forked from lijiext/lammps
886 lines
36 KiB
CMake
886 lines
36 KiB
CMake
########################################
|
|
# CMake build system
|
|
# This file is part of LAMMPS
|
|
# Created by Christoph Junghans and Richard Berger
|
|
cmake_minimum_required(VERSION 2.8.12)
|
|
|
|
project(lammps CXX)
|
|
set(SOVERSION 0)
|
|
set(LAMMPS_SOURCE_DIR ${CMAKE_CURRENT_SOURCE_DIR}/../src)
|
|
set(LAMMPS_LIB_SOURCE_DIR ${CMAKE_CURRENT_SOURCE_DIR}/../lib)
|
|
set(LAMMPS_LIB_BINARY_DIR ${CMAKE_BINARY_DIR}/lib)
|
|
|
|
#To not conflict with old Makefile build system, we build everything here
|
|
file(GLOB LIB_SOURCES ${LAMMPS_SOURCE_DIR}/*.cpp)
|
|
file(GLOB LMP_SOURCES ${LAMMPS_SOURCE_DIR}/main.cpp)
|
|
list(REMOVE_ITEM LIB_SOURCES ${LMP_SOURCES})
|
|
|
|
# Cmake modules/macros are in a subdirectory to keep this file cleaner
|
|
set(CMAKE_MODULE_PATH ${CMAKE_CURRENT_SOURCE_DIR}/Modules)
|
|
|
|
if(NOT CMAKE_BUILD_TYPE AND NOT CMAKE_CXX_FLAGS)
|
|
#release comes with -O3 by default
|
|
set(CMAKE_BUILD_TYPE Release CACHE STRING "Choose the type of build, options are: None Debug Release RelWithDebInfo MinSizeRel." FORCE)
|
|
endif(NOT CMAKE_BUILD_TYPE AND NOT CMAKE_CXX_FLAGS)
|
|
|
|
file(GLOB SRC_FILES ${LAMMPS_SOURCE_DIR}/*.cpp)
|
|
list(SORT SRC_FILES)
|
|
# check for files installed by make-based buildsystem
|
|
# only run this time consuming check if there are new files
|
|
if(NOT SRC_FILES STREQUAL SRC_FILES_CACHED)
|
|
file(GLOB SRC_PKG_FILES ${LAMMPS_SOURCE_DIR}/*/*.cpp)
|
|
message(STATUS "Running check for installed package (this might take a while)")
|
|
foreach(_SRC SRC_PKG_FILES)
|
|
get_filename_component(FILENAME "${_SRC}" NAME)
|
|
if(EXISTS ${LAMMPS_SOURCE_DIR}/${FILENAME})
|
|
message(FATAL_ERROR "Found packages installed by the make-based buildsystem, please run 'make -C ${LAMMPS_SOURCE_DIR} no-all purge'")
|
|
endif()
|
|
endforeach()
|
|
set(SRC_FILES_CACHED "${SRC_FILES}" CACHE INTERNAL "List of file in LAMMPS_SOURCE_DIR" FORCE)
|
|
endif()
|
|
|
|
######################################################################
|
|
# compiler tests
|
|
# these need ot be done early (before further tests).
|
|
#####################################################################
|
|
include(CheckCCompilerFlag)
|
|
|
|
if (${CMAKE_CXX_COMPILER_ID} STREQUAL "Intel")
|
|
set (CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -restrict")
|
|
endif()
|
|
|
|
########################################################################
|
|
# User input options #
|
|
########################################################################
|
|
option(BUILD_SHARED_LIBS "Build shared libs" OFF)
|
|
if(BUILD_SHARED_LIBS) # for all pkg libs, mpi_stubs and linalg
|
|
set(CMAKE_POSITION_INDEPENDENT_CODE ON)
|
|
endif()
|
|
option(DEVELOPER_MODE "Enable developer mode" OFF)
|
|
mark_as_advanced(DEVELOPER_MODE)
|
|
option(CMAKE_VERBOSE_MAKEFILE "Generate verbose Makefiles" OFF)
|
|
include(GNUInstallDirs)
|
|
|
|
set(LAMMPS_LINK_LIBS)
|
|
set(LAMMPS_DEPS)
|
|
set(LAMMPS_API_DEFINES)
|
|
|
|
find_package(MPI QUIET)
|
|
option(BUILD_MPI "Build MPI version" ${MPI_FOUND})
|
|
if(BUILD_MPI)
|
|
find_package(MPI REQUIRED)
|
|
include_directories(${MPI_CXX_INCLUDE_PATH})
|
|
list(APPEND LAMMPS_LINK_LIBS ${MPI_CXX_LIBRARIES})
|
|
option(LAMMPS_LONGLONG_TO_LONG "Workaround if your system or MPI version does not recognize 'long long' data types" OFF)
|
|
if(LAMMPS_LONGLONG_TO_LONG)
|
|
add_definitions(-DLAMMPS_LONGLONG_TO_LONG)
|
|
endif()
|
|
else()
|
|
enable_language(C)
|
|
file(GLOB MPI_SOURCES ${LAMMPS_SOURCE_DIR}/STUBS/mpi.c)
|
|
add_library(mpi_stubs STATIC ${MPI_SOURCES})
|
|
include_directories(${LAMMPS_SOURCE_DIR}/STUBS)
|
|
list(APPEND LAMMPS_LINK_LIBS mpi_stubs)
|
|
endif()
|
|
|
|
set(LAMMPS_SIZE_LIMIT "LAMMPS_SMALLBIG" CACHE STRING "Lammps size limit")
|
|
set_property(CACHE LAMMPS_SIZE_LIMIT PROPERTY STRINGS LAMMPS_SMALLBIG LAMMPS_BIGBIG LAMMPS_SMALLSMALL)
|
|
add_definitions(-D${LAMMPS_SIZE_LIMIT})
|
|
set(LAMMPS_API_DEFINES "${LAMMPS_API_DEFINES} -D${LAMMPS_SIZE_LIMIT}")
|
|
|
|
set(LAMMPS_MEMALIGN "64" CACHE STRING "enables the use of the posix_memalign() call instead of malloc() when large chunks or memory are allocated by LAMMPS")
|
|
add_definitions(-DLAMMPS_MEMALIGN=${LAMMPS_MEMALIGN})
|
|
|
|
option(LAMMPS_EXCEPTIONS "enable the use of C++ exceptions for error messages (useful for library interface)" OFF)
|
|
