forked from lijiext/lammps
414 lines
12 KiB
Plaintext
414 lines
12 KiB
Plaintext
LAMMPS data file. CGCMM style. atom_style full generated by VMD/TopoTools v1.4 on Tue Aug 05 00:34:49 EDT 2014
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192 atoms
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128 bonds
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64 angles
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0 dihedrals
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0 impropers
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2 atom types
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1 bond types
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1 angle types
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0 dihedral types
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0 improper types
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-0.025952 12.398448 xlo xhi
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-0.072222 12.352178 ylo yhi
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0.103767 12.528167 zlo zhi
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Masses
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1 15.999400 # O
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2 1.008000 # H
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Atoms # full
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1 1 1 -1.112800 11.904200 11.004000 2.647150 # O
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2 1 2 0.556400 11.274600 10.441300 3.165040 # H
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3 1 2 0.556400 12.657229 10.697500 2.992120 # H
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4 2 1 -1.112800 11.419600 1.182280 9.137010 # O
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5 2 2 0.556400 11.398800 1.594150 8.310830 # H
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6 2 2 0.556400 10.506300 0.898235 9.233160 # H
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7 3 1 -1.112800 4.826680 1.783510 11.516400 # O
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8 3 2 0.556400 4.546870 1.811150 10.564300 # H
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9 3 2 0.556400 4.055660 1.238270 11.973500 # H
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10 4 1 -1.112800 12.288000 1.904120 1.044200 # O
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11 4 2 0.556400 11.828600 1.153600 0.839629 # H
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12 4 2 0.556400 12.277700 2.333890 0.302505 # H
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13 5 1 -1.112800 11.857500 1.676770 6.187920 # O
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14 5 2 0.556400 11.648400 2.074730 5.284650 # H
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15 5 2 0.556400 11.876700 0.812108 5.948150 # H
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16 6 1 -1.112800 2.097890 5.057070 3.011100 # O
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17 6 2 0.556400 2.136570 4.204340 2.822200 # H
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18 6 2 0.556400 1.248920 5.503130 3.095170 # H
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19 7 1 -1.112800 8.969570 9.662130 12.397100 # O
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20 7 2 0.556400 9.686170 10.151600 12.437590 # H
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21 7 2 0.556400 9.532380 8.853020 12.470100 # H
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22 8 1 -1.112800 7.003800 0.166948 11.866400 # O
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23 8 2 0.556400 7.602080 -0.008490 11.078100 # H
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24 8 2 0.556400 6.314920 0.854812 11.845400 # H
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25 9 1 -1.112800 7.279490 7.009030 4.039650 # O
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26 9 2 0.556400 6.480970 6.584280 4.507850 # H
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27 9 2 0.556400 7.966830 6.725300 4.670490 # H
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28 10 1 -1.112800 4.968300 6.252330 2.294100 # O
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29 10 2 0.556400 4.323490 6.517690 2.931870 # H
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30 10 2 0.556400 5.091090 6.970190 1.641050 # H
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31 11 1 -1.112800 9.233370 1.170670 1.198800 # O
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32 11 2 0.556400 8.772080 2.002300 1.423460 # H
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33 11 2 0.556400 8.648900 0.665205 0.687128 # H
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34 12 1 -1.112800 10.128900 4.638490 3.506180 # O
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35 12 2 0.556400 9.350580 4.298580 3.037750 # H
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36 12 2 0.556400 9.946100 4.618830 4.531850 # H
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37 13 1 -1.112800 2.868470 0.334175 0.677477 # O
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38 13 2 0.556400 2.403840 0.200999 -0.138964 # H
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39 13 2 0.556400 2.069790 0.770509 1.118620 # H
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40 14 1 -1.112800 0.990607 8.880780 7.919540 # O
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41 14 2 0.556400 1.468800 8.257450 8.474370 # H
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42 14 2 0.556400 1.548730 9.628320 7.837180 # H
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43 15 1 -1.112800 6.037680 11.965300 1.967580 # O
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44 15 2 0.556400 6.711200 11.358900 2.192700 # H
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45 15 2 0.556400 6.440020 12.350600 1.125540 # H
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46 16 1 -1.112800 10.081700 7.285330 11.995600 # O
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47 16 2 0.556400 9.502260 6.951850 12.805980 # H
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48 16 2 0.556400 9.656250 6.986780 11.119000 # H
