forked from lijiext/lammps
89 lines
3.2 KiB
Plaintext
Executable File
89 lines
3.2 KiB
Plaintext
Executable File
"LAMMPS WWW Site"_lws - "LAMMPS Documentation"_ld - "LAMMPS Commands"_lc :c
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:link(lws,http://lammps.sandia.gov)
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:link(ld,Manual.html)
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:link(lc,Section_commands.html#comm)
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:line
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compute temp/asphere command :h3
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[Syntax:]
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compute ID group-ID temp/asphere :pre
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ID, group-ID are documented in "compute"_compute.html command
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temp/asphere = style name of this compute command :ul
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[Examples:]
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compute 1 all temp/asphere
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compute myTemp mobile temp/asphere :pre
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[Description:]
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Define a computation that calculates the temperature of a group of
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aspherical particles, including a contribution from both their
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translational and rotational kinetic energy. This differs from the
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usual "compute temp" command which assumes point particles with only
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translational kinetic energy.
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For 3d aspherical particles, each has 3, 5, or 6 degrees of freedom (3
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translational, remainder rotational), depending on whether the
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particle is spherical, uniaxial, or biaxial. This is determined by
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the "shape"_shape.html command. Uniaxial means two of its three shape
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parameters are equal. Biaxial means they all 3 are different.
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For 2d aspherical particles ...
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The rotational kinetic energy is computed as 1/2 I w^2, where I is the
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inertia tensor for the aspherical particle and w is its angular
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velocity, which is computed from its angular momentum.
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IMPORTANT NOTE: These degrees of freedom assume that the interaction
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potential between degenerate aspherical particles does not impart
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rotational motion to the extra degrees of freedom. E.g. the "GayBerne
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pair potential"_pair_gayberne.html does not impart torque to spherical
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particles, so they do not rotate.
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IMPORTANT NOTE: For a "2-dimensional system"_dimension.html, particles
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are treated as ellipsoids, not ellipses.
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A 6-component kinetic energy tensor is also calculated by this
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compute. The formula for the components of the tensor is the same as
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the above formula, except that v^2 and w^2 are replaced by vx*vy and
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wx*wy for the xy component, and the appropriate elements of the
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inertia tensor are used.
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The number of atoms contributing to the temperature is assumed to be
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constant for the duration of the run; use the {dynamic} option of the
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"compute_modify"_compute_modify.html command if this is not the case.
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This compute subtracts out translational degrees-of-freedom due to
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fixes that constrain molecular motion, such as "fix
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shake"_fix_shake.html and "fix rigid"_fix_rigid.html. This means the
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temperature of groups of atoms that include these constraints will be
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computed correctly. If needed, the subtracted degrees-of-freedom can
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be altered using the {extra} option of the
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"compute_modify"_compute_modify.html command.
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[Output info:]
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The scalar value calculated by this compute is "intensive", meaning it
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is independent of the number of atoms in the simulation. The vector
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values are "extensive", meaning they scale with the number of atoms in
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the simulation.
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[Restrictions:]
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This compute requires that particles be represented as extended
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ellipsoids and not point particles. This means they will have an
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angular momentum and a shape which is determined by the
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"shape"_shape.html command.
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[Related commands:]
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"compute temp"_compute_temp.html
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[Default:] none
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