if(LAMMPS_EXCEPTIONS)
|
|
add_definitions(-DLAMMPS_EXCEPTIONS)
|
|
set(LAMMPS_API_DEFINES "${LAMMPS_API_DEFINES} -DLAMMPS_EXCEPTIONS")
|
|
endif()
|
|
|
|
set(LAMMPS_MACHINE "" CACHE STRING "Suffix to append to lmp binary and liblammps (WON'T enable any features automatically")
|
|
mark_as_advanced(LAMMPS_MACHINE)
|
|
if(LAMMPS_MACHINE)
|
|
set(LAMMPS_MACHINE "_${LAMMPS_MACHINE}")
|
|
endif()
|
|
|
|
option(CMAKE_VERBOSE_MAKEFILE "Verbose makefile" OFF)
|
|
|
|
option(ENABLE_TESTING "Enable testing" OFF)
|
|
if(ENABLE_TESTING)
|
|
enable_testing()
|
|
endif(ENABLE_TESTING)
|
|
|
|
option(ENABLE_ALL "Build all default packages" OFF)
|
|
set(DEFAULT_PACKAGES ASPHERE BODY CLASS2 COLLOID COMPRESS CORESHELL DIPOLE GRANULAR
|
|
KSPACE MANYBODY MC MEAM MISC MOLECULE PERI QEQ
|
|
REAX REPLICA RIGID SHOCK SNAP SRD)
|
|
set(OTHER_PACKAGES KIM PYTHON MSCG MPIIO VORONOI POEMS LATTE
|
|
USER-ATC USER-AWPMD USER-BOCS USER-CGDNA USER-MESO
|
|
USER-CGSDK USER-COLVARS USER-DIFFRACTION USER-DPD USER-DRUDE USER-EFF
|
|
USER-FEP USER-H5MD USER-LB USER-MANIFOLD USER-MEAMC USER-MGPT USER-MISC
|
|
USER-MOFFF USER-MOLFILE USER-NETCDF USER-PHONON USER-QTB USER-REAXC USER-SMD
|
|
USER-SMTBQ USER-SPH USER-TALLY USER-UEF USER-VTK USER-QUIP USER-QMMM)
|
|
set(ACCEL_PACKAGES USER-OMP KOKKOS OPT USER-INTEL GPU)
|
|
foreach(PKG ${DEFAULT_PACKAGES})
|
|
option(PKG_${PKG} "Build ${PKG} Package" ${ENABLE_ALL})
|
|
endforeach()
|
|
foreach(PKG ${ACCEL_PACKAGES} ${OTHER_PACKAGES})
|
|
option(PKG_${PKG} "Build ${PKG} Package" OFF)
|
|
endforeach()
|
|
|
|
macro(pkg_depends PKG1 PKG2)
|
|
if(PKG_${PKG1} AND NOT (PKG_${PKG2} OR BUILD_${PKG2}))
|
|
message(FATAL_ERROR "${PKG1} package needs LAMMPS to be build with ${PKG2}")
|
|
endif()
|
|
endmacro()
|
|
|
|
pkg_depends(MPIIO MPI)
|
|
pkg_depends(QEQ MANYBODY)
|
|
pkg_depends(USER-ATC MANYBODY)
|
|
pkg_depends(USER-LB MPI)
|
|
pkg_depends(USER-MISC MANYBODY)
|
|
pkg_depends(USER-PHONON KSPACE)
|
|
pkg_depends(CORESHELL KSPACE)
|
|
|
|
######################################################
|
|
# packages with special compiler needs or external libs
|
|
######################################################
|
|
if(PKG_REAX OR PKG_MEAM OR PKG_USER-QUIP OR PKG_USER-QMMM OR PKG_LATTE)
|
|
enable_language(Fortran)
|
|
list(APPEND LAMMPS_LINK_LIBS ${CMAKE_Fortran_IMPLICIT_LINK_LIBRARIES})
|
|
endif()
|
|
|
|
if(PKG_MEAM OR PKG_USER-H5MD OR PKG_USER-QMMM)
|
|
enable_language(C)
|
|
endif()
|
|
|
|
if(PKG_MSCG)
|
|
if (CMAKE_VERSION VERSION_LESS "3.1")
|
|
message(FATAL_ERROR "For the MSCG package you need at least cmake-3.1")
|
|
endif()
|
|
# starting with CMake 3.1 this is all you have to do to enforce C++11
|
|
set(CMAKE_CXX_STANDARD 11) # C++11...
|
|
set(CMAKE_CXX_STANDARD_REQUIRED ON) #...is required...
|
|
set(CMAKE_CXX_EXTENSIONS OFF) #...without compiler extensions like gnu++11
|
|
endif()
|
|
|
|
find_package(OpenMP QUIET)
|
|
option(BUILD_OMP "Build with OpenMP support" ${OpenMP_FOUND})
|
|
if(BUILD_OMP OR PKG_USER-OMP OR PKG_KOKKOS OR PKG_USER-INTEL)
|
|
find_package(OpenMP REQUIRED)
|
|
set (CMAKE_C_FLAGS "${CMAKE_C_FLAGS} ${OpenMP_C_FLAGS}")
|
|
set (CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ${OpenMP_CXX_FLAGS}")
|
|
endif()
|
|
|
|
if(PKG_KSPACE)
|
|
option(FFT_SINGLE "Use single precision FFT instead of double" OFF)
|
|
set(FFTW "FFTW3")
|
|
if(FFT_SINGLE)
|
|
set(FFTW "FFTW3F")
|
|
add_definitions(-DFFT_SINGLE)
|
|
endif()
|
|
find_package(${FFTW} QUIET)
|
|
if(${FFTW}_FOUND)
|
|
set(FFT "${FFTW}" CACHE STRING "FFT library for KSPACE package")
|
|
else()
|
|
set(FFT "KISSFFT" CACHE STRING "FFT library for KSPACE package")
|
|
endif()
|
|
set_property(CACHE FFT PROPERTY STRINGS KISSFFT ${FFTW} MKL)
|
|
if(NOT FFT STREQUAL "KISSFFT")
|
|
find_package(${FFT} REQUIRED)
|
|
if(NOT FFT STREQUAL "FFTW3F")
|
|
add_definitions(-DFFT_FFTW)
|
|
else()
|
|
add_definitions(-DFFT_${FFT})
|
|
endif()
|
|
include_directories(${${FFT}_INCLUDE_DIRS})
|
|
list(APPEND LAMMPS_LINK_LIBS ${${FFT}_LIBRARIES})
|
|
endif()
|
|
set(PACK_OPTIMIZATION "PACK_ARRAY" CACHE STRING "Optimization for FFT")
|
|
set_property(CACHE PACK_OPTIMIZATION PROPERTY STRINGS PACK_ARRAY PACK_POINTER PACK_MEMCPY)
|
|
if(NOT PACK_OPTIMIZATION STREQUAL "PACK_ARRAY")
|
|
add_definitions(-D${PACK_OPTIMIZATION})
|
|
endif()
|
|
endif()
|
|
|
|
if(PKG_MSCG OR PKG_USER-ATC OR PKG_USER-AWPMD OR PKG_USER-QUIP OR PKG_LATTE)
|
|
