forked from lijiext/lammps
29 lines
721 B
Plaintext
29 lines
721 B
Plaintext
#!/usr/local/bin/vmd
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# Display settings
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display projection Orthographic
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mol new deca-ala-solv.psf type psf first 0 last -1 step 1 filebonds 1 autobonds 1 waitfor all
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mol delrep 0 top
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mol representation Licorice
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mol color Name
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mol selection {protein}
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mol material Glossy
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mol addrep top
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mol selupdate 0 top 1
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mol representation HBonds 4.000000 30.000000 3.000000
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mol color ColorID 4
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mol selection {same residue as within 3.1 of protein}
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mol material Opaque
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mol addrep top
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mol selupdate 1 top 1
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mol representation Lines 2.000000
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mol color Name
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mol selection {(same residue as within 3.1 of protein) and water}
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mol addrep top
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mol selupdate 2 top 1
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imd connect localhost 5678
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sleep 1
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display resetview
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mouse mode forceres
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