forked from lijiext/lammps
336 lines
20 KiB
Groff
336 lines
20 KiB
Groff
thermo_modify format float %22.16g
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units lj
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dimension 2
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atom_style atomic
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lattice sq2 0.8442
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Lattice spacing in x,y,z = 1.53919 1.53919 1.53919
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region box block 0 20 0 20 -0.1 0.1
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create_box 1 box
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Created orthogonal box = (0 0 -0.153919) to (30.7838 30.7838 0.153919)
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2 by 2 by 1 MPI processor grid
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thermo_style custom step temp pe pxx pyy pxy
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WARNING: New thermo_style command, previous thermo_modify settings will be lost (../output.cpp:664)
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create_atoms 1 box
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Created 800 atoms
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mass 1 1.0
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velocity all create 5.0 87287 loop geom
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pair_style lj/cut 2.5
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pair_coeff 1 1 1.0 1.0 2.5
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pair_modify shift yes
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neighbor 0.3 bin
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neigh_modify delay 0 every 1 check yes
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fix 1 all nve
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fix 2 all enforce2d
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thermo 100
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run 1000
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Memory usage per processor = 2.06131 Mbytes
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Step Temp PotEng Pxx Pyy Pxy
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0 5 -2.461717 4.8446721 5.1934297 -0.021185605
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100 3.2788864 -0.74311698 15.13728 16.688385 -0.13039086
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200 3.3041082 -0.77000277 15.112653 16.092652 -0.15719124
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300 3.3840228 -0.84859211 15.866192 14.510214 0.43596695
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400 3.3916063 -0.85694601 15.440117 15.327588 -0.40886736
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500 3.3136052 -0.77935264 15.526339 16.140252 0.14800908
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600 3.3888915 -0.85213742 15.009217 15.3163 0.2544259
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700 3.2123632 -0.67641807 16.052563 16.56862 -0.40174504
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800 3.3016497 -0.76571656 15.797225 15.48117 -0.066795543
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900 3.4621454 -0.9260857 14.547941 14.997988 0.52470514
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1000 3.2803075 -0.74465936 16.254614 15.41658 -0.58853939
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Loop time of 0.150018 on 4 procs for 1000 steps with 800 atoms
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Pair time (%) = 0.0741317 (49.4152)
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Neigh time (%) = 0.0260313 (17.3521)
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Comm time (%) = 0.0371104 (24.7373)
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Outpt time (%) = 0.000306547 (0.20434)
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Other time (%) = 0.0124381 (8.29105)
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Nlocal: 200 ave 202 max 198 min
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Histogram: 1 0 1 0 0 0 0 1 0 1
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Nghost: 170.25 ave 176 max 167 min
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Histogram: 1 0 2 0 0 0 0 0 0 1
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Neighs: 1936.75 ave 1963 max 1896 min
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Histogram: 1 0 0 0 0 1 0 0 1 1
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Total # of neighbors = 7747
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Ave neighs/atom = 9.68375
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Neighbor list builds = 203
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Dangerous builds = 0
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neigh_modify delay 0 every 1 check yes
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velocity all create 0.0 1
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thermo 50
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minimize 1.0e-6 0.001 1000 10000
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Memory usage per processor = 2.75261 Mbytes
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Step Temp PotEng Pxx Pyy Pxy
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1000 0 -0.74465936 13.356463 12.783183 -0.38683262
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1050 0 -2.8198371 -1.1342845 -1.0864736 0.038082467
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1100 0 -2.8554989 -1.0568419 -1.1603959 0.013709853
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1150 0 -2.8646695 -1.0162886 -1.1061819 0.021389354
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1200 0 -2.8688213 -1.0541419 -1.0929891 0.0028248833
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1250 0 -2.8764988 -1.0459176 -1.0959241 0.049805