find_package(LAPACK)
|
|
if(NOT LAPACK_FOUND)
|
|
enable_language(Fortran)
|
|
file(GLOB LAPACK_SOURCES ${LAMMPS_LIB_SOURCE_DIR}/linalg/*.f)
|
|
add_library(linalg STATIC ${LAPACK_SOURCES})
|
|
set(LAPACK_LIBRARIES linalg)
|
|
endif()
|
|
endif()
|
|
|
|
if(PKG_PYTHON)
|
|
find_package(PythonInterp REQUIRED)
|
|
find_package(PythonLibs REQUIRED)
|
|
add_definitions(-DLMP_PYTHON)
|
|
include_directories(${PYTHON_INCLUDE_DIR})
|
|
list(APPEND LAMMPS_LINK_LIBS ${PYTHON_LIBRARY})
|
|
if(BUILD_SHARED_LIBS)
|
|
if(NOT PYTHON_INSTDIR)
|
|
execute_process(COMMAND ${PYTHON_EXECUTABLE}
|
|
-c "import distutils.sysconfig as cg; print(cg.get_python_lib(1,0,prefix='${CMAKE_INSTALL_PREFIX}'))"
|
|
OUTPUT_VARIABLE PYTHON_INSTDIR OUTPUT_STRIP_TRAILING_WHITESPACE)
|
|
endif()
|
|
install(FILES ${CMAKE_CURRENT_SOURCE_DIR}/../python/lammps.py DESTINATION ${PYTHON_INSTDIR})
|
|
endif()
|
|
endif()
|
|
|
|
find_package(JPEG QUIET)
|
|
option(WITH_JPEG "Enable JPEG support" ${JPEG_FOUND})
|
|
if(WITH_JPEG)
|
|
find_package(JPEG REQUIRED)
|
|
add_definitions(-DLAMMPS_JPEG)
|
|
include_directories(${JPEG_INCLUDE_DIR})
|
|
list(APPEND LAMMPS_LINK_LIBS ${JPEG_LIBRARIES})
|
|
endif()
|
|
|
|
find_package(PNG QUIET)
|
|
find_package(ZLIB QUIET)
|
|
if(PNG_FOUND AND ZLIB_FOUND)
|
|
option(WITH_PNG "Enable PNG support" ON)
|
|
else()
|
|
option(WITH_PNG "Enable PNG support" OFF)
|
|
endif()
|
|
if(WITH_PNG)
|
|
find_package(PNG REQUIRED)
|
|
find_package(ZLIB REQUIRED)
|
|
include_directories(${PNG_INCLUDE_DIRS} ${ZLIB_INCLUDE_DIRS})
|
|
list(APPEND LAMMPS_LINK_LIBS ${PNG_LIBRARIES} ${ZLIB_LIBRARIES})
|
|
add_definitions(-DLAMMPS_PNG)
|
|
endif()
|
|
|
|
find_program(GZIP_EXECUTABLE gzip)
|
|
find_package_handle_standard_args(GZIP REQUIRED_VARS GZIP_EXECUTABLE)
|
|
option(WITH_GZIP "Enable GZIP support" ${GZIP_FOUND})
|
|
if(WITH_GZIP)
|
|
if(NOT GZIP_FOUND)
|
|
message(FATAL_ERROR "gzip executable not found")
|
|
endif()
|
|
add_definitions(-DLAMMPS_GZIP)
|
|
endif()
|
|
|
|
find_program(FFMPEG_EXECUTABLE ffmpeg)
|
|
find_package_handle_standard_args(FFMPEG REQUIRED_VARS FFMPEG_EXECUTABLE)
|
|
option(WITH_FFMPEG "Enable FFMPEG support" ${FFMPEG_FOUND})
|
|
if(WITH_FFMPEG)
|
|
if(NOT FFMPEG_FOUND)
|
|
message(FATAL_ERROR "ffmpeg executable not found")
|
|
endif()
|
|
add_definitions(-DLAMMPS_FFMPEG)
|
|
endif()
|
|
|
|
if(PKG_VORONOI)
|
|
option(DOWNLOAD_VORO "Download voro++ (instead of using the system's one)" OFF)
|
|
if(DOWNLOAD_VORO)
|
|
include(ExternalProject)
|
|
ExternalProject_Add(voro_build
|
|
URL http://math.lbl.gov/voro++/download/dir/voro++-0.4.6.tar.gz
|
|
URL_MD5 2338b824c3b7b25590e18e8df5d68af9
|
|
CONFIGURE_COMMAND "" BUILD_IN_SOURCE 1 INSTALL_COMMAND ""
|
|
)
|
|
ExternalProject_get_property(voro_build SOURCE_DIR)
|
|
set(VORO_LIBRARIES ${SOURCE_DIR}/src/libvoro++.a)
|
|
set(VORO_INCLUDE_DIRS ${SOURCE_DIR}/src)
|
|
list(APPEND LAMMPS_DEPS voro_build)
|
|
else()
|
|
find_package(VORO)
|
|
if(NOT VORO_FOUND)
|
|
message(FATAL_ERROR "VORO not found, help CMake to find it by setting VORO_LIBRARY and VORO_INCLUDE_DIR, or set DOWNLOAD_VORO=ON to download it")
|
|
endif()
|
|
endif()
|
|
include_directories(${VORO_INCLUDE_DIRS})
|
|
list(APPEND LAMMPS_LINK_LIBS ${VORO_LIBRARIES})
|
|
endif()
|
|
|
|
if(PKG_LATTE)
|
|
option(DOWNLOAD_LATTE "Download latte (instead of using the system's one)" OFF)
|
|
if(DOWNLOAD_LATTE)
|
|
message(STATUS "LATTE not found - we will build our own")
|
|
include(ExternalProject)
|
|
ExternalProject_Add(latte_build
|
|
URL https://github.com/lanl/LATTE/archive/v1.1.1.tar.gz
|
|
URL_MD5 cb86f1d2473ce00aa61ff6a023154b03
|
|
SOURCE_SUBDIR cmake
|
|
CMAKE_ARGS -DCMAKE_INSTALL_PREFIX=<INSTALL_DIR> -DCMAKE_POSITION_INDEPENDENT_CODE=${CMAKE_POSITION_INDEPENDENT_CODE}
|
|
)
|
|
ExternalProject_get_property(latte_build INSTALL_DIR)
|
|
set(LATTE_LIBRARIES ${INSTALL_DIR}/${CMAKE_INSTALL_LIBDIR}/liblatte.a)
|
|
list(APPEND LAMMPS_DEPS latte_build)
|
|
else()
|
|
find_package(LATTE)
|
|
if(NOT LATTE_FOUND)
|
|
message(FATAL_ERROR "LATTE not found, help CMake to find it by setting LATTE_LIBRARY, or set DOWNLOAD_LATTE=ON to download it")
|
|
endif()
|
|
endif()
|
|
list(APPEND LAMMPS_LINK_LIBS ${LATTE_LIBRARIES} ${LAPACK_LIBRARIES})
|
|
endif()
|
|
|
|
if(PKG_USER-MOLFILE)
|
|
add_library(molfile INTERFACE)
|
|
target_include_directories(molfile INTERFACE ${LAMMPS_LIB_SOURCE_DIR}/molfile)
|
|
