forked from lijiext/lammps
2668 lines
20 KiB
Plaintext
2668 lines
20 KiB
Plaintext
aa
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aat
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abc
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abf
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absTol
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Acc
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Accelrys
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acceptor
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Acceptor
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acceptors
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accomodate
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accuracies
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ach
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achived
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achives
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ackland
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Ackland
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acolor
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acos
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Acta
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actinide
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adaptation
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addforce
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addtorque
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Adhikari
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adiam
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Adjiman
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adof
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adp
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Adri
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adusting
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advect
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advection
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advects
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afer
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affine
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Afshar
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agilio
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Agilio
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agni
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Ai
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Aidan
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aij
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airebo
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Aj
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ajaramil
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akohlmey
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Aktulga
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al
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alain
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Alain
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alat
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Albe
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alchemical
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AlCu
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Alderton
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Alejandre
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alessandro
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Alessandro
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aliceblue
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allocaters
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allosws
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AlO
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alond
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Alonso
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amap
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Amatrix
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Amit
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amu
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Amzallag
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Andzelm
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Ang
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angmom
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angmomx
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angmomy
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angmomz
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Angs
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anharmonic
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anharmonicity
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aniso
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anisotropic
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ansi
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antiquewhite
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Antisymmetrized
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antisymmetry
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Antonelli
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aperiodic
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api
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Appl
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Apu
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arccos
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arcsin
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arg
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args
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artefacts
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Arun
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asin
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Askari
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askoose
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asphere
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ASPHERE
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aspherical
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Asq
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assinged
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associdate
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Asta
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Astart
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Astop
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asub
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asubrama
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Asumming
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atan
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atc
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AtC
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ATC
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athomps
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atobody
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atomeye
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atomfile
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atomID
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atomistic
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atomt
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attogram
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attograms
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attrac
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Atw
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Atwater
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atwt
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augt
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AuO
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autocorrelation
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automagically
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Avalos
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avalue
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aveforce
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Avendano
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avi
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AVX
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awpmd
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AWPMD
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Axel
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Ay
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Ayton