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1300 0 -2.8776606 -1.0530918 -1.1141788 0.05731449
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1350 0 -2.8789379 -1.0481324 -1.1404108 0.035720707
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1365 0 -2.879076 -1.0493949 -1.1436932 0.037565201
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Loop time of 0.23541 on 4 procs for 365 steps with 800 atoms
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Minimization stats:
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Stopping criterion = energy tolerance
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Energy initial, next-to-last, final =
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-0.744659361981 -2.87907436106 -2.8790759758
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Force two-norm initial, final = 2006.88 0.477401
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Force max component initial, final = 395.193 0.0879763
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Final line search alpha, max atom move = 0.00334856 0.000294593
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Iterations, force evaluations = 365 1437
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Pair time (%) = 0.15347 (65.1926)
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Neigh time (%) = 0.00975943 (4.14572)
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Comm time (%) = 0.0477005 (20.2627)
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Outpt time (%) = 0.000189364 (0.0804402)
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Other time (%) = 0.0242908 (10.3185)
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Nlocal: 200 ave 204 max 194 min
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Histogram: 1 0 0 0 0 1 0 0 0 2
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Nghost: 171.75 ave 173 max 170 min
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Histogram: 1 0 0 1 0 0 0 0 0 2
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Neighs: 1762.75 ave 1797 max 1711 min
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Histogram: 1 0 0 0 0 0 1 1 0 1
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Total # of neighbors = 7051
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Ave neighs/atom = 8.81375
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Neighbor list builds = 78
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Dangerous builds = 0
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fix 3 all box/relax x 1.0 y 2.0 vmax 1.0e-4 nreset 100
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min_modify line quadratic
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minimize 0.0 1.0e-6 10000 100000
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Memory usage per processor = 2.75261 Mbytes
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Step Temp PotEng Pxx Pyy Pxy
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1365 0 -2.879076 -1.0493949 -1.1436932 0.037565201
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1400 0 -2.8859021 -0.86433583 -0.91383427 0.038857701
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1450 0 -2.8929425 -0.58254768 -0.55566103 0.040538566
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1500 0 -2.8966088 -0.28118754 -0.15988163 0.042020855
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1550 0 -2.8967125 0.036820191 0.27480302 0.04324269
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1600 0 -2.8931249 0.36718787 0.74943653 0.044424741
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1650 0 -2.8858731 0.69688815 1.2623711 0.044835267
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1700 0 -2.8755822 0.98073679 1.7977638 0.043907813
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1750 0 -2.8722618 0.99796906 1.9978937 0.040932086
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1800 0 -2.8731203 0.9972851 1.9960832 0.0397236
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1850 0 -2.8733692 1.0063823 2.0084147 0.038402346
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1900 0 -2.8743309 0.99390825 1.9917112 0.036653393
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1950 0 -2.8747275 0.99296382 1.990551 0.03546065
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2000 0 -2.8750021 0.99481655 1.9929497 0.034106229
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2050 0 -2.8753234 0.9952595 1.9937091 0.032945475
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2100 0 -2.8756779 0.99559778 1.9938914 0.031572327
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2150 0 -2.8756378 1.0040013 2.0054123 0.030743908
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2200 0 -2.8762771 0.99204187 1.9892722 0.029598229
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2250 0 -2.8763962 0.99621035 1.9951999 0.028508126
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2300 0 -2.8767096 0.99177935 1.9889303 0.027923296
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2350 0 -2.8769679 0.99269877 1.9902617 0.026808323
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2400 0 -2.8771042 0.99380193 1.9916833 0.025975215
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2450 0 -2.8775424 0.99184579 1.97938 0.025568872
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2500 0 -2.8771356 0.99828478 2.0052062 0.024736775
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2550 0 -2.877267 1.002676 2.0046612 0.024421018
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2600 0 -2.8773832 1.0034348 2.0036706 0.024252349
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2650 0 -2.8774775 1.0022588 2.0041156 0.023860843
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2700 0 -2.8775652 1.0037083 2.0040202 0.023507268
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2750 0 -2.8776593 1.0024326 2.0044148 0.023198797