target_link_libraries(molfile INTERFACE ${CMAKE_DL_LIBS})
|
|
list(APPEND LAMMPS_LINK_LIBS molfile)
|
|
endif()
|
|
|
|
if(PKG_USER-NETCDF)
|
|
find_package(NetCDF REQUIRED)
|
|
include_directories(NETCDF_INCLUDE_DIR)
|
|
list(APPEND LAMMPS_LINK_LIBS ${NETCDF_LIBRARY})
|
|
add_definitions(-DLMP_HAS_NETCDF -DNC_64BIT_DATA=0x0020)
|
|
endif()
|
|
|
|
if(PKG_USER-SMD)
|
|
option(DOWNLOAD_Eigen3 "Download Eigen3 (instead of using the system's one)" OFF)
|
|
if(DOWNLOAD_Eigen3)
|
|
include(ExternalProject)
|
|
ExternalProject_Add(Eigen3_build
|
|
URL http://bitbucket.org/eigen/eigen/get/3.3.4.tar.gz
|
|
URL_MD5 1a47e78efe365a97de0c022d127607c3
|
|
CMAKE_ARGS -DCMAKE_INSTALL_PREFIX=<INSTALL_DIR> -DEIGEN_TEST_NOQT=ON
|
|
-DCMAKE_DISABLE_FIND_PACKAGE_LAPACK=ON -DCMAKE_DISABLE_FIND_PACKAGE_Cholmod=ON -DCMAKE_DISABLE_FIND_PACKAGE_Umfpack=ON -DCMAKE_DISABLE_FIND_PACKAGE_SuperLU=ON
|
|
-DCMAKE_DISABLE_FIND_PACKAGE_PASTIX=ON -DCMAKE_DISABLE_FIND_PACKAGE_SPQR=ON -DCMAKE_DISABLE_FIND_PACKAGE_Boost=ON -DCMAKE_DISABLE_FIND_PACKAGE_CUDA=ON
|
|
-DCMAKE_DISABLE_FIND_PACKAGE_FFTW=ON -DCMAKE_DISABLE_FIND_PACKAGE_MPFR=ON -DCMAKE_DISABLE_FIND_PACKAGE_OpenGL=ON
|
|
)
|
|
ExternalProject_get_property(Eigen3_build INSTALL_DIR)
|
|
set(EIGEN3_INCLUDE_DIR ${INSTALL_DIR}/include/eigen3)
|
|
list(APPEND LAMMPS_DEPS Eigen3_build)
|
|
else()
|
|
find_package(Eigen3)
|
|
if(NOT Eigen3_FOUND)
|
|
message(FATAL_ERROR "Eigen3 not found, help CMake to find it by setting EIGEN3_INCLUDE_DIR, or set DOWNLOAD_Eigen3=ON to download it")
|
|
endif()
|
|
endif()
|
|
include_directories(${EIGEN3_INCLUDE_DIR})
|
|
endif()
|
|
|
|
if(PKG_USER-QUIP)
|
|
find_package(QUIP REQUIRED)
|
|
list(APPEND LAMMPS_LINK_LIBS ${QUIP_LIBRARIES} ${LAPACK_LIBRARIES})
|
|
endif()
|
|
|
|
if(PKG_USER-QMMM)
|
|
message(WARNING "Building QMMM with CMake is still experimental")
|
|
find_package(QE REQUIRED)
|
|
include_directories(${QE_INCLUDE_DIRS})
|
|
list(APPEND LAMMPS_LINK_LIBS ${QE_LIBRARIES})
|
|
endif()
|
|
|
|
if(PKG_USER-VTK)
|
|
find_package(VTK REQUIRED NO_MODULE)
|
|
include(${VTK_USE_FILE})
|
|
add_definitions(-DLAMMPS_VTK)
|
|
list(APPEND LAMMPS_LINK_LIBS ${VTK_LIBRARIES})
|
|
endif()
|
|
|
|
if(PKG_KIM)
|
|
option(DOWNLOAD_KIM "Download kim-api (instead of using the system's one)" OFF)
|
|
if(DOWNLOAD_KIM)
|
|
include(ExternalProject)
|
|
ExternalProject_Add(kim_build
|
|
URL https://github.com/openkim/kim-api/archive/v1.9.5.tar.gz
|
|
URL_MD5 9f66efc128da33039e30659f36fc6d00
|
|
BUILD_IN_SOURCE 1
|
|
CONFIGURE_COMMAND <SOURCE_DIR>/configure --prefix=<INSTALL_DIR>
|
|
)
|
|
ExternalProject_get_property(kim_build INSTALL_DIR)
|
|
set(KIM_INCLUDE_DIRS ${INSTALL_DIR}/include/kim-api-v1)
|
|
set(KIM_LIBRARIES ${INSTALL_DIR}/lib/libkim-api-v1.so)
|
|
list(APPEND LAMMPS_DEPS kim_build)
|
|
else()
|
|
find_package(KIM)
|
|
if(NOT KIM_FOUND)
|
|
message(FATAL_ERROR "KIM not found, help CMake to find it by setting KIM_LIBRARY and KIM_INCLUDE_DIR, or set DOWNLOAD_KIM=ON to download it")
|
|
endif()
|
|
endif()
|
|
list(APPEND LAMMPS_LINK_LIBS ${KIM_LIBRARIES})
|
|
include_directories(${KIM_INCLUDE_DIRS})
|
|
endif()
|
|
|
|
if(PKG_MSCG)
|
|
find_package(GSL REQUIRED)
|
|
set(LAMMPS_LIB_MSCG_BIN_DIR ${LAMMPS_LIB_BINARY_DIR}/mscg)
|
|
set(MSCG_TARBALL ${LAMMPS_LIB_MSCG_BIN_DIR}/MS-CG-master.zip)
|
|
set(LAMMPS_LIB_MSCG_BIN_DIR ${LAMMPS_LIB_MSCG_BIN_DIR}/MSCG-release-master/src)
|
|
if(NOT EXISTS ${LAMMPS_LIB_MSCG_BIN_DIR})
|
|
if(NOT EXISTS ${MSCG_TARBALL})
|
|
message(STATUS "Downloading ${MSCG_TARBALL}")
|
|
file(DOWNLOAD
|
|
https://github.com/uchicago-voth/MSCG-release/archive/master.zip
|
|
${MSCG_TARBALL} SHOW_PROGRESS) #EXPECTED_MD5 cannot be due due to master
|
|
endif()
|
|
message(STATUS "Unpacking ${MSCG_TARBALL}")
|
|
execute_process(COMMAND ${CMAKE_COMMAND} -E tar xvf ${MSCG_TARBALL}
|
|
WORKING_DIRECTORY ${LAMMPS_LIB_BINARY_DIR}/mscg)
|
|
endif()
|
|
file(GLOB MSCG_SOURCES ${LAMMPS_LIB_MSCG_BIN_DIR}/*.cpp)
|
|
add_library(mscg STATIC ${MSCG_SOURCES})
|
|
list(APPEND LAMMPS_LINK_LIBS mscg)
|
|
target_compile_options(mscg PRIVATE -DDIMENSION=3 -D_exclude_gromacs=1)
|
|
target_include_directories(mscg PUBLIC ${LAMMPS_LIB_MSCG_BIN_DIR})
|
|
target_link_libraries(mscg ${GSL_LIBRARIES} ${LAPACK_LIBRARIES})
|
|
endif()
|
|
|
|
if(PKG_COMPRESS)
|
|
find_package(ZLIB REQUIRED)
|
|
include_directories(${ZLIB_INCLUDE_DIRS})
|
|
list(APPEND LAMMPS_LINK_LIBS ${ZLIB_LIBRARIES})
|
|
endif()