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49 17 1 -1.112800 8.035030 3.368010 1.956490 # O
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50 17 2 0.556400 7.178750 3.084810 2.288990 # H
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51 17 2 0.556400 7.710830 4.079910 1.281810 # H
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52 18 1 -1.112800 6.425050 9.669080 5.164110 # O
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53 18 2 0.556400 5.437580 9.502120 5.160280 # H
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54 18 2 0.556400 6.816230 9.186900 4.533480 # H
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55 19 1 -1.112800 5.379420 6.514400 8.405390 # O
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56 19 2 0.556400 5.755950 6.334530 9.297210 # H
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57 19 2 0.556400 5.440740 7.514240 8.532830 # H
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58 20 1 -1.112800 2.046140 1.943010 5.846200 # O
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59 20 2 0.556400 1.143970 1.913690 6.058140 # H
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60 20 2 0.556400 2.248230 1.154690 5.418870 # H
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61 21 1 -1.112800 5.107140 1.201150 4.136430 # O
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62 21 2 0.556400 5.044840 2.013910 3.551730 # H
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63 21 2 0.556400 5.377520 0.578867 3.455080 # H
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64 22 1 -1.112800 4.596620 8.523380 10.800400 # O
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65 22 2 0.556400 5.239180 8.321920 11.448900 # H
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66 22 2 0.556400 3.811110 8.904250 11.215900 # H
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67 23 1 -1.112800 11.753800 2.360940 3.561900 # O
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68 23 2 0.556400 11.219800 3.198640 3.682850 # H
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69 23 2 0.556400 11.740900 2.309440 2.589890 # H
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70 24 1 -1.112800 10.148400 9.230600 4.794850 # O
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71 24 2 0.556400 10.724900 8.587640 4.193460 # H
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72 24 2 0.556400 9.774880 8.755770 5.473800 # H
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73 25 1 -1.112800 3.678800 8.862530 5.475880 # O
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74 25 2 0.556400 3.654050 7.908400 5.269890 # H
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75 25 2 0.556400 3.784180 9.231390 6.370230 # H
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76 26 1 -1.112800 2.424500 5.061670 0.010513 # O
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77 26 2 0.556400 2.259390 5.063060 1.073770 # H
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78 26 2 0.556400 1.699730 5.358760 -0.532400 # H
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79 27 1 -1.112800 2.031790 9.273860 3.335100 # O
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80 27 2 0.556400 2.576050 9.625000 2.421210 # H
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81 27 2 0.556400 2.552020 9.204230 4.251920 # H
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82 28 1 -1.112800 0.671121 5.562010 10.459300 # O
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83 28 2 0.556400 0.240613 4.699610 10.429400 # H
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84 28 2 0.556400 1.201350 5.761520 9.675160 # H
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85 29 1 -1.112800 2.186950 2.475840 2.653370 # O
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86 29 2 0.556400 2.318520 2.024870 3.544650 # H
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87 29 2 0.556400 1.317700 2.072840 2.368920 # H
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88 30 1 -1.112800 2.189580 6.283080 8.069060 # O
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89 30 2 0.556400 1.900250 6.315140 7.216860 # H
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90 30 2 0.556400 3.129850 6.506460 8.013540 # H
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91 31 1 -1.112800 8.673330 10.156400 9.670670 # O
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92 31 2 0.556400 8.580570 10.190500 10.546700 # H
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93 31 2 0.556400 9.689670 10.206300 9.469020 # H
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94 32 1 -1.112800 3.925400 3.636840 7.691570 # O
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95 32 2 0.556400 4.254210 4.458460 7.545880 # H
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96 32 2 0.556400 2.917900 3.558790 7.218470 # H
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97 33 1 -1.112800 2.091950 11.573700 5.309100 # O
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98 33 2 0.556400 2.360650 10.852800 4.677420 # H
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99 33 2 0.556400 1.246180 11.339800 5.622280 # H
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100 34 1 -1.112800 9.475430 0.348874 4.098120 # O
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101 34 2 0.556400 8.884690 -0.244864 3.347450 # H
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102 34 2 0.556400 10.054100 0.774503 3.600670 # H
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103 35 1 -1.112800 0.010520 6.679330 6.084480 # O
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104 35 2 0.556400 0.046652 7.214860 6.876490 # H
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105 35 2 0.556400 0.310100 7.241510 5.330880 # H
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106 36 1 -1.112800 6.153230 4.948680 5.715680 # O
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107 36 2 0.556400 6.347170 5.425750 6.507980 # H
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108 36 2 0.556400 6.681400 4.134080 5.619610 # H
