forked from lijiext/lammps
121 lines
4.3 KiB
C++
121 lines
4.3 KiB
C++
/***************************************************************************
|
|
yukawa_ext.cpp
|
|
-------------------
|
|
Trung Dac Nguyen (ORNL)
|
|
|
|
Functions for LAMMPS access to yukawa acceleration routines.
|
|
|
|
__________________________________________________________________________
|
|
This file is part of the LAMMPS Accelerator Library (LAMMPS_AL)
|
|
__________________________________________________________________________
|
|
|
|
begin :
|
|
email : nguyentd@ornl.gov
|
|
***************************************************************************/
|
|
|
|
#include <iostream>
|
|
#include <cassert>
|
|
#include <cmath>
|
|
|
|
#include "lal_yukawa.h"
|
|
|
|
using namespace std;
|
|
using namespace LAMMPS_AL;
|
|
|
|
static Yukawa<PRECISION,ACC_PRECISION> YKMF;
|
|
|
|
// ---------------------------------------------------------------------------
|
|
// Allocate memory on host and device and copy constants to device
|
|
// ---------------------------------------------------------------------------
|
|
int yukawa_gpu_init(const int ntypes, double **cutsq, double kappa,
|
|
double **host_a, double **offset, double *special_lj,
|
|
const int inum, const int nall, const int max_nbors,
|
|
const int maxspecial, const double cell_size,
|
|
int &gpu_mode, FILE *screen) {
|
|
YKMF.clear();
|
|
gpu_mode=YKMF.device->gpu_mode();
|
|
double gpu_split=YKMF.device->particle_split();
|
|
int first_gpu=YKMF.device->first_device();
|
|
int last_gpu=YKMF.device->last_device();
|
|
int world_me=YKMF.device->world_me();
|
|
int gpu_rank=YKMF.device->gpu_rank();
|
|
int procs_per_gpu=YKMF.device->procs_per_gpu();
|
|
|
|
YKMF.device->init_message(screen,"yukawa",first_gpu,last_gpu);
|
|
|
|
bool message=false;
|
|
if (YKMF.device->replica_me()==0 && screen)
|
|
message=true;
|
|
|
|
if (message) {
|
|
fprintf(screen,"Initializing Device and compiling on process 0...");
|
|
fflush(screen);
|
|
}
|
|
|
|
int init_ok=0;
|
|
if (world_me==0)
|
|
init_ok=YKMF.init(ntypes, cutsq, kappa, host_a, offset, special_lj,
|
|
inum, nall, 300, maxspecial, cell_size,
|
|
gpu_split, screen);
|
|
|
|
YKMF.device->world_barrier();
|
|
if (message)
|
|
fprintf(screen,"Done.\n");
|
|
|
|
for (int i=0; i<procs_per_gpu; i++) {
|
|
if (message) {
|
|
if (last_gpu-first_gpu==0)
|
|
fprintf(screen,"Initializing Device %d on core %d...",first_gpu,i);
|
|
else
|
|
fprintf(screen,"Initializing Devices %d-%d on core %d...",first_gpu,
|
|
last_gpu,i);
|
|
fflush(screen);
|
|
}
|
|
if (gpu_rank==i && world_me!=0)
|
|
init_ok=YKMF.init(ntypes, cutsq, kappa, host_a, offset, special_lj,
|
|
inum, nall, 300, maxspecial, cell_size,
|
|
gpu_split, screen);
|
|
|
|
YKMF.device->gpu_barrier();
|
|
if (message)
|
|
fprintf(screen,"Done.\n");
|
|
}
|
|
if (message)
|
|
fprintf(screen,"\n");
|
|
|
|
if (init_ok==0)
|
|
YKMF.estimate_gpu_overhead();
|
|
return init_ok;
|
|
}
|
|
|
|
void yukawa_gpu_clear() {
|
|
YKMF.clear();
|
|
}
|
|
|
|
int ** yukawa_gpu_compute_n(const int ago, const int inum_full,
|
|
const int nall, double **host_x, int *host_type,
|
|
double *sublo, double *subhi, tagint *tag, int **nspecial,
|
|
tagint **special, const bool eflag, const bool vflag,
|
|
const bool eatom, const bool vatom, int &host_start,
|
|
int **ilist, int **jnum, const double cpu_time,
|
|
bool &success) {
|
|
return YKMF.compute(ago, inum_full, nall, host_x, host_type, sublo,
|
|
subhi, tag, nspecial, special, eflag, vflag, eatom,
|
|
vatom, host_start, ilist, jnum, cpu_time, success);
|
|
}
|
|
|
|
void yukawa_gpu_compute(const int ago, const int inum_full, const int nall,
|
|
double **host_x, int *host_type, int *ilist, int *numj,
|
|
int **firstneigh, const bool eflag, const bool vflag,
|
|
const bool eatom, const bool vatom, int &host_start,
|
|
const double cpu_time, bool &success) {
|
|
YKMF.compute(ago,inum_full,nall,host_x,host_type,ilist,numj,
|
|
firstneigh,eflag,vflag,eatom,vatom,host_start,cpu_time,success);
|
|
}
|
|
|
|
double yukawa_gpu_bytes() {
|
|
return YKMF.host_memory_usage();
|
|
}
|
|
|
|
|