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Az
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azimuthal
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ba
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Babadi
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backcolor
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backend
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Baczewski
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Bal
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balancer
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Balasubramanian
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Ballenegger
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Bammann
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Barashev
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barostat
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barostated
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barostating
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barostatted
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barostatting
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Barostatting
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barosttating
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Barrat
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Bartels
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barycenter
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barye
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Bashford
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Baskes
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Batra
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Bayly
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bb
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bcc
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bcolor
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bdiam
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Beckman
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behaviour
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Belak
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Bellott
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benchmarking
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Bennet
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Berardi
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Beraun
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berendsen
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Berendsen
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berger
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Berkowitz
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berlin
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Berne
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Beutler
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bgq
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Bh
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biaxial
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Biersack
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bigint
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bilayer
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bilayers
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binsize
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binstyle
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biomolecular
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biomolecule
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Biomolecules
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Biophys
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Biosym
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bisectioning
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bispectrum
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Bispectrum
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bitmapped
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bitrate
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bitrates
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Bitzek
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Blaise
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blanchedalmond
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blocksize
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blueviolet
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bn
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bni
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bodyflag
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bodystyle
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Bogaerts
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Bogusz
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Bohrs
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bondchk
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bondings
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bondmax
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bondtype
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Bonet
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boolean
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Boresch
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Botero
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Botu
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Bouguet
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bount
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boxcolor
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bpclermont
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br
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Branicio
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brennan
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Brilliantov
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Broadwell
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brownian
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brownw
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Bryantsev
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btype
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buckPlusAttr
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bugfixes
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Bulatov
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burlywood
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Bussi
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Buyl
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Bybee
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bz
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cadetblue
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caltech
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Caltech
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Campana
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Cao
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Capolungo
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Caro
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cartesian
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Cates
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cbecker
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CCu
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cd
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cdeam
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cdennist
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cdof
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ceil
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Ceil
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centre
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centro
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centroid
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Centroid
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centrosymmetry
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Cerda
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ceriotti
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Ceriotti
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Cerutti
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cfg
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CFG
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cfile
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CFL
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cgdna
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CGDNA
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cgs