|
|
|
|
########################################################################
|
|
# Basic system tests (standard libraries, headers, functions, types) #
|
|
########################################################################
|
|
include(CheckIncludeFileCXX)
|
|
foreach(HEADER math.h)
|
|
check_include_file_cxx(${HEADER} FOUND_${HEADER})
|
|
if(NOT FOUND_${HEADER})
|
|
message(FATAL_ERROR "Could not find needed header - ${HEADER}")
|
|
endif(NOT FOUND_${HEADER})
|
|
endforeach(HEADER)
|
|
|
|
set(MATH_LIBRARIES "m" CACHE STRING "math library")
|
|
mark_as_advanced( MATH_LIBRARIES )
|
|
include(CheckLibraryExists)
|
|
foreach(FUNC sin cos)
|
|
check_library_exists(${MATH_LIBRARIES} ${FUNC} "" FOUND_${FUNC}_${MATH_LIBRARIES})
|
|
if(NOT FOUND_${FUNC}_${MATH_LIBRARIES})
|
|
message(FATAL_ERROR "Could not find needed math function - ${FUNC}")
|
|
endif(NOT FOUND_${FUNC}_${MATH_LIBRARIES})
|
|
endforeach(FUNC)
|
|
list(APPEND LAMMPS_LINK_LIBS ${MATH_LIBRARIES})
|
|
|
|
######################################
|
|
# Generate Basic Style files
|
|
######################################
|
|
include(StyleHeaderUtils)
|
|
RegisterStyles(${LAMMPS_SOURCE_DIR})
|
|
|
|
##############################################
|
|
# add sources of enabled packages
|
|
############################################
|
|
foreach(PKG ${DEFAULT_PACKAGES} ${OTHER_PACKAGES})
|
|
set(${PKG}_SOURCES_DIR ${LAMMPS_SOURCE_DIR}/${PKG})
|
|
|
|
# ignore PKG files which were manually installed in src folder
|
|
# headers are ignored during RegisterStyles
|
|
file(GLOB ${PKG}_SOURCES ${${PKG}_SOURCES_DIR}/*.cpp)
|
|
file(GLOB ${PKG}_HEADERS ${${PKG}_SOURCES_DIR}/*.h)
|
|
|
|
foreach(PKG_FILE in ${${PKG}_SOURCES})
|
|
get_filename_component(FNAME ${PKG_FILE} NAME)
|
|
list(REMOVE_ITEM LIB_SOURCES ${LAMMPS_SOURCE_DIR}/${FNAME})
|
|
endforeach()
|
|
|
|
foreach(PKG_FILE in ${${PKG}_HEADERS})
|
|
get_filename_component(FNAME ${PKG_FILE} NAME)
|
|
DetectAndRemovePackageHeader(${LAMMPS_SOURCE_DIR}/${FNAME})
|
|
endforeach()
|
|
|
|
if(PKG_${PKG})
|
|
# detects styles in package and adds them to global list
|
|
RegisterStyles(${${PKG}_SOURCES_DIR})
|
|
|
|
list(APPEND LIB_SOURCES ${${PKG}_SOURCES})
|
|
include_directories(${${PKG}_SOURCES_DIR})
|
|
endif()
|
|
endforeach()
|
|
|
|
##############################################
|
|
# add lib sources of (simple) enabled packages
|
|
############################################
|
|
foreach(SIMPLE_LIB REAX MEAM POEMS USER-ATC USER-AWPMD USER-COLVARS USER-H5MD
|
|
USER-QMMM)
|
|
if(PKG_${SIMPLE_LIB})
|
|
string(REGEX REPLACE "^USER-" "" PKG_LIB "${SIMPLE_LIB}")
|
|
string(TOLOWER "${PKG_LIB}" PKG_LIB)
|
|
file(GLOB_RECURSE ${PKG_LIB}_SOURCES ${LAMMPS_LIB_SOURCE_DIR}/${PKG_LIB}/*.F
|
|
${LAMMPS_LIB_SOURCE_DIR}/${PKG_LIB}/*.c ${LAMMPS_LIB_SOURCE_DIR}/${PKG_LIB}/*.cpp)
|
|
add_library(${PKG_LIB} STATIC ${${PKG_LIB}_SOURCES})
|
|
list(APPEND LAMMPS_LINK_LIBS ${PKG_LIB})
|
|
if(PKG_LIB STREQUAL awpmd)
|
|
target_include_directories(awpmd PUBLIC ${LAMMPS_LIB_SOURCE_DIR}/awpmd/systems/interact ${LAMMPS_LIB_SOURCE_DIR}/awpmd/ivutils/include)
|
|
elseif(PKG_LIB STREQUAL h5md)
|
|
target_include_directories(h5md PUBLIC ${LAMMPS_LIB_SOURCE_DIR}/h5md/include)
|
|
elseif(PKG_LIB STREQUAL colvars)
|
|
target_compile_options(colvars PRIVATE -DLEPTON)
|
|
target_include_directories(colvars PRIVATE ${LAMMPS_LIB_SOURCE_DIR}/colvars/lepton/include)
|
|
target_include_directories(colvars PUBLIC ${LAMMPS_LIB_SOURCE_DIR}/colvars)
|
|
else()
|
|
target_include_directories(${PKG_LIB} PUBLIC ${LAMMPS_LIB_SOURCE_DIR}/${PKG_LIB})
|
|
endif()
|
|
endif()
|
|
endforeach()
|
|
|
|
if(PKG_USER-AWPMD)
|
|
target_link_libraries(awpmd ${LAPACK_LIBRARIES})
|
|
endif()
|
|
|
|
if(PKG_USER-ATC)
|
|
target_link_libraries(atc ${LAPACK_LIBRARIES})
|
|
endif()
|
|
|
|
if(PKG_USER-H5MD)
|
|
find_package(HDF5 REQUIRED)
|
|
target_link_libraries(h5md ${HDF5_LIBRARIES})
|
|
target_include_directories(h5md PRIVATE ${HDF5_INCLUDE_DIRS})
|
|
endif()
|
|
|
|
|
|
######################################################################
|
|
# packages which selectively include variants based on enabled styles
|
|
# e.g. accelerator packages
|
|
######################################################################
|
|
if(PKG_USER-OMP)
|
|
set(USER-OMP_SOURCES_DIR ${LAMMPS_SOURCE_DIR}/USER-OMP)
|
|
set(USER-OMP_SOURCES ${USER-OMP_SOURCES_DIR}/thr_data.cpp
|