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2800 0 -2.8777453 1.004064 2.0045537 0.02302249
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2850 0 -2.8778605 1.002326 2.0041875 0.022701703
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2900 0 -2.8779421 1.0039705 2.0044106 0.022501874
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2950 0 -2.8780576 1.002205 2.004013 0.022286397
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3000 0 -2.878144 1.0037936 2.0042112 0.022144639
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3050 0 -2.878249 1.0024755 2.0043935 0.021868589
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3100 0 -2.8783173 1.0046799 2.0055732 0.021796983
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3150 0 -2.8784512 1.0027747 2.004865 0.021615784
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3200 0 -2.878559 1.0041666 2.0046652 0.021479582
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3250 0 -2.8786922 1.0022404 2.0040831 0.021320532
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3300 0 -2.8787858 1.004096 2.004605 0.021189288
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3350 0 -2.8789129 1.0026981 2.0047187 0.021127453
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3400 0 -2.8790212 1.0043735 2.004995 0.021058606
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3450 0 -2.879164 1.0027335 2.0047872 0.020974272
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3500 0 -2.8792771 1.0044701 2.0051521 0.021070297
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3550 0 -2.8794328 1.0028145 2.0049374 0.021192579
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3600 0 -2.8795734 1.0042313 2.0047744 0.021292395
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3650 0 -2.879737 1.0026704 2.0046899 0.02145695
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3700 0 -2.8798799 1.004187 2.0046906 0.021670499
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3750 0 -2.8800527 1.0025941 2.0045865 0.021931753
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3800 0 -2.8801953 1.0043711 2.0050675 0.022267529
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3850 0 -2.8803779 1.0028975 2.0049127 0.022644016
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3900 0 -2.8805489 1.0042463 2.004839 0.02303546
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3950 0 -2.8807459 1.0026018 2.0045822 0.023487163
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4000 0 -2.8809206 1.0043211 2.0049365 0.024057735
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4050 0 -2.8811306 1.0026751 2.0046604 0.024548779
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4100 0 -2.8813175 1.0042501 2.004809 0.025223226
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4150 0 -2.8815321 1.0026815 2.0047067 0.025879137
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4200 0 -2.8817332 1.0041815 2.0047364 0.026433221
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4250 0 -2.8819535 1.0027639 2.0047971 0.027074381
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4300 0 -2.8821659 1.0043035 2.0049339 0.027735264
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4350 0 -2.8824058 1.0026584 2.0046633 0.028227149
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4400 0 -2.8826202 1.0043862 2.0050759 0.028797209
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4450 0 -2.8828729 1.0026433 2.0046321 0.029235838
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4500 0 -2.8830923 1.0043564 2.0050234 0.02975293
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4550 0 -2.8833455 1.0028816 2.0049263 0.030073279
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4600 0 -2.883583 1.0043256 2.0049185 0.030466167
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4650 0 -2.8838564 1.0023697 2.0041961 0.030854459
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4700 0 -2.8840754 1.0044469 2.0051821 0.031197341
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4750 0 -2.8843436 1.002831 2.004918 0.031355133
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4800 0 -2.8845917 1.0043757 2.0050274 0.031541443
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4850 0 -2.8848671 1.0026986 2.0047156 0.031566784
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4900 0 -2.8851161 1.0043141 2.0049762 0.031572733
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4950 0 -2.8853964 1.002652 2.0046411 0.031331471
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5000 0 -2.8856417 1.0044257 2.0051427 0.031202878
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5050 0 -2.8859278 1.0027456 2.0047471 0.030775914
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5100 0 -2.8861877 1.0042977 2.0049634 0.030441144
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5150 0 -2.8864767 1.0027464 2.0047758 0.02978153
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5200 0 -2.8867453 1.0043008 2.0049616 0.029063209
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5250 0 -2.8870354 1.0027935 2.0048062 0.028245435
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5300 0 -2.8873071 1.0043601 2.0050267 0.027521725
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5350 0 -2.8876114 1.0026214 2.0046039 0.026634954
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5400 0 -2.8878769 1.0044164 2.0051328 0.025778952
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5450 0 -2.8881844 1.0027016 2.0046846 0.024723834
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5500 0 -2.8884558 1.0044785 2.0052265 0.023706189
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5550 0 -2.8887683 1.0027546 2.0048109 0.022459744
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5600 0 -2.8890403 1.0045591 2.0053059 0.021203171
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5650 0 -2.8893593 1.0027144 2.0047631 0.01970551