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Chalopin
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Champaign
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charmm
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CHARMM
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checkmark
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checkqeq
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Cheng
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Chenoweth
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chiral
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chirality
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Cho
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Christoph
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Chu
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chunkID
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Ciccotti
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Cieplak
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Cii
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Cij
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cis
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civ
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clearstore
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Clebsch
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Clermont
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clo
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Clovertown
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cmap
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Cmax
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cmdlist
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Cmin
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cmm
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CMM
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cn
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cN
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Cn
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cna
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cnr
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coaxstk
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codebase
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coeff
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Coeff
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CoefficientN
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coeffs
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Coeffs
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Colberg
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coleman
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Colliex
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collinear
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colvars
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Colvars
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COLVARS
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comID
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Commun
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complier
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compressibility
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compressive
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Comput
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computable
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compute
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concetric
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cond
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Condens
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config
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configfile
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configurational
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conformational
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conjuction
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consiting
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continously
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Contrib
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coord
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Coord
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CoordN
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coords
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coprocessor
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coprocessors
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coreshell
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cornflowerblue
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cornsilk
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correlator
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cosineshifted
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cossq
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costheta
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Couette
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coul
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coulombic
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Coulombic
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Coulombics
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Coulommbic
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Courant
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covalent
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covalently
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covariance
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cpp
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cpu
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createatoms
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createAtoms
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Critchley
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crossterm
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crossterms
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Crozier
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crystallisation
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Crystallogr
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Csanyi
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csh
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cshrc
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CSiC
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csld
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cstyle
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csvr
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Ctypes
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cuda
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Cuda
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CUDA
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CuH
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cuthi
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cutinner
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cutlo
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cutmax
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cutoffA
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cutoffC
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cuu
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cv
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Cv
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Cval
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cvar
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cvff
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cwiggle
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Cygwin
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Cyrot
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cyrstals
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Daivis
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Dammak
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dampflag
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Darden
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darkblue
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darkcyan
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darkgoldenrod
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darkgray
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darkgreen
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darkkhaki
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darkmagenta
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darkolivegreen