|
${USER-OMP_SOURCES_DIR}/thr_omp.cpp
|
|
${USER-OMP_SOURCES_DIR}/fix_nh_omp.cpp
|
|
${USER-OMP_SOURCES_DIR}/fix_nh_sphere_omp.cpp)
|
|
set_property(GLOBAL PROPERTY "OMP_SOURCES" "${USER-OMP_SOURCES}")
|
|
|
|
# detects styles which have USER-OMP version
|
|
RegisterStylesExt(${USER-OMP_SOURCES_DIR} omp OMP_SOURCES)
|
|
|
|
get_property(USER-OMP_SOURCES GLOBAL PROPERTY OMP_SOURCES)
|
|
|
|
list(APPEND LIB_SOURCES ${USER-OMP_SOURCES})
|
|
include_directories(${USER-OMP_SOURCES_DIR})
|
|
endif()
|
|
|
|
if(PKG_KOKKOS)
|
|
set(LAMMPS_LIB_KOKKOS_SRC_DIR ${LAMMPS_LIB_SOURCE_DIR}/kokkos)
|
|
set(LAMMPS_LIB_KOKKOS_BIN_DIR ${LAMMPS_LIB_BINARY_DIR}/kokkos)
|
|
add_definitions(-DLMP_KOKKOS)
|
|
add_subdirectory(${LAMMPS_LIB_KOKKOS_SRC_DIR} ${LAMMPS_LIB_KOKKOS_BIN_DIR})
|
|
|
|
set(Kokkos_INCLUDE_DIRS ${LAMMPS_LIB_KOKKOS_SRC_DIR}/core/src
|
|
${LAMMPS_LIB_KOKKOS_SRC_DIR}/containers/src
|
|
${LAMMPS_LIB_KOKKOS_SRC_DIR}/algorithms/src
|
|
${LAMMPS_LIB_KOKKOS_BIN_DIR})
|
|
include_directories(${Kokkos_INCLUDE_DIRS})
|
|
list(APPEND LAMMPS_LINK_LIBS kokkos)
|
|
|
|
set(KOKKOS_PKG_SOURCES_DIR ${LAMMPS_SOURCE_DIR}/KOKKOS)
|
|
set(KOKKOS_PKG_SOURCES ${KOKKOS_PKG_SOURCES_DIR}/kokkos.cpp
|
|
${KOKKOS_PKG_SOURCES_DIR}/atom_kokkos.cpp
|
|
${KOKKOS_PKG_SOURCES_DIR}/atom_vec_kokkos.cpp
|
|
${KOKKOS_PKG_SOURCES_DIR}/comm_kokkos.cpp
|
|
${KOKKOS_PKG_SOURCES_DIR}/comm_tiled_kokkos.cpp
|
|
${KOKKOS_PKG_SOURCES_DIR}/neighbor_kokkos.cpp
|
|
${KOKKOS_PKG_SOURCES_DIR}/neigh_list_kokkos.cpp
|
|
${KOKKOS_PKG_SOURCES_DIR}/neigh_bond_kokkos.cpp
|
|
${KOKKOS_PKG_SOURCES_DIR}/fix_nh_kokkos.cpp
|
|
${KOKKOS_PKG_SOURCES_DIR}/nbin_kokkos.cpp
|
|
${KOKKOS_PKG_SOURCES_DIR}/npair_kokkos.cpp
|
|
${KOKKOS_PKG_SOURCES_DIR}/domain_kokkos.cpp
|
|
${KOKKOS_PKG_SOURCES_DIR}/modify_kokkos.cpp)
|
|
set_property(GLOBAL PROPERTY "KOKKOS_PKG_SOURCES" "${KOKKOS_PKG_SOURCES}")
|
|
|
|
# detects styles which have KOKKOS version
|
|
RegisterStylesExt(${KOKKOS_PKG_SOURCES_DIR} kokkos KOKKOS_PKG_SOURCES)
|
|
|
|
# register kokkos-only styles
|
|
RegisterNBinStyle(${KOKKOS_PKG_SOURCES_DIR}/nbin_kokkos.h)
|
|
RegisterNPairStyle(${KOKKOS_PKG_SOURCES_DIR}/npair_kokkos.h)
|
|
|
|
if(PKG_USER-DPD)
|
|
get_property(KOKKOS_PKG_SOURCES GLOBAL PROPERTY KOKKOS_PKG_SOURCES)
|
|
list(APPEND KOKKOS_PKG_SOURCES ${KOKKOS_PKG_SOURCES_DIR}/npair_ssa_kokkos.cpp)
|
|
RegisterNPairStyle(${KOKKOS_PKG_SOURCES_DIR}/npair_ssa_kokkos.h)
|
|
set_property(GLOBAL PROPERTY "KOKKOS_PKG_SOURCES" "${KOKKOS_PKG_SOURCES}")
|
|
endif()
|
|
|
|
get_property(KOKKOS_PKG_SOURCES GLOBAL PROPERTY KOKKOS_PKG_SOURCES)
|
|
|
|
list(APPEND LIB_SOURCES ${KOKKOS_PKG_SOURCES})
|
|
include_directories(${KOKKOS_PKG_SOURCES_DIR})
|
|
endif()
|
|
|
|
if(PKG_OPT)
|
|
set(OPT_SOURCES_DIR ${LAMMPS_SOURCE_DIR}/OPT)
|
|
set(OPT_SOURCES)
|
|
set_property(GLOBAL PROPERTY "OPT_SOURCES" "${OPT_SOURCES}")
|
|
|
|
# detects styles which have OPT version
|
|
RegisterStylesExt(${OPT_SOURCES_DIR} opt OPT_SOURCES)
|
|
|
|
get_property(OPT_SOURCES GLOBAL PROPERTY OPT_SOURCES)
|
|
|
|
list(APPEND LIB_SOURCES ${OPT_SOURCES})
|
|
include_directories(${OPT_SOURCES_DIR})
|
|
endif()
|
|
|
|
if(PKG_USER-INTEL)
|
|
if(NOT DEVELOPER_MODE)
|
|
if(NOT CMAKE_CXX_COMPILER_ID STREQUAL "Intel")
|
|
message(FATAL_ERROR "USER-INTEL is only useful together with intel compiler")
|
|
endif()
|
|
if(CMAKE_CXX_COMPILER_VERSION VERSION_LESS 16)
|
|
message(FATAL_ERROR "USER-INTEL is needed at least 2016 intel compiler, found ${CMAKE_CXX_COMPILER_VERSION}")
|
|
endif()
|
|
endif()
|
|
option(INJECT_INTEL_FLAG "Inject OMG fast flags for USER-INTEL" ON)
|
|
if(INJECT_INTEL_FLAG AND CMAKE_CXX_COMPILER_ID STREQUAL "Intel")
|
|
if(CMAKE_CXX_COMPILER_VERSION VERSION_EQUAL 17.3 OR CMAKE_CXX_COMPILER_VERSION VERSION_EQUAL 17.4)
|
|
set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -xCOMMON-AVX512")
|
|
else()
|
|
set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -xHost")
|
|
endif()
|
|
include(CheckCXXCompilerFlag)
|
|
foreach(_FLAG -qopenmp -qno-offload -fno-alias -ansi-alias -restrict -DLMP_INTEL_USELRT -DLMP_USE_MKL_RNG -O2 "-fp-model fast=2" -no-prec-div -qoverride-limits -qopt-zmm-usage=high)
|
|
check_cxx_compiler_flag("${__FLAG}" COMPILER_SUPPORTS${_FLAG})
|
|
if(COMPILER_SUPPORTS${_FLAG})
|
|
set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ${_FLAG}")
|
|
endif()
|
|
endforeach()
|
|
endif()
|
|
set(USER-INTEL_SOURCES_DIR ${LAMMPS_SOURCE_DIR}/USER-INTEL)