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109 37 1 -1.112800 3.898970 10.122100 1.533400 # O
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110 37 2 0.556400 4.479990 10.910500 1.499800 # H
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111 37 2 0.556400 3.858400 10.101700 0.579605 # H
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112 38 1 -1.112800 11.506200 3.204840 10.861000 # O
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113 38 2 0.556400 10.597600 3.222960 11.028100 # H
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114 38 2 0.556400 11.546500 2.434670 10.319100 # H
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115 39 1 -1.112800 10.677900 4.338840 6.172880 # O
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116 39 2 0.556400 11.342100 4.987790 6.277110 # H
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117 39 2 0.556400 11.105000 3.454520 6.329560 # H
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118 40 1 -1.112800 11.269000 10.402200 8.967430 # O
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119 40 2 0.556400 11.945700 9.669490 8.817430 # H
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120 40 2 0.556400 11.392200 10.972400 9.673550 # H
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121 41 1 -1.112800 9.015520 6.819390 9.590060 # O
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122 41 2 0.556400 8.480310 7.447960 9.075890 # H
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123 41 2 0.556400 8.772660 5.864390 9.537090 # H
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124 42 1 -1.112800 9.156080 7.043630 6.079910 # O
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125 42 2 0.556400 9.786990 6.368220 6.462160 # H
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126 42 2 0.556400 8.637950 7.287850 6.807400 # H
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127 43 1 -1.112800 8.023320 10.118300 2.593470 # O
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128 43 2 0.556400 8.835280 9.772450 3.075270 # H
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129 43 2 0.556400 8.319480 10.174900 1.654080 # H
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130 44 1 -1.112800 11.458700 11.363500 6.215150 # O
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131 44 2 0.556400 10.817600 10.742100 5.830830 # H
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132 44 2 0.556400 11.362800 11.032500 7.071230 # H
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133 45 1 -1.112800 7.501170 8.687200 7.619310 # O
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134 45 2 0.556400 6.987900 9.210670 6.875940 # H
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135 45 2 0.556400 7.775980 9.294880 8.278630 # H
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136 46 1 -1.112800 12.163200 7.636940 3.306910 # O
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137 46 2 0.556400 11.905500 7.001590 2.634400 # H
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138 46 2 0.556400 13.143695 7.878660 3.172600 # H
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139 47 1 -1.112800 3.855820 9.856260 8.038060 # O
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140 47 2 0.556400 4.106300 10.648500 7.785770 # H
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141 47 2 0.556400 4.004960 10.015200 9.060490 # H
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142 48 1 -1.112800 11.959100 11.106700 12.207400 # O
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143 48 2 0.556400 11.627900 11.064000 13.164333 # H
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144 48 2 0.556400 12.908351 10.710100 12.287100 # H
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145 49 1 -1.112800 5.215880 4.825910 11.379400 # O
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146 49 2 0.556400 5.091530 3.935540 11.648000 # H
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147 49 2 0.556400 4.395040 5.172330 11.674300 # H
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148 50 1 -1.112800 3.447470 6.263900 5.322950 # O
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149 50 2 0.556400 2.953140 6.002480 4.629230 # H
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150 50 2 0.556400 4.256030 5.710520 5.184060 # H
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151 51 1 -1.112800 9.252860 6.955710 2.103340 # O
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152 51 2 0.556400 9.635100 6.201610 2.627900 # H
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153 51 2 0.556400 8.511360 7.033430 2.773840 # H
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154 52 1 -1.112800 7.010900 2.690190 8.051850 # O
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155 52 2 0.556400 7.205340 2.906420 7.186290 # H
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156 52 2 0.556400 5.978790 2.609760 8.151220 # H
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157 53 1 -1.112800 7.593650 5.241530 12.303700 # O
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158 53 2 0.556400 7.778320 6.013730 11.866800 # H
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159 53 2 0.556400 6.619420 5.032550 12.146000 # H
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160 54 1 -1.112800 8.311930 4.384830 9.775160 # O
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161 54 2 0.556400 8.029970 3.742280 9.209050 # H
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162 54 2 0.556400 7.710280 4.412850 10.689200 # H
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163 55 1 -1.112800 0.216025 8.259980 11.000200 # O
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164 55 2 0.556400 -0.771200 8.207870 11.179900 # H
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165 55 2 0.556400 0.405663 7.364710 10.808500 # H
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166 56 1 -1.112800 5.092650 3.345230 2.380140 # O
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167 56 2 0.556400 4.289880 3.402320 2.037290 # H
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168 56 2 0.556400 5.195870 4.270950 2.448160 # H