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darkorange
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darkorchid
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darkred
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darksalmon
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darkseagreen
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darkslateblue
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darkslategray
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darkturquoise
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darkviolet
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Das
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Dasgupta
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datafile
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datums
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Davidchack
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Daw
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dcd
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de
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dE
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De
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debye
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Debye
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decompositions
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deeppink
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deepskyblue
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defauls
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defgrad
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deformable
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degress
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del
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Dellago
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delocalization
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delocalized
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delr
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deltaHf
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Dendrimer
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dendtritic
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Denniston
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dephase
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dephasing
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depositied
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dequidt
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Dequidt
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der
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Derjagin
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Derlet
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Deserno
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Destree
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detils
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Devanathan
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Devemy
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deviatoric
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Devine
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df
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dfftw
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DFT
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dia
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diag
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diagonalized
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Diallo
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diel
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differentiable
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diffusivity
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dihedral
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dihedrals
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Dihedrals
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dihydride
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Dij
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dimdim
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dimensionality
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dimgray
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dipolar
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dir
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Direc
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dirs
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discoverable
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discretization
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discretized
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disp
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displacment
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dissipative
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Dissipative
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distro
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divdes
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dl
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dlambda
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DLAMMPS
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dlopen
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dm
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dmax
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Dmax
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Dodds
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dodgerblue
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dof
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Donadio
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dotc
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Doty
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Doye
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dpd
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DPD
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dpdTheta
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DPhil
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dr
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dR
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dragforce
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Drautz
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dreiding
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Dreiding
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drfourth
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drho
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drsquared
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drude
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Drude
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DRUDE
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dsf
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dsmc
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dt
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du
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dU
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Dudarev
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Duin
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Dullweber
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Dunbrack
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Dunweg
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Dupont
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dUs
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dV
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dvector
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dVx
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dW
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dx
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dy
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dyne
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dynes
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Dyre
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Eaa
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Eaat
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Eacn
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eam
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eangle
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eatom
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Eba
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ebond
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ebt