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5700 0 -2.8896364 1.0046104 2.0053635 0.018169806
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5750 0 -2.8899325 1.0032692 2.0055741 0.016385922
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5800 0 -2.890229 1.0045078 2.0052321 0.014521168
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5850 0 -2.8905415 1.0028424 2.0050024 0.012524183
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5900 0 -2.8908238 1.0049628 2.0057692 0.010448481
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5950 0 -2.8911634 1.0028239 2.0050924 0.0079933472
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6000 0 -2.8914615 1.0049197 2.0055042 0.005512578
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6050 0 -2.891809 1.0028681 2.0051886 0.0027066075
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6100 0 -2.8921275 1.0052354 2.0059119 -1.5170443e-05
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6150 0 -2.8925311 1.0024862 2.0049609 -0.002795792
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6200 0 -2.8928601 1.0017098 2.0049899 -0.0052253341
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6250 0 -2.8930615 1.0053803 2.0075809 -0.007194133
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6300 0 -2.8935352 0.99905571 2.0016145 -0.0096001474
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6350 0 -2.8937999 1.0039512 2.0027194 -0.011453741
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6400 0 -2.8941238 1.0043347 2.0074111 -0.014196468
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6450 0 -2.8946531 1.0056365 2.0061099 -0.017009608
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6500 0 -2.8952396 1.0028504 2.005439 -0.019176641
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6550 0 -2.8957887 1.0051549 2.0054964 -0.020783746
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6600 0 -2.8963492 1.0033409 2.0059471 -0.021761418
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6650 0 -2.8969158 1.0053128 2.0057702 -0.021968895
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6700 0 -2.8976272 1.0027282 2.0057251 -0.022086108
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6750 0 -2.8982968 1.0065938 2.0050641 -0.022568539
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6800 0 -2.8989096 0.99666307 1.9917715 -0.023001041
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6850 0 -2.8988567 1.0016996 2.00386 -0.023549106
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6900 0 -2.899188 1.0018864 1.9973057 -0.023696051
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6950 0 -2.8992845 1.0019601 2.0057552 -0.024164521
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7000 0 -2.8996208 1.0047972 2.0009263 -0.024097154
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7050 0 -2.9002588 0.99084281 1.9901195 -0.024350033
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7100 0 -2.9004617 0.99703388 1.994421 -0.024490655
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7150 0 -2.9011318 0.99392438 1.9936356 -0.024358695
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7200 0 -2.9017299 0.99584554 1.9930404 -0.024166501
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7250 0 -2.9022782 0.99338994 1.9925907 -0.023714272
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7300 0 -2.9027424 0.99574804 1.992852 -0.023226666
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7350 0 -2.9032209 0.99325942 1.9924179 -0.022676492
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7400 0 -2.9036195 0.99587935 1.9930234 -0.022050714
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7450 0 -2.9040602 0.99304372 1.9924225 -0.021334064
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7500 0 -2.9044456 0.99574399 1.9929621 -0.020468113
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7550 0 -2.9048928 0.99283125 1.9916196 -0.019745152
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7600 0 -2.9052487 0.99613353 1.9929757 -0.01878099
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7650 0 -2.9056838 0.9930926 1.9921128 -0.018076523
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7700 0 -2.9060803 0.99531672 1.9923106 -0.017274375
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7750 0 -2.9065194 0.99295164 1.9918983 -0.016776812
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7800 0 -2.9069076 0.99581999 1.9928558 -0.016414512
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7850 0 -2.9073591 0.9931813 1.9923196 -0.016151505
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7900 0 -2.9077762 0.9952822 1.9923704 -0.015884543
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7950 0 -2.9082184 0.99303267 1.9919 -0.015770026
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8000 0 -2.9086243 0.99571188 1.9925882 -0.015502696
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8050 0 -2.9090693 0.99302809 1.9920738 -0.015387613
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8100 0 -2.909466 0.99566468 1.9926533 -0.015174688
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8150 0 -2.9099165 0.9930803 1.9918066 -0.01527935
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8200 0 -2.910309 0.99578925 1.9926599 -0.015137929
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8250 0 -2.9107625 0.99296173 1.9917783 -0.01501993
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8300 0 -2.9111717 0.99561737 1.9925441 -0.014840463
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8350 0 -2.9116459 0.9930842 1.9920006 -0.014651227
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8400 0 -2.9120664 0.99589068 1.9929837 -0.014404733
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8450 0 -2.9125817 0.99327737 1.9923055 -0.014166223
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8500 0 -2.9130964 0.995764 1.9929219 -0.013745204
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8550 0 -2.913721 0.99359811 1.9926788 -0.013240653