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169 57 1 -1.112800 8.415280 0.433228 9.468590 # O
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170 57 2 0.556400 8.232370 -0.590000 9.181410 # H
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171 57 2 0.556400 7.890330 0.865852 8.788890 # H
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172 58 1 -1.112800 1.521980 12.261800 10.252200 # O
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173 58 2 0.556400 2.313870 12.717497 9.819640 # H
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174 58 2 0.556400 0.740191 12.869956 10.193400 # H
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175 59 1 -1.112800 5.046090 0.042758 7.210720 # O
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176 59 2 0.556400 4.465450 0.143690 6.438300 # H
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177 59 2 0.556400 6.007220 0.148100 6.995730 # H
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178 60 1 -1.112800 8.116110 11.951600 6.522740 # O
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179 60 2 0.556400 8.877920 11.978800 5.875040 # H
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180 60 2 0.556400 7.461260 11.374300 6.175280 # H
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181 61 1 -1.112800 7.559250 2.393910 5.322680 # O
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182 61 2 0.556400 8.225370 1.772280 4.928820 # H
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183 61 2 0.556400 6.701890 2.109310 4.957270 # H
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184 62 1 -1.112800 2.306480 9.941070 11.436600 # O
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185 62 2 0.556400 1.774970 9.157100 11.271100 # H
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186 62 2 0.556400 1.870360 10.613100 10.942200 # H
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187 63 1 -1.112800 3.674940 1.236140 9.165420 # O
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188 63 2 0.556400 4.256920 0.800629 8.426150 # H
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189 63 2 0.556400 3.551770 2.121820 8.663390 # H
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190 64 1 -1.112800 6.313260 8.030800 0.560737 # O
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191 64 2 0.556400 7.065380 7.786980 0.801491 # H
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192 64 2 0.556400 6.039630 8.846740 1.106740 # H
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Bonds
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1 1 1 2
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2 1 1 3
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3 1 4 5
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4 1 4 6
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5 1 7 8
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6 1 7 9
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7 1 10 11
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8 1 10 12
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9 1 13 14
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10 1 13 15
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11 1 16 17
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12 1 16 18
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13 1 19 20
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14 1 19 21
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15 1 22 23
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16 1 22 24
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17 1 25 26
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18 1 25 27
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19 1 28 29
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20 1 28 30
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21 1 31 32
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22 1 31 33
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23 1 34 35
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24 1 34 36
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25 1 37 38
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26 1 37 39
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27 1 40 41
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28 1 40 42
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29 1 43 44
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30 1 43 45
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31 1 46 47
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32 1 46 48
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33 1 49 50
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34 1 49 51
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35 1 52 53
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36 1 52 54
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37 1 55 56
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38 1 55 57
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39 1 58 59
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40 1 58 60
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41 1 61 62
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42 1 61 63
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43 1 64 65
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44 1 64 66
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45 1 67 68
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46 1 67 69
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47 1 70 71
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48 1 70 72
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49 1 73 74
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50 1 73 75
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51 1 76 77
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52 1 76 78
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53 1 79 80
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54 1 79 81
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55 1 82 83
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56 1 82 84
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57 1 85 86
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58 1 85 87