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Ec
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ecoul
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ecp
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edihed
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edim
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edip
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edu
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ee
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Eebt
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eFF
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efield
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eflux
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Eggebrecht
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ehanced
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ehex
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eHEX
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Ei
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Eigensolve
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Eike
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eim
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eimp
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Eindhoven
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Ejtehadi
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El
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elaplong
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Electroneg
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electronegative
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electronegativity
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Eleftheriou
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ElementN
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elif
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Elj
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Ellad
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ellipsoidflag
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elong
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elt
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emacs
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Embt
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emi
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emol
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eN
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energetics
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energyCorr
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eng
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Engility
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engilitycorp
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engrot
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engtrans
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engvib
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enthalpy
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envoke
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eos
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epair
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epcc
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Epp
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Epq
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eps
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Epton
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eq
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eqch
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Eqp
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Eqq
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Eqs
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equi
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equil
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equilibrate
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|
equilibrated
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|
equilibrating
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|
equilibration
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Equilibria
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equilibribum
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|
equilization
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eradius
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|
erate
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erc
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erfc
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Erhart
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erorate
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erose
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erotate
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Ertas
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ervel
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esu
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esub
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et
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etag
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etap
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ethernet
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etol
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etot
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etotal
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Europhys
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ev
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eV
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evalue
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Evanseck
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evdwl
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Everaers
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|
evirials
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ewald
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Ewald
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excitations
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excv
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|
exe
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executables
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extrema
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ey
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ez
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factorizable
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|
factorizations
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Faken
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Farago
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Fasolino
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Fava
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fbMC
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Fc
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fcc
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fcm
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Fd
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fdotr
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|
fdt
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Fehlberg
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Fellinger
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femtosecond
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femtoseconds
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|
fene
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Fennell
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fep
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FEP
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fermi
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Fermionic
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Ferrand
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fexternal
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Fexternal
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ffield
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ffmpeg
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FFmpeg
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ffplay
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fft
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fftbench
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fftw
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fhg
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Fi
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figshare