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8600 0 -2.9139305 1.0052621 2.0063975 -0.012763335
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8650 0 -2.9144207 1.000171 2.0022216 -0.012252306
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8700 0 -2.9149447 0.99704589 1.9923337 -0.011530912
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8750 0 -2.9152104 0.99413522 1.9954113 -0.011224718
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8800 0 -2.9154304 1.0041572 1.996481 -0.010486614
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8850 0 -2.9159535 0.99229149 1.9896902 -0.010138691
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8900 0 -2.9161096 0.99893906 1.9947765 -0.0098973816
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8950 0 -2.9163734 0.99613603 1.9962343 -0.0097646929
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9000 0 -2.916772 0.99746648 1.9948787 -0.009559373
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9050 0 -2.9169999 1.0038678 2.0028722 -0.0099005156
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9100 0 -2.9171948 1.0055979 2.005962 -0.010168465
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9150 0 -2.9175792 1.0056384 2.0055831 -0.010545324
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9200 0 -2.918316 1.003467 2.0019992 -0.011894619
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9250 0 -2.918905 0.99416126 1.9897547 -0.012414724
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9300 0 -2.9190059 1.0045845 2.0050386 -0.013476648
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9350 0 -2.9193084 1.0043075 2.0035131 -0.014061442
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9400 0 -2.9195274 1.0004097 2.0075884 -0.014669943
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9450 0 -2.9196647 1.0078585 2.0083355 -0.014773122
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9500 0 -2.920045 0.99720708 2.002851 -0.015372661
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9550 0 -2.9201962 1.0038389 2.0030346 -0.015506301
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9600 0 -2.9204398 1.0069753 2.0114581 -0.016339104
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9650 0 -2.9208212 0.99631341 2.0030231 -0.016614789
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9700 0 -2.9208843 1.0037705 2.0128886 -0.016882954
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9750 0 -2.9214802 0.99373337 1.9924584 -0.016401176
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9800 0 -2.9215167 1.0068503 1.9964267 -0.015715783
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9850 0 -2.9215046 1.0005924 2.0050594 -0.015810235
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9900 0 -2.921582 1.0110556 2.0046653 -0.015197287
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9950 0 -2.9217936 1.0035561 2.0016688 -0.014919912
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10000 0 -2.9218919 0.9986774 2.0059801 -0.014402484
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10050 0 -2.922287 1.002836 1.9905929 -0.013111459
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10100 0 -2.9222158 1.0001746 2.0012151 -0.012635659
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10150 0 -2.9224668 0.9944203 1.9962869 -0.011523541
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10200 0 -2.9226837 0.99831 1.9897002 -0.010231598
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10250 0 -2.9226653 1.0031001 1.9970323 -0.0088422762
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10300 0 -2.922597 1.0065743 2.0060393 -0.0074980789
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10350 0 -2.9228195 0.99433146 2.0023639 -0.0066673288
|
|
10400 0 -2.9230978 0.99750867 1.9948447 -0.0043504002
|
|
10450 0 -2.9229895 0.99535681 2.0074668 -0.0028798679
|
|
10500 0 -2.9234529 0.99110704 1.9917133 -0.00045327289
|
|
10550 0 -2.9234805 0.99545445 1.9961 0.001710051
|
|
10600 0 -2.9235882 1.0054527 1.9957363 0.0046088264
|
|
10650 0 -2.9237144 0.99812094 1.9964942 0.0062983191
|
|
10700 0 -2.9240099 0.99145722 1.9888812 0.0082937382
|
|
10750 0 -2.923998 0.99396244 1.9992545 0.011675442
|
|
10800 0 -2.9241729 0.99706722 1.9980958 0.014976508
|
|
10850 0 -2.924221 1.0070608 2.0010354 0.018179217
|
|
10900 0 -2.9243888 0.99682932 2.0049201 0.021300775
|
|
10950 0 -2.9245898 0.9991085 2.0008019 0.02383127
|
|
11000 0 -2.9248079 0.99500439 1.9968747 0.02593884
|
|
11050 0 -2.9250582 1.0036919 1.9932297 0.029871699
|
|
11100 0 -2.9251939 0.99338379 1.9994486 0.032537644
|
|
11150 0 -2.9253686 1.0026492 1.9988011 0.035919671
|
|
11200 0 -2.9256832 0.99646255 1.9962014 0.038918266
|
|
11250 0 -2.9260443 0.99519652 1.9899849 0.042046322
|
|
11300 0 -2.9259773 1.0004947 2.0049386 0.044777218
|
|
11350 0 -2.9265098 0.99691435 1.9979313 0.049237927
|
|
11365 0 -2.9267488 0.99392914 1.9893654 0.049993204
|
|
Loop time of 2.07865 on 4 procs for 10000 steps with 800 atoms
|
|
|
|
Minimization stats:
|
|
Stopping criterion = max iterations
|
|
Energy initial, next-to-last, final =
|
|
-2.8790759758 -2.92679351312 -2.92674880547
|
|
Force two-norm initial, final = 3556.23 12.3258
|
|
Force max component initial, final = 2979.1 9.29982
|
|
Final line search alpha, max atom move = 3.45647e-05 0.000321445
|
|
Iterations, force evaluations = 10000 10065
|
|
|
|
Pair time (%) = 1.14782 (55.2193)
|
|
Neigh time (%) = 0.00358385 (0.172412)
|
|
Comm time (%) = 0.327161 (15.7391)
|
|
Outpt time (%) = 0.00532395 (0.256125)
|
|
Other time (%) = 0.594766 (28.613)
|
|
|
|
Nlocal: 200 ave 205 max 193 min
|
|
Histogram: 1 0 0 0 0 1 0 1 0 1
|
|
Nghost: 178.25 ave 182 max 174 min
|
|
Histogram: 1 0 1 0 0 0 0 0 1 1
|
|
Neighs: 1855.25 ave 1881 max 1810 min
|
|
Histogram: 1 0 0 0 0 1 0 0 0 2
|
|
|
|
Total # of neighbors = 7421
|
|
Ave neighs/atom = 9.27625
|
|
Neighbor list builds = 28
|
|
Dangerous builds = 0
|