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59 1 88 89
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60 1 88 90
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61 1 91 92
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62 1 91 93
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63 1 94 95
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64 1 94 96
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65 1 97 98
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66 1 97 99
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67 1 100 101
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68 1 100 102
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69 1 103 104
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70 1 103 105
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71 1 106 107
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72 1 106 108
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73 1 109 110
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74 1 109 111
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75 1 112 113
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76 1 112 114
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77 1 115 116
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78 1 115 117
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79 1 118 119
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80 1 118 120
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81 1 121 122
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82 1 121 123
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83 1 124 125
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84 1 124 126
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85 1 127 128
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86 1 127 129
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87 1 130 131
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88 1 130 132
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89 1 133 134
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90 1 133 135
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91 1 136 137
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92 1 136 138
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93 1 139 140
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94 1 139 141
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95 1 142 143
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96 1 142 144
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97 1 145 146
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98 1 145 147
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99 1 148 149
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100 1 148 150
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101 1 151 152
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102 1 151 153
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103 1 154 155
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104 1 154 156
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105 1 157 158
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106 1 157 159
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107 1 160 161
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108 1 160 162
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109 1 163 164
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110 1 163 165
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111 1 166 167
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112 1 166 168
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113 1 169 170
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114 1 169 171
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115 1 172 173
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116 1 172 174
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117 1 175 176
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118 1 175 177
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119 1 178 179
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120 1 178 180
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121 1 181 182
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122 1 181 183
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123 1 184 185
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124 1 184 186
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125 1 187 188
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126 1 187 189
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127 1 190 191
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128 1 190 192
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Angles
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1 1 2 1 3
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2 1 5 4 6
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3 1 8 7 9
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4 1 11 10 12
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|
5 1 14 13 15
|
|
6 1 17 16 18
|
|
7 1 20 19 21
|
|
8 1 23 22 24
|
|
9 1 26 25 27
|
|
10 1 29 28 30
|
|
11 1 32 31 33
|
|
12 1 35 34 36
|
|
13 1 38 37 39
|
|
14 1 41 40 42
|
|
15 1 44 43 45
|
|
16 1 47 46 48
|
|
17 1 50 49 51
|
|
18 1 53 52 54
|
|
19 1 56 55 57
|
|
20 1 59 58 60
|
|
21 1 62 61 63
|
|
22 1 65 64 66
|
|
23 1 68 67 69
|
|
24 1 71 70 72
|
|
25 1 74 73 75
|
|
26 1 77 76 78
|
|
27 1 80 79 81
|
|
28 1 83 82 84
|
|
29 1 86 85 87
|
|
30 1 89 88 90
|
|
31 1 92 91 93
|
|
32 1 95 94 96
|
|
33 1 98 97 99
|
|
34 1 101 100 102
|
|
35 1 104 103 105
|
|
36 1 107 106 108
|
|
37 1 110 109 111
|
|
38 1 113 112 114
|
|
39 1 116 115 117
|
|
40 1 119 118 120
|
|
41 1 122 121 123
|
|
42 1 125 124 126
|
|
43 1 128 127 129
|
|
44 1 131 130 132
|
|
45 1 134 133 135
|
|
46 1 137 136 138
|
|
47 1 140 139 141
|
|
48 1 143 142 144
|
|
49 1 146 145 147
|
|
50 1 149 148 150
|
|
51 1 152 151 153
|
|
52 1 155 154 156
|
|
53 1 158 157 159
|
|
54 1 161 160 162
|
|
55 1 164 163 165
|
|
56 1 167 166 168
|
|
57 1 170 169 171
|
|
58 1 173 172 174
|
|
59 1 176 175 177
|
|
60 1 179 178 180
|
|
61 1 182 181 183
|
|
62 1 185 184 186
|
|
63 1 188 187 189
|
|
64 1 191 190 192
|
|
|