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Fij
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filenname
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fileper
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Fincham
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Finchham
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Finnis
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Fiorin
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fixID
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fj
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Fji
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flagfld
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flagHI
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flaglog
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flagN
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flagVF
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fld
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floralwhite
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flv
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fmackay
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fmag
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fmass
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fmsec
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fN
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Fn
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fname
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fno
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foces
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Fock
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Fogarty
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Foiles
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fopenmp
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forcefield
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forestgreen
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formulae
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Fortran
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fourier
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fp
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fphi
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fPIC
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fplo
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Fqq
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Fraige
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framerate
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Fraunhofer
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Freitas
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Frenkel
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Friedrichs
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frontend
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Frontends
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fs
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fstyle
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ftol
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fugacity
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Fumi
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func
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funcs
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|
functionals
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funroll
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fx
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fy
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fz
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Gahler
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gainsboro
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Galindo
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gammaA
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gammaFactor
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gammaR
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Gan
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GaN
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ganzenmueller
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Ganzenmuller
|
|
Gao
|
|
Gathert
|
|
gauss
|
|
gaussian
|
|
Gaussians
|
|
Gavhane
|
|
gayberne
|
|
gcc
|
|
gcmc
|
|
gdot
|
|
GeC
|
|
georg
|
|
Georg
|
|
Germann
|
|
Germano
|
|
gerolf
|
|
Gerolf
|
|
gettimeofday
|
|
gewald
|
|
Gezelter
|
|
Gflop
|
|
gfortran
|
|
ghostwhite
|
|
Giacomo
|
|
gif
|
|
gifsicle
|
|
Gillan
|
|
Gingold
|
|
github
|
|
Github
|
|
gjf
|
|
gjwagne
|
|
gl
|
|
gld
|
|
gle
|
|
globbing
|
|
Glosli
|
|
Glotzer
|
|
gmail
|
|
gmake
|
|
gmask
|
|
Gmask
|
|
Gordan
|
|
GPa
|
|
gpu
|
|
gpuID
|
|
gpus
|
|
graining
|
|
Graining
|
|
Grama
|
|
grana
|
|
granregion
|
|
graphene
|
|
Greathouse
|
|
greenyellow
|
|
Greffet
|
|
grem
|
|
gREM
|
|
Grest
|
|
Grigera
|
|
grmask
|
|
Grmask
|
|
gromacs
|
|
Gromacs
|
|
Gronbech
|
|
Groot
|
|
groupbig
|
|
Grueneisen
|
|
gsmooth
|
|
gstyle
|
|
GTL
|
|
gui
|
|
guidline
|
|
Gumbsch
|
|
Gunsteren
|
|
Gunzenmuller
|
|
Guo
|
|
gwald
|
|
gz
|
|
gzipped
|
|
Haak
|
|
Hafskjold
|
|
Halperin
|
|
Hamaker
|
|
haptic
|
|
Hara
|
|
Harpertown
|
|
Harting
|
|
Hartree
|
|
Hartrees
|
|
Hasan
|
|
Hayoun
|
|
Hayre
|
|
hbcut
|
|
hbnewflag
|
|
hbond
|
|
hcp
|
|
heatconduction
|
|
Hebenstreit
|
|
Hecht
|
|
Heenen
|
|
Hendrik
|
|
Henin
|
|
Henkelman
|
|
henrich
|
|
Henrich
|
|
heristics
|
|
Herrmann
|
|
Hertizian
|
|
hertzian
|
|
Hertzsch
|
|
hexahedrons
|
|
hexatic
|
|
hexorder
|
|
Heyes
|
|
HfO
|
|
hgrid
|
|
Hibbs
|
|
Higdon
|
|
Hilger
|
|
histo
|
|
histogrammed
|
|
histogramming
|
|
hmaktulga
|
|
hoc
|
|
Hofling
|
|
Holian
|
|
Holm
|
|
holonomic
|
|
Homebrew
|
|
hooke
|
|
Hookean
|
|
hotpink
|
|
howto
|
|
Howto
|
|
Hoyt
|
|
hstyle
|
|
html
|
|
hTST
|
|
hu
|
|
hugoniostat
|
|
Hugoniostat
|
|
Hugoniot
|
|
Hura
|
|
hwloc
|
|
hydrogens
|
|
hydrostatic
|
|
hydrostatically
|
|
Hynninen
|
|
Hyoungki
|
|
hyperradius
|
|
hyperspherical
|
|
hyperthreaded
|
|
Hyperthreading
|
|
ibar
|
|
ibm
|
|
icc
|
|
icosohedral
|
|
idealgas
|
|
ideaology
|
|
IDR
|
|
ielement
|
|
ieni
|
|
ifdefs
|
|
iff
|
|
ifort
|
|
Ihle
|
|
ij
|
|
ijk
|
|
ijkl
|
|
ik
|
|
Ikeshoji
|
|
ilmenau
|
|
Ilmenau
|
|
Ilya
|
|
im
|
|
Im
|
|
imageint
|
|
Imageint
|
|
Imagemagick
|
|
imd
|
|
Impey
|
|
imporopers
|
|
impropers
|
|
Impropers
|
|
imroper
|
|
includelink
|
|
incompressible
|
|
incrementing
|
|
indenter
|
|
indenters
|
|
indianred
|
|
inertiax
|
|
inertiay
|
|
inertiaz
|
|
infty
|
|
inhomogeneities
|
|
inhomogeneous
|
|
init
|
|
initializations
|
|
InP
|
|
inregion
|
|
integrations
|
|
integrators
|
|
Integrators
|
|
intel
|
|
intelmpi
|
|
interal
|
|
interatomic
|
|
Interatomic
|
|
interconvert
|
|
intergation
|
|
interial
|
|
intermolecular
|
|
interstitials
|
|
intra
|
|
intramolecular
|
|
ints
|
|
inv
|
|
invariants
|
|
inversed
|
|
ionocovalent
|
|
iparam
|
|
ipi
|
|
ipp
|
|
IPython
|
|
Isele
|
|
isenthalpic
|
|
iso
|
|
isodemic
|
|
isoenergetic
|
|
isoenthalpic
|
|
isokinetic
|
|
isomorphism
|
|
isothermal
|
|
isotropically
|
|
isovolume
|
|
Isralewitz
|
|
iteratively
|
|
Ith
|
|
Itsets
|
|
itype
|
|
itypeN
|
|
Ivector
|
|
Iw
|
|
ixcm
|
|
ixx
|
|
Ixx
|
|
ixy
|
|
Ixy
|
|
ixz
|
|
Ixz
|
|
iy
|
|
iycm
|
|
iyy
|
|
Iyy
|
|
iyz
|
|
Iyz
|
|
iz
|
|
izcm
|
|
ized
|
|
Izrailev
|
|
Izumi
|
|
Izvekov
|
|
izz
|
|
Izz
|
|
Jacobsen
|
|
jagreat
|
|
james
|
|
Janssens
|
|
Jaramillo
|
|
Jarzynski
|
|
jatempl
|
|
jea
|
|
jec
|
|
Jeffers
|
|
jewett
|
|
Jewett
|
|
ji
|
|
Jiang
|
|
Jiao
|
|
jik
|
|
JIK
|
|
jku
|
|
Joannopoulos
|
|
Jochim
|
|
Jonsson
|
|
Jorgensen
|
|
jparam
|
|
jpeg
|
|
jpeglib
|
|
jpg
|
|
JPG
|
|
jpl
|
|
Jth
|
|
jtype
|
|
jtypeN
|
|
Julien
|
|
Jupyter
|
|
Justo
|
|
Jusufi
|
|
Jx
|
|
Jy
|
|
Jz
|
|
jzimmer
|
|
Kadiri
|
|
Kalia
|
|
Kamberaj
|
|
Kapfer
|
|
Karlsruhe
|
|
Karplus
|
|
Karttunen
|
|
kate
|
|
Kaufmann
|
|
Kayser
|
|
kb
|
|
kB
|
|
kbit
|
|
kbits
|
|
kcal
|
|
Kd
|
|
ke
|
|
KE
|
|
Keblinski
|
|
keflag
|
|
Keir
|
|
Kelchner
|
|
Kelkar
|
|
Kemper
|
|
Keyes
|
|
Khersonskii
|
|
Khvostov
|
|
Ki
|
|
kim
|
|
kJ
|
|
kk
|
|
Klahn
|
|
Klapp
|
|
Kloss
|
|
kmax
|
|
Kmax
|
|
knl
|
|
Kohlmeyer
|
|
kokkos
|
|
Kolafa
|
|
Kollman
|
|
Kondor
|
|
konglt
|
|
Koning
|
|
Kooser
|
|
Koskinen
|
|
Kosztin
|
|
Kp
|
|
Kraker
|
|
Kraus
|
|
Kremer
|
|
Kress
|
|
kspace
|
|
Kspace
|
|
KSpace
|
|
Kspring
|
|
kT
|
|
kth
|
|
Kth
|
|
Kub
|
|
Kubo
|
|
Kumagai
|
|
Kumar
|
|
Kuronen
|
|
Kusters
|
|
Kutta
|
|
kx
|
|
Lackmann
|
|
Ladd
|
|
lagrangian
|
|
lambdai
|
|
lamda
|
|
lammps
|
|
Lammps
|
|
LAMMPS
|
|
lammpsplot
|
|
Lamoureux
|
|
Landron
|