|
|
set(USER-INTEL_SOURCES ${USER-INTEL_SOURCES_DIR}/intel_preprocess.h
|
|
${USER-INTEL_SOURCES_DIR}/intel_buffers.h
|
|
${USER-INTEL_SOURCES_DIR}/intel_buffers.cpp
|
|
${USER-INTEL_SOURCES_DIR}/math_extra_intel.h
|
|
${USER-INTEL_SOURCES_DIR}/nbin_intel.h
|
|
${USER-INTEL_SOURCES_DIR}/nbin_intel.cpp
|
|
${USER-INTEL_SOURCES_DIR}/npair_intel.h
|
|
${USER-INTEL_SOURCES_DIR}/npair_intel.cpp
|
|
${USER-INTEL_SOURCES_DIR}/intel_simd.h
|
|
${USER-INTEL_SOURCES_DIR}/intel_intrinsics.h)
|
|
|
|
set_property(GLOBAL PROPERTY "USER-INTEL_SOURCES" "${USER-INTEL_SOURCES}")
|
|
|
|
# detects styles which have USER-INTEL version
|
|
RegisterStylesExt(${USER-INTEL_SOURCES_DIR} opt USER-INTEL_SOURCES)
|
|
|
|
get_property(USER-INTEL_SOURCES GLOBAL PROPERTY USER-INTEL_SOURCES)
|
|
|
|
list(APPEND LIB_SOURCES ${USER-INTEL_SOURCES})
|
|
include_directories(${USER-INTEL_SOURCES_DIR})
|
|
endif()
|
|
|
|
if(PKG_GPU)
|
|
if (CMAKE_VERSION VERSION_LESS "3.1")
|
|
message(FATAL_ERROR "For the GPU package you need at least cmake-3.1")
|
|
endif()
|
|
set(GPU_SOURCES_DIR ${LAMMPS_SOURCE_DIR}/GPU)
|
|
set(GPU_SOURCES ${GPU_SOURCES_DIR}/gpu_extra.h
|
|
${GPU_SOURCES_DIR}/fix_gpu.h
|
|
${GPU_SOURCES_DIR}/fix_gpu.cpp)
|
|
|
|
set(GPU_API "OpenCL" CACHE STRING "API used by GPU package")
|
|
set_property(CACHE GPU_API PROPERTY STRINGS OpenCL CUDA)
|
|
|
|
set(GPU_PREC "SINGLE_DOUBLE" CACHE STRING "LAMMPS GPU precision size")
|
|
set_property(CACHE GPU_PREC PROPERTY STRINGS SINGLE_DOUBLE SINGLE_SINGLE DOUBLE_DOUBLE)
|
|
|
|
file(GLOB GPU_LIB_SOURCES ${LAMMPS_LIB_SOURCE_DIR}/gpu/*.cpp)
|
|
file(MAKE_DIRECTORY ${LAMMPS_LIB_BINARY_DIR}/gpu)
|
|
|
|
if(GPU_API STREQUAL "CUDA")
|
|
find_package(CUDA REQUIRED)
|
|
find_program(BIN2C bin2c)
|
|
if(NOT BIN2C)
|
|
message(FATAL_ERROR "Couldn't find bin2c, use -DBIN2C helping cmake to find it.")
|
|
endif()
|
|
option(CUDPP_OPT "Enable CUDPP_OPT" ON)
|
|
|
|
set(GPU_ARCH "sm_30" CACHE STRING "LAMMPS GPU CUDA SM architecture")
|
|
set_property(CACHE GPU_ARCH PROPERTY STRINGS sm_10 sm_20 sm_30 sm_60)
|
|
|
|
file(GLOB GPU_LIB_CU ${LAMMPS_LIB_SOURCE_DIR}/gpu/*.cu ${CMAKE_CURRENT_SOURCE_DIR}/gpu/*.cu)
|
|
list(REMOVE_ITEM GPU_LIB_CU ${LAMMPS_LIB_SOURCE_DIR}/gpu/lal_pppm.cu)
|
|
|
|
cuda_include_directories(${LAMMPS_LIB_SOURCE_DIR}/gpu ${LAMMPS_LIB_BINARY_DIR}/gpu)
|
|
|
|
if(CUDPP_OPT)
|
|
cuda_include_directories(${LAMMPS_LIB_SOURCE_DIR}/gpu/cudpp_mini)
|
|
file(GLOB GPU_LIB_CUDPP_SOURCES ${LAMMPS_LIB_SOURCE_DIR}/gpu/cudpp_mini/*.cpp)
|
|
file(GLOB GPU_LIB_CUDPP_CU ${LAMMPS_LIB_SOURCE_DIR}/gpu/cudpp_mini/*.cu)
|
|
endif()
|
|
|
|
cuda_compile_cubin(GPU_GEN_OBJS ${GPU_LIB_CU} OPTIONS
|
|
-DUNIX -O3 -Xptxas -v --use_fast_math -DNV_KERNEL -DUCL_CUDADR -arch=${GPU_ARCH} -D_${GPU_PREC})
|
|
|
|
cuda_compile(GPU_OBJS ${GPU_LIB_CUDPP_CU} OPTIONS $<$<BOOL:${BUILD_SHARED_LIBS}>:-Xcompiler=-fPIC>
|
|
-DUNIX -O3 -Xptxas -v --use_fast_math -DUCL_CUDADR -arch=${GPU_ARCH} -D_${GPU_PREC})
|
|
|
|
foreach(CU_OBJ ${GPU_GEN_OBJS})
|
|
get_filename_component(CU_NAME ${CU_OBJ} NAME_WE)
|
|
string(REGEX REPLACE "^.*_lal_" "" CU_NAME "${CU_NAME}")
|
|
add_custom_command(OUTPUT ${LAMMPS_LIB_BINARY_DIR}/gpu/${CU_NAME}_cubin.h
|
|
COMMAND ${BIN2C} -c -n ${CU_NAME} ${CU_OBJ} > ${LAMMPS_LIB_BINARY_DIR}/gpu/${CU_NAME}_cubin.h
|
|
DEPENDS ${CU_OBJ}
|
|
COMMENT "Generating ${CU_NAME}_cubin.h")
|
|
list(APPEND GPU_LIB_SOURCES ${LAMMPS_LIB_BINARY_DIR}/gpu/${CU_NAME}_cubin.h)
|
|
endforeach()
|
|
set_directory_properties(PROPERTIES ADDITIONAL_MAKE_CLEAN_FILES "${LAMMPS_LIB_BINARY_DIR}/gpu/*_cubin.h")
|
|
|
|
|
|
add_library(gpu STATIC ${GPU_LIB_SOURCES} ${GPU_LIB_CUDPP_SOURCES} ${GPU_OBJS})
|
|
target_link_libraries(gpu ${CUDA_LIBRARIES} ${CUDA_CUDA_LIBRARY})
|
|
target_include_directories(gpu PRIVATE ${LAMMPS_LIB_BINARY_DIR}/gpu ${CUDA_INCLUDE_DIRS})
|
|
target_compile_definitions(gpu PRIVATE -D_${GPU_PREC} -DMPI_GERYON -DUCL_NO_EXIT)
|
|
if(CUDPP_OPT)
|
|
target_include_directories(gpu PRIVATE ${LAMMPS_LIB_SOURCE_DIR}/gpu/cudpp_mini)
|
|
target_compile_definitions(gpu PRIVATE -DUSE_CUDPP)
|
|
endif()
|
|
|
|
list(APPEND LAMMPS_LINK_LIBS gpu)
|
|
|
|
add_executable(nvc_get_devices ${LAMMPS_LIB_SOURCE_DIR}/gpu/geryon/ucl_get_devices.cpp)
|
|
target_compile_definitions(nvc_get_devices PRIVATE -DUCL_CUDADR)
|
|
target_link_libraries(nvc_get_devices PRIVATE ${CUDA_LIBRARIES} ${CUDA_CUDA_LIBRARY})
|
|
