link(pizza,http://www.sandia.gov/~sjplimp/pizza.html)
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:link(ensight,http://www.ensight.com)
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:link(atomeye,http://mt.seas.upenn.edu/Archive/Graphics/A)
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