|
langevin
|
|
Langevin
|
|
Langston
|
|
larentzos
|
|
Larentzos
|
|
Laroche
|
|
lars
|
|
latencies
|
|
lattce
|
|
Laupretre
|
|
lavenderblush
|
|
lawngreen
|
|
lB
|
|
lbl
|
|
LBtype
|
|
lcbop
|
|
ld
|
|
ldfftw
|
|
ldg
|
|
Lechman
|
|
Lehoucq
|
|
Leimkuhler
|
|
leiu
|
|
lemonchiffon
|
|
Lenart
|
|
lennard
|
|
Lennard
|
|
Lenosky
|
|
Lett
|
|
Leuven
|
|
Lewy
|
|
lgvdw
|
|
Liang
|
|
libAtoms
|
|
libdir
|
|
libgpu
|
|
libjpeg
|
|
liblammps
|
|
Liblammps
|
|
liblink
|
|
libmeam
|
|
libmpi
|
|
libmpich
|
|
libpng
|
|
libpoems
|
|
librar
|
|
libreax
|
|
libs
|
|
ligand
|
|
lightblue
|
|
lightcoral
|
|
lightcyan
|
|
lightgoldenrodyellow
|
|
lightgreen
|
|
lightgrey
|
|
lightpink
|
|
lightsalmon
|
|
lightseagreen
|
|
lightskyblue
|
|
lightslategray
|
|
lightsteelblue
|
|
lightyellow
|
|
Likhtman
|
|
limegreen
|
|
Lindahl
|
|
lineflag
|
|
lineforce
|
|
linesearch
|
|
linux
|
|
Liouville
|
|
Lisal
|
|
listfile
|
|
Littmark
|
|
Liu
|
|
Livermore
|
|
lj
|
|
lm
|
|
lmp
|
|
lmpptr
|
|
lmpqst
|
|
lmpsdata
|
|
Lmpsdata
|
|
lmptype
|
|
ln
|
|
localTemp
|
|
localvectors
|
|
logfile
|
|
logfreq
|
|
logicals
|
|
Lomdahl
|
|
lookups
|
|
Lookups
|
|
LoopVar
|
|
Lorant
|
|
lossy
|
|
lps
|
|
lrt
|
|
lsfftw
|
|
ltbbmalloc
|
|
lubricateU
|
|
lucy
|
|
Lussetti
|
|
Lustig
|
|
lx
|
|
ly
|
|
Lybrand
|
|
Lyulin
|
|
lz
|
|
Mackay
|
|
Mackrodt
|
|
macroparticle
|
|
Madura
|
|
Magda
|
|
Maginn
|
|
mainboards
|
|
makefile
|
|
Makefile
|
|
makefiles
|
|
Makefiles
|
|
makelist
|
|
Makse
|
|
malloc
|
|
Malolepsza
|
|
Manby
|
|
Mandadapu
|
|
Manh
|
|
manifoldforce
|
|
Manolopoulos
|
|
manybody
|
|
MANYBODY
|
|
Maras
|
|
Marrink
|
|
Marsaglia
|
|
Marseille
|
|
Martyna
|
|
Mashayak
|
|
massless
|
|
masstotal
|
|
Matchett
|
|
matlab
|
|
matplotlib
|
|
Mattox
|
|
Mattson
|
|
maxangle
|
|
maxbond
|
|
maxeval
|
|
Maxfoo
|
|
maxit
|
|
maxiter
|
|
maxsize
|
|
maxspecial
|
|
maxSteps
|
|
maxX
|
|
mbt
|
|
Mbytes
|
|
MBytes
|
|
McLachlan
|
|
md
|
|
mdf
|
|
meam
|
|
meamf
|
|
mech
|
|
mechanice
|
|
mechanim
|
|
Mecke
|
|
mediumaquamarine
|
|
mediumblue
|
|
mediumorchid
|
|
mediumpurple
|
|
mediumseagreen
|
|
mediumslateblue
|
|
mediumspringgreen
|
|
mediumturquoise
|
|
mediumvioletred
|
|
Mees
|
|
Mehl
|
|
Mei
|
|
Meloni
|
|
Melrose
|
|
Mem
|
|
memalign
|
|
MEMALIGN
|
|
membered
|
|
Mendelev
|
|
mer
|
|
Meremianin
|
|
Merz
|
|
mescscopic
|
|
meshless
|
|
meso
|
|
mesocopic
|
|
mesoparticle
|
|
mesoscale
|
|
mesoscopic
|
|
metadynamics
|
|
Metadynamics
|
|
methine
|
|
Metin
|
|
Mezei
|
|
mgpt
|
|
MGPT
|
|
mgptfast
|
|
mh
|
|
micelle
|
|
michael
|
|
michele
|
|
Mickel
|
|
microcanonical
|
|
microelastic
|
|
microporous
|
|
Microscale
|
|
microsec
|
|
midnightblue
|
|
mie
|
|
Mie
|
|
Mikami
|
|
Militzer
|
|
Minary
|
|
mincap
|
|
minima
|
|
minimizations
|
|
minimizer
|
|
minimizers
|
|
minorder
|
|
minSteps
|
|
mintcream
|
|
Mintmire
|
|
mis
|
|
Mises
|
|
Mishin
|
|
Mishra
|
|
mistyped
|
|
mistyrose
|
|
Mj
|
|
mK
|
|
mkdir
|
|
mkv
|
|
mlparks
|
|
mlutiple
|
|
modc
|
|
Modell
|
|
modelled
|
|
modelling
|
|
Modelling
|
|
Modine
|
|
mol
|
|
Mol
|
|
molfile
|
|
Molfile
|
|
moltemplate
|
|
momoner
|
|
Monaghan
|
|
Monaghans
|
|
monodisperse
|
|
monodispersity
|
|
monovalent
|
|
Montalenti
|
|
Montero
|
|
Morefoo
|
|
morris
|
|
Morriss
|
|
morse
|
|
Moseler
|
|
Moskalev
|
|
mov
|
|
mpi
|
|
Mpi
|
|
MPI
|
|
mpicc
|
|
mpich
|
|
mpicxx
|
|
mpiexec
|
|
mpiio
|
|
mpirun
|
|
mplayer
|
|
mscg
|
|
MSCG
|
|
msd
|
|
msi
|
|
MSI
|
|
msm
|
|
msse
|
|
msst
|
|
Mtchell
|
|
Mth
|
|
mtk
|
|
Mtotal
|
|
Muccioli
|
|
Mukherjee
|
|
Mulders
|
|
multibody
|
|
Multibody
|
|
multicenter
|
|
multicmd
|
|
multicore
|
|
multielectron
|
|
multinode
|
|
multiphysics
|
|
multiscale
|
|
multisectioning
|
|
multithreading
|
|
Multithreading
|
|
Mundy
|
|
Murdick
|
|
Murtola
|
|
Murty
|
|
Muser
|
|
mutli
|
|
mutliple
|
|
muVT
|
|
mux
|
|
muy
|
|
muz
|
|
mv
|
|
mV
|
|
Mvapich
|
|
MxN
|
|
myCompute
|
|
myIndex
|
|
mylammps
|
|
mysocket
|
|
myTemp
|
|
myVec
|
|
nabla
|
|
Nakano
|
|
namespace
|
|
namespaces
|
|
NaN
|
|
Nangletype
|
|
nangletypes
|
|
Nangletypes
|
|
nano
|
|
nanoindentation
|
|
Nanoletters
|
|
nanometer
|
|
nanometers
|
|
nanoparticles
|
|
nanosec
|
|
Narulkar
|
|
nasa
|
|
nasr
|
|
Natoli
|
|
natoms
|
|
Natoms
|
|
Nattempt
|
|
navajowhite
|
|
Navier
|
|
nb
|
|
Nbin
|
|
Nbins
|
|
nbody
|
|
Nbody
|
|
nbondtype
|
|
Nbondtype
|
|
nbondtypes
|
|
Nbondtypes
|
|
nBOt
|
|
nbrhood
|
|
Nbtypes
|
|
nc
|
|
Nc
|
|
nchunk
|
|
Nchunk
|
|
ncoeff
|
|
ncorr
|
|
ncount
|
|
nd
|
|
Ndihedraltype
|
|
Ndirango
|
|
ndof
|
|
Ndof
|
|
Ndouble
|
|
ndx
|
|
neb
|
|
Neelov
|
|
neighbouring
|
|
nelem
|
|
Nelement
|
|
Nelements
|
|
nemd
|
|
netcdf
|
|
Neumann
|
|
nevery
|
|
Nevery
|
|
Newns
|
|
newtype
|
|
Neyts
|
|
Nf
|
|
nfile
|
|
Nfile
|
|
Nfreq
|
|
ng
|
|
Ng
|
|
nghost
|
|
Nghost
|
|
Ngpu
|
|
nh
|
|
nharmonic
|
|
nhc
|
|
NiAlH
|
|
Nicklas
|
|
Nimpropertype
|
|
Ninteger
|
|
Nissila
|
|
nist
|
|
nitrides
|
|
niu
|
|
Nk
|
|
nl
|
|
nlen
|
|
Nlines
|
|
nlocal
|
|
Nlocal
|
|
Nlog
|
|
nm
|
|
Nm
|
|
Nmax
|
|
Nmin
|
|
Nmols
|
|
nn
|
|
Nocedal
|
|
nocite
|
|
nocoeff
|
|
nodeless
|
|
noforce
|
|
Noid
|
|
Nonbond
|
|
nonbonded
|
|
nonequilibrium
|
|
nongauss
|
|
nonGaussian
|
|
nonlocal
|
|
Nonlocal
|
|
Noordhoek
|
|
nopreliminary
|
|
Nord
|
|
norder
|
|
Nordlund
|
|
normals
|
|
Noskov
|
|
noslip
|
|
noticable
|
|
noutcol
|
|
Noutput
|
|
noutrow
|
|
Novik
|
|
Novint
|
|
np
|
|
Npair
|
|
Npairs
|
|
nparticle
|
|
npernode
|
|
nph
|
|
NpH
|
|
Nphi
|
|
nphug
|
|
nprocs
|
|
Nprocs
|
|
npt
|
|
nr
|
|
Nr
|
|
Nrecompute
|
|
Nrepeat
|
|
nreset
|
|
Nrho
|
|
nrun
|
|
Ns
|
|
Nsample
|
|
nsec
|
|
Nskip
|
|
nsq
|
|
Nstart
|
|
nstats
|
|
Nstep
|
|
Nsteplast
|
|
Nstop
|
|
Nswap
|
|
Nt
|
|
Ntable
|
|
ntheta
|
|
nthreads
|
|
Ntptask
|
|
Ntype
|
|
ntypes
|
|
Ntypes
|
|
nucleotides
|
|
nulcear
|
|
num
|
|
numa
|
|
numactl
|
|
numerics
|
|
numpy
|
|
Numpy
|
|
Nvalue
|
|
Nvaluelast
|
|
Nvalues
|
|
nvc
|
|
nvcc
|
|
nve
|
|
nvidia
|
|
Nvidia
|
|
nvk
|
|
nvt
|
|
Nwait
|
|
nx
|
|
Nx
|
|
nxnodes
|
|
ny
|
|
Ny
|
|
nz
|
|
Nz
|
|
octahedral
|
|
octants
|
|
ohenrich
|
|
ok
|
|
OKeefe
|
|
OKeefe
|
|
O'Keefe
|
|
oldlace
|
|
Oleinik
|
|
Olfason
|
|
olivedrab
|
|
Ollila
|
|
omegaDD
|
|
omegax
|
|
omegay
|
|
omegaz
|
|
omp
|
|
OMP
|
|
onelevel
|
|
oneway
|
|
onn
|
|
ons
|
|
OO
|
|
openKIM
|
|
OpenMP
|
|
opls
|
|
Oppelstrup
|
|
optionns
|
|
orangered
|
|
orderomg
|
|
organised
|
|
organometallic
|
|
orientational
|
|
orientorder
|
|
Orlikowski
|
|
ornl
|
|
Ornstein
|
|
Orsi
|
|
orthonormal
|
|
orthorhombic
|
|
ot
|
|
Ouldridge
|
|
outmost
|
|
outpur
|
|
outputss
|
|
outut
|
|
overlayed
|
|
overviewed
|
|
Ovito
|
|
oxdna
|
|
oxDNA
|
|
oxygens
|
|
padua
|
|
Padua
|
|
palegoldenrod
|
|
palegreen
|
|
paleturquoise
|
|
palevioletred
|
|
Panagiotopoulos
|
|
Pandit
|
|
Papaconstantopoulos
|
|
papayawhip
|
|
paquay
|
|
Paquay
|
|
parallelepiped
|
|
parallelipiped
|
|
Parallelizable
|
|
parallelization
|
|
parallelized
|
|
parallelizing
|
|
param
|
|
parameterization
|
|
parameterizations
|
|
parameterize
|
|
parameterized
|
|
parametrization
|
|
parametrized
|
|
params
|
|
Parinello
|
|
parmin
|
|
Parrinello
|
|
Partay
|
|
partices
|
|
Particuology
|
|
pastewka
|
|
Pastewka
|
|
Pattnaik
|
|
Pavese
|
|
pbc
|
|
pc
|
|
pchain
|
|
Pchain
|
|
Pdamp
|
|
pdb
|
|
pdf
|
|
pdim
|
|
pe
|
|
Peachey
|
|
peachpuff
|
|
Pearlman
|
|
Pedersen
|
|
Peng
|
|
peratom
|
|
perfoms
|
|
Pergamon
|
|
peri
|
|
Peridymaics
|
|
peridynamic
|
|
Peridynamic
|
|
peridynamics
|
|
Peridynamics
|
|
permittivity
|
|
Perram
|
|
persp
|
|
Persp
|
|
peru
|
|
Peskin
|
|
Pettifor
|
|
pfactor
|
|
ph
|
|
Phillpot
|
|
phonon
|
|
phophorous
|
|
phosphide
|
|
Physica
|
|
physik
|
|
picocoulomb
|
|
picocoulombs
|
|
picogram
|
|
picograms
|
|
picosecond
|
|
picoseconds
|
|
picosend
|
|
pid
|
|
Pieter
|
|
pimd
|
|
Pisarev
|
|
Pishevar
|
|
Pitera
|
|
pj
|
|
pjintve
|
|
planeforce
|
|
Plathe
|
|
Plimpton
|
|
plog
|
|
ploop
|
|
PloS
|
|
plt
|
|
pmb
|
|
pN
|
|
png
|
|
Poiseuille
|
|
Polak
|
|
polarizabilities
|
|
polarizability
|
|
polarizable
|
|
Polarizable
|
|
polarizables
|
|
Politano
|
|
polyA
|
|
polybond
|
|
polydisperse
|
|
polydispersity
|
|
popen
|
|
popstore
|
|
pos
|
|
Poschel
|
|
posix
|
|
Postma
|
|
postprocessing
|
|
potin
|
|
Pourtois
|
|
powderblue
|
|
ppn
|
|
pppm
|
|
prd
|
|
pre
|
|
Pre
|
|
prec
|
|
preexponential
|
|
prefactor
|
|
prefactors
|
|
prepend
|
|
preprint
|
|
preprocessor
|
|
printf
|
|
printflag
|
|
Priya
|
|
proc
|
|
Proc
|
|
procs
|
|
Prony
|
|
ps
|
|
Ps
|
|
pscreen
|
|
pscrozi
|
|
psec
|
|
pseudodynamics
|
|
pseudopotential
|
|
Pstart
|
|
Pstop
|
|
pstyle
|
|
Ptarget
|
|
pthread
|
|
pthreads
|
|
ptr
|
|
pu
|
|
purdue
|
|
pushded
|
|
pushstore
|
|
pvar
|
|
pw
|
|
px
|
|
Px
|
|
pxx
|
|
Pxx
|
|
Pxy
|
|
py
|
|
Py
|
|
pydir
|
|
pylammps
|
|
PyLammps
|
|
pymol
|
|
pypar
|
|
Pyy
|
|
pz
|
|
Pz
|
|
Pzz
|
|
qbmsst
|
|
qcore
|
|
qdist
|
|
qE
|
|
qeq
|
|
QeQ
|
|
QEq
|
|
qfile
|
|
qi
|
|
Qi
|
|
qj
|
|
Qj
|
|
Ql
|
|
qm
|
|
Qmin
|
|
qmmm
|
|
qmol
|
|
qoffload
|
|
qopenmp
|
|
qoverride
|
|
qtb
|
|
Quant
|
|
quantic
|
|
quartic
|
|
quaternion
|
|
quaternions
|
|
quati
|
|
quatj
|
|
quatk
|
|
quatw
|
|
Queteschiner
|
|
radian
|
|
radians
|
|
Rafferty
|
|
rahman
|
|
Rahman
|
|
Raman
|
|
ramped
|
|
Ramprasad
|
|
randomizations
|
|
Raphson
|
|
Rappe
|
|
Ravelo
|
|
rc
|
|
Rc
|
|
Rcm
|
|
Rcmx
|
|
Rcmy
|
|
Rcut
|
|
rcutfac
|
|
rdc
|
|
rdf
|
|
README
|
|
realtime
|
|
reamin
|
|
reax
|
|
ReaxFF
|
|
rebalance
|
|
rebalancing
|
|
rebo
|
|
recentered
|
|
recentering
|
|
recursing
|
|
Ree
|
|
regoin
|
|
Reinders
|
|
relect
|
|
relesed
|
|
relTol
|
|
remappings
|
|
remediate
|
|
Ren
|
|
Rendon
|
|
reneighboring
|
|
Reneighboring
|
|
reneighborings
|
|
Rensselaer
|
|
reparametrizing
|
|
representable
|
|
repuls
|
|
rescale
|
|
rescaled
|
|
rescales
|
|
rescaling
|
|
Rescaling
|
|
respa
|
|
RESPA
|
|
respecified
|
|
responder
|
|
resquared
|
|
REsquared
|
|
restartfile
|
|
rethrowing
|
|
rewrap
|
|
rezwanur
|
|
rfac
|
|
rfile
|
|
rg
|
|
Rg
|
|
Rhaphson
|
|
rheological
|
|
rhodo
|
|
Rhodo
|
|
rhodopsin
|
|
rhosum
|
|
Ri
|
|
Ribiere
|
|
richard
|
|
rigidID
|
|
rigidify
|
|
rij
|
|
Rij
|
|
RIj
|
|
Rin
|
|
Rino
|
|
RiRj
|
|
Risi
|
|
Rix
|
|
Riy
|
|
rj
|
|
Rj
|
|
Rjk
|
|
rjones
|
|
rk
|
|
rkf
|
|
rmask
|
|
Rmask
|
|
rmax
|
|
Rmax
|
|
rmdir
|
|
rmin
|
|
Rmin
|
|
RMS
|
|
rNEMD
|
|
ro
|
|
Rockett
|
|
Ronchetti
|
|
Rosati
|
|
Rossky
|
|
rosybrown
|
|
rotationally
|
|
rotationsl
|
|
royalblue
|
|
rozero
|
|
Rperp
|
|
rRESPA
|
|
Rspace
|
|
Rubia
|
|
Rudd
|
|
Rudra
|
|
Rudranarayan
|
|
Runge
|
|
runtime
|
|
Rutuparna
|
|
rx
|
|
Ryckaert
|
|
Rycroft
|
|
Rydbergs
|
|
Rz
|
|
saddlebrown
|
|
Sadigh
|
|
saed
|
|
safezone
|
|
Safran
|
|
Sagui
|
|
Salles
|
|
sandia
|
|
Sandia
|
|
sandybrown
|
|
sc
|
|
scalability
|
|
scalable
|
|
Scalable
|
|
scalexy
|
|
scalexz
|
|
scaleyz
|
|
Schaik
|
|
Schlitter
|
|
Schmid
|
|
Schoen
|
|
Schulten
|
|
Schunk
|
|
Schwen
|
|
scriping
|
|
Scripta
|
|
sdk
|
|
seagreen
|
|
Secor
|
|
sed
|
|
segmental
|
|
sellerio
|
|
Sellerio
|
|
semiaxes
|
|
semimetals
|
|
Semin
|
|
Sensable
|
|
setfl
|
|
setforce
|
|
setmask
|
|
Setmask
|
|
setpoint
|
|
setvel
|
|
severeal
|
|
sfftw
|
|
Sg
|
|
Shan
|
|
shapex
|
|
shapey
|
|
shapez
|
|
shapshot
|
|
shardlow
|
|
Shardlow
|
|
shawn
|
|
Shen
|
|
Shenderova
|
|
Shiga
|
|
Shinoda
|
|
shockvel
|
|
shoule
|
|
si
|
|
SiC
|
|
Siepmann
|
|
Sij
|
|
Sikandar
|
|
Silbert
|
|
Silling
|
|
Simul
|
|
simulataneous
|
|
simulations
|
|
Sinnott
|
|
sinusoid
|
|
sinusoidally
|
|
SiO
|
|
Sirk
|
|
Sival
|
|
sizeI
|
|
sizeJ
|
|
sizex
|
|
sjplimp
|
|
sjtu
|
|
skyblue
|
|
slateblue
|
|
slategray
|
|
slater
|
|
Slepoy
|
|
sligthly
|
|
Sliozberg
|
|
sllod
|
|
smallint
|
|
Smallint
|
|
smd
|
|
SMD
|
|
smi
|
|
Smirichinski
|
|
Smit
|
|
smtbq
|
|
sna
|
|
snad
|
|
snapcoeff
|
|
snaphots
|
|
snapparam
|
|
snav
|
|
Sodani
|
|
Soderlind
|
|
softed
|
|
solvated
|
|
Sorensen
|
|
soundspeed
|
|
Souza
|
|
sp
|
|
spacings
|
|
Spearot
|
|
Spellmeyer
|
|
sph
|
|
SPH
|
|
spheriods
|
|
spparks
|
|
Springer
|
|
springgreen
|
|
sqrt
|
|
src
|
|
srd
|
|
Srolovitz
|
|
srp
|
|
srun
|
|
ss
|
|
ssao
|
|
stamoore
|
|
stanford
|
|
Starikov
|
|
startstep
|
|
Startstep
|
|
statcoul
|
|
statcoulombs
|
|
statvolt
|
|
stdin
|
|
steelblue
|
|
Stegailov
|
|
Steinhardt
|
|
Steinhauser
|
|
Stepaniants
|
|
stepwise
|
|
Stesmans
|
|
Stillinger
|
|
stk
|
|
Stockmayer
|
|
Stoddard
|
|
stoichiometric
|
|
stoichiometry
|
|
Stokesian
|
|
Stoll
|
|
stopstep
|
|
Stouch
|
|
Straatsma
|
|
Stratford
|
|
Straub
|
|
strcmp
|
|
streitz
|
|
Streitz
|
|
Streiz
|
|
strided
|
|
strietz
|
|
Stukowski
|
|
stylecomputes
|
|
Su
|
|
subbox
|
|
subcutoff
|
|
subdirectory
|
|
subdomains
|
|
subinterval
|
|
subintervals
|
|
Subramaniyan
|
|
subscripted
|
|
subscripting
|
|
substeps
|
|
substyle
|
|
substyles
|
|
sudo
|
|
Sukumaran
|
|
sumsq
|
|
Sunderland
|
|
superset
|
|
supersphere
|
|
Supinski
|
|
surc
|
|
surfactants
|
|
sw
|
|
Swegat
|
|
swiggle
|
|
Swiler
|
|
Swol
|
|
Swope
|
|
Sx
|
|
sy
|
|
Sy
|
|
symplectic
|
|
Synechococcus
|
|
sys
|
|
sysdim
|
|
sysmte
|
|
Syst
|
|
Sz
|
|
Tabbernor
|
|
tabinner
|
|
Tadmor
|
|
tagint
|
|
Tait
|
|
taitwater
|
|
Tajkhorshid
|
|
tanh
|
|
taskset
|
|
taubi
|
|
tchain
|
|
Tchain
|
|
Tcom
|
|
tcsh
|
|
tdamp
|
|
Tdrude
|
|
Technolgy
|
|
Telsa
|
|
tempCorrCoeff
|
|
templated
|
|
Templeton
|
|
ters
|
|
tersoff
|
|
Tersoff
|
|
tesselation
|
|
tesselations
|
|
Tetot
|
|
tex
|
|
tfmc
|
|
tfMC
|
|
th
|
|
Thakkar
|
|
Thakker
|
|
thb
|
|
thei
|
|
Theor
|
|
thermalization
|
|
thermalize
|
|
thermalized
|
|
thermalizing
|
|
thermo
|
|
thermochemical
|
|
thermochemistry
|
|
thermodynamic
|
|
thermodynamically
|
|
Thermophysical
|
|
thermostate
|
|
thermostated
|
|
thermostates
|
|
thermostating
|
|
Thermostating
|
|
thermostatted
|
|
thermostatting
|
|
Thermostatting
|
|
Thes
|
|
Thess
|
|
Thexe
|
|
Thijsse
|
|
Thirumalai
|
|
threebody
|
|
thrid
|
|
thylakoid
|
|
THz
|
|
Tij
|
|
Tildesley
|
|
timespan
|
|
timestamp
|
|
timestamps
|
|
timestep
|
|
timestepping
|
|
timesteps
|
|
TiN
|
|
TiO
|
|
Tirrell
|
|
Titer
|
|
Tji
|
|
Tk
|
|
Tkin
|
|
tloop
|
|
tlsph
|
|
tmax
|
|
Tmax
|
|
tmd
|
|
Tmin
|
|
tmp
|
|
tN
|
|
Tobias
|
|
tol
|
|
topologies
|
|
Torder
|
|
torsions
|
|
Tosi
|
|
Toukmaji
|
|
Toxvaerd
|
|
tpa
|
|
tpc
|
|
tptask
|
|
tqx
|
|
tqy
|
|
tqz
|
|
tradeoff
|
|
traj
|
|
transferability
|
|
translational
|
|
trate
|
|
Tref
|
|
Tretyakov
|
|
tri
|
|
triangleflag
|
|
triclinic
|
|
triflag
|
|
trigonal
|
|
trilinear
|
|
tripflag
|
|
tris
|
|
trj
|
|
trott
|
|
Trott
|
|
Trung
|
|
tscale
|
|
Tschopp
|
|
Tsige
|
|
Tsrd
|
|
Tstart
|
|
tstat
|
|
Tstop
|
|
Tsuzuki
|
|
Tt
|
|
TThis
|
|
ttm
|
|
tu
|
|
Tuckerman
|
|
tue
|
|
Turkand
|
|
Tutein
|
|
twobody
|
|
twojmax
|
|
Tx
|
|
txt
|
|
typeI
|
|
typeJ
|
|
typeN
|
|
Tz
|
|
Tzou
|
|
ub
|
|
Uberuaga
|
|
uChem
|
|
uCond
|
|
Uhlenbeck
|
|
Ui
|
|
uk
|
|
ul
|
|
uloop
|
|
ulsph
|
|
uMech
|
|
umin
|
|
Umin
|
|
un
|
|
unary
|
|
unbonded
|
|
uncomment
|
|
uncompute
|
|
underprediction
|
|
undump
|
|
uniaxial
|
|
uniaxially
|
|
unimodal
|
|
unitless
|
|
Universite
|
|
unix
|
|
unoptimized
|
|
unpadded
|
|
unphysical
|
|
unphysically
|
|
unscaled
|
|
unsets
|
|
unshifted
|
|
unsmoothed
|
|
unsolvated
|
|
unsplit
|
|
unstrained
|
|
untar
|
|
untilted
|
|
upenn
|
|
upto
|
|
Urbana
|
|
usec
|
|
userguide
|
|
usr
|
|
util
|
|
utils
|
|
utsa
|
|
Uttormark
|
|
uvm
|
|
uwo
|
|
vacf
|
|
valent
|
|
Valeriu
|
|
valgrind
|
|
Valone
|
|
valuev
|
|
Valuev
|
|
valus
|
|
valuse
|
|
Varshalovich
|
|
Varshney
|
|
vashishta
|
|
Vashishta
|
|
vcm
|
|
Vcm
|
|
vdim
|
|
vdisplace
|
|
vec
|
|
vectorial
|
|
vectorization
|
|
vectorized
|
|
Vectorized
|
|
vel
|
|
velocites
|
|
Verlag
|
|
verlet
|
|
Verlet
|
|
ves
|
|
vhi
|
|
vibrational
|
|
Vij
|
|
Vikas
|
|
virial
|
|
Virial
|
|
virialmode
|
|
virials
|
|
virtualenv
|
|
virutal
|
|
viscoelastic
|
|
viscoelasticity
|
|
viscosities
|
|
viscously
|
|
vizplotgui
|
|
Vj
|
|
vlo
|
|
vmax
|
|
vmd
|
|
VMDARCH
|
|
VMDHOME
|
|
vn
|
|
Voigt
|
|
volfactor
|
|
volpress
|
|
volumetric
|
|
von
|
|
Voro
|
|
Vorobyov
|
|
voronoi
|
|
Voronoi
|
|
VORONOI
|
|
Vorselaars
|
|
Voth
|
|
vpz
|
|
vratio
|
|
Vries
|
|
Vstream
|
|
vtarget
|
|
vtk
|
|
VTK
|
|
vtp
|
|
vtr
|
|
vtu
|
|
vv
|
|
vx
|
|
Vx
|
|
vxcm
|
|
vy
|
|
Vy
|
|
vycm
|
|
vz
|
|
Vz
|
|
vzcm
|
|
vzi
|
|
Waals
|
|
Wadley
|
|
wallstyle
|
|
walltime
|
|
warmup
|
|
wavefunction
|
|
wavepacket
|
|
wavepackets
|
|
wavevector
|
|
wB
|
|
Wbody
|
|
Weckner
|
|
Wennberg
|
|
Westview
|
|
Whelan
|
|
whenthe
|
|
whitesmoke
|
|
whitespace
|
|
Wi
|
|
Wicaksono
|
|
wih
|
|
Wirnsberger
|
|
wirtes
|
|
witin
|
|
wn
|
|
Wolde
|
|
Worley
|
|
Wriggers
|
|
Wurtzite
|
|
www
|
|
wx
|
|
Wx
|
|
wy
|
|
Wy
|
|
wz
|
|
Wz
|
|
xa
|
|
xAVX
|
|
xb
|
|
Xc
|
|
xcm
|
|
Xcm
|
|
xCORE
|
|
Xeon
|
|
xflag
|
|
xhi
|
|
xHost
|
|
Xiaowang
|
|
xk
|
|
xlat
|
|
xlo
|
|
xmax
|
|
Xmax
|
|
xmgrace
|
|
xMIC
|
|
xmovie
|
|
Xmovie
|
|
xmu
|
|
Xmu
|
|
XP
|
|
XPlor
|
|
xrd
|
|
xs
|
|
xstk
|
|
xsu
|
|
xtc
|
|
xu
|
|
Xu
|
|
xy
|
|
xyz
|
|
xz
|
|
xzhou
|
|
Yamada
|
|
Ybar
|
|
ybox
|
|
Yc
|
|
ycm
|
|
Yeh
|
|
yellowgreen
|
|
yflag
|
|
yhi
|
|
yi
|
|
ylat
|
|
ylo
|
|
Yoshida
|
|
ys
|
|
ysu
|
|
yu
|
|
Yu
|
|
yukawa
|
|
Yukawa
|
|
yx
|
|
yy
|
|
yz
|
|
Zannoni
|
|
zbl
|
|
ZBL
|
|
Zc
|
|
zcm
|
|
Zepeda
|
|
zflag
|
|
Zhang
|
|
zhi
|
|
Zhou
|
|
Zhu
|
|
zi
|
|
Zi
|
|
ziegenhain
|
|
Ziegenhain
|
|
Zj
|
|
zlim
|
|
zlo
|
|
zN
|
|
zs
|
|
zsu
|
|
zu
|
|
zx
|
|
zy
|
|
Zybin
|
|
zz
|