target_include_directories(nvc_get_devices PRIVATE ${CUDA_INCLUDE_DIRS})
|
|
|
|
|
|
elseif(GPU_API STREQUAL "OpenCL")
|
|
find_package(OpenCL REQUIRED)
|
|
set(OCL_TUNE "GENERIC" CACHE STRING "OpenCL Device Tuning")
|
|
set_property(CACHE OCL_TUNE PROPERTY STRINGS INTEL FERMI KEPLER CYPRESS GENERIC)
|
|
|
|
include(OpenCLUtils)
|
|
set(OCL_COMMON_HEADERS ${LAMMPS_LIB_SOURCE_DIR}/gpu/lal_preprocessor.h ${LAMMPS_LIB_SOURCE_DIR}/gpu/lal_aux_fun1.h)
|
|
|
|
file(GLOB GPU_LIB_CU ${LAMMPS_LIB_SOURCE_DIR}/gpu/*.cu)
|
|
list(REMOVE_ITEM GPU_LIB_CU ${LAMMPS_LIB_SOURCE_DIR}/gpu/lal_gayberne.cu ${LAMMPS_LIB_SOURCE_DIR}/gpu/lal_gayberne_lj.cu)
|
|
|
|
foreach(GPU_KERNEL ${GPU_LIB_CU})
|
|
get_filename_component(basename ${GPU_KERNEL} NAME_WE)
|
|
string(SUBSTRING ${basename} 4 -1 KERNEL_NAME)
|
|
GenerateOpenCLHeader(${KERNEL_NAME} ${CMAKE_CURRENT_BINARY_DIR}/gpu/${KERNEL_NAME}_cl.h ${OCL_COMMON_HEADERS} ${GPU_KERNEL})
|
|
list(APPEND GPU_LIB_SOURCES ${CMAKE_CURRENT_BINARY_DIR}/gpu/${KERNEL_NAME}_cl.h)
|
|
endforeach()
|
|
|
|
GenerateOpenCLHeader(gayberne ${CMAKE_CURRENT_BINARY_DIR}/gpu/gayberne_cl.h ${OCL_COMMON_HEADERS} ${LAMMPS_LIB_SOURCE_DIR}/gpu/lal_ellipsoid_extra.h ${LAMMPS_LIB_SOURCE_DIR}/gpu/lal_gayberne.cu)
|
|
GenerateOpenCLHeader(gayberne_lj ${CMAKE_CURRENT_BINARY_DIR}/gpu/gayberne_lj_cl.h ${OCL_COMMON_HEADERS} ${LAMMPS_LIB_SOURCE_DIR}/gpu/lal_ellipsoid_extra.h ${LAMMPS_LIB_SOURCE_DIR}/gpu/lal_gayberne_lj.cu)
|
|
list(APPEND GPU_LIB_SOURCES ${CMAKE_CURRENT_BINARY_DIR}/gpu/gayberne_cl.h ${CMAKE_CURRENT_BINARY_DIR}/gpu/gayberne_lj_cl.h)
|
|
|
|
add_library(gpu STATIC ${GPU_LIB_SOURCES})
|
|
target_link_libraries(gpu ${OpenCL_LIBRARIES})
|
|
target_include_directories(gpu PRIVATE ${CMAKE_CURRENT_BINARY_DIR}/gpu ${OpenCL_INCLUDE_DIRS})
|
|
target_compile_definitions(gpu PRIVATE -D_${GPU_PREC} -DMPI_GERYON -DUCL_NO_EXIT)
|
|
target_compile_definitions(gpu PRIVATE -DUSE_OPENCL)
|
|
|
|
list(APPEND LAMMPS_LINK_LIBS gpu)
|
|
|
|
add_executable(ocl_get_devices ${LAMMPS_LIB_SOURCE_DIR}/gpu/geryon/ucl_get_devices.cpp)
|
|
target_compile_definitions(ocl_get_devices PRIVATE -DUCL_OPENCL)
|
|
target_link_libraries(ocl_get_devices PRIVATE ${OpenCL_LIBRARIES})
|
|
target_include_directories(ocl_get_devices PRIVATE ${OpenCL_INCLUDE_DIRS})
|
|
endif()
|
|
|
|
# GPU package
|
|
FindStyleHeaders(${GPU_SOURCES_DIR} FIX_CLASS fix_ FIX)
|
|
|
|
set_property(GLOBAL PROPERTY "GPU_SOURCES" "${GPU_SOURCES}")
|
|
|
|
# detects styles which have GPU version
|
|
RegisterStylesExt(${GPU_SOURCES_DIR} gpu GPU_SOURCES)
|
|
|
|
get_property(GPU_SOURCES GLOBAL PROPERTY GPU_SOURCES)
|
|
|
|
list(APPEND LIB_SOURCES ${GPU_SOURCES})
|
|
include_directories(${GPU_SOURCES_DIR})
|
|
endif()
|
|
|
|
######################################################
|
|
# Generate style headers based on global list of
|
|
# styles registered during package selection
|
|
######################################################
|
|
set(LAMMPS_STYLE_HEADERS_DIR ${CMAKE_CURRENT_BINARY_DIR}/styles)
|
|
|
|
GenerateStyleHeaders(${LAMMPS_STYLE_HEADERS_DIR})
|
|
|
|
include_directories(${LAMMPS_SOURCE_DIR})
|
|
include_directories(${LAMMPS_STYLE_HEADERS_DIR})
|
|
|
|
###########################################
|
|
# Actually add executable and lib to build
|
|
############################################
|
|
add_library(lammps ${LIB_SOURCES})
|
|
list(REMOVE_DUPLICATES LAMMPS_LINK_LIBS)
|
|
target_link_libraries(lammps ${LAMMPS_LINK_LIBS})
|
|
if(LAMMPS_DEPS)
|
|
add_dependencies(lammps ${LAMMPS_DEPS})
|
|
endif()
|
|
set_target_properties(lammps PROPERTIES OUTPUT_NAME lammps${LAMMPS_MACHINE})
|
|
if(BUILD_SHARED_LIBS)
|
|
set_target_properties(lammps PROPERTIES SOVERSION ${SOVERSION})
|
|
install(TARGETS lammps LIBRARY DESTINATION ${CMAKE_INSTALL_LIBDIR} ARCHIVE DESTINATION ${CMAKE_INSTALL_LIBDIR})
|
|
install(FILES ${LAMMPS_SOURCE_DIR}/library.h DESTINATION ${CMAKE_INSTALL_INCLUDEDIR}/lammps)
|
|
configure_file(pkgconfig/liblammps.pc.in ${CMAKE_CURRENT_BINARY_DIR}/liblammps${LAMMPS_MACHINE}.pc @ONLY)
|
|
install(FILES ${CMAKE_CURRENT_BINARY_DIR}/liblammps${LAMMPS_MACHINE}.pc DESTINATION ${CMAKE_INSTALL_LIBDIR}/pkgconfig)
|
|
endif()
|
|
|
|
add_executable(lmp ${LMP_SOURCES})
|
|
target_link_libraries(lmp lammps)
|
|
set_target_properties(lmp PROPERTIES OUTPUT_NAME lmp${LAMMPS_MACHINE})
|
|
install(TARGETS lmp DESTINATION ${CMAKE_INSTALL_BINDIR})
|
|
if(ENABLE_TESTING)
|
|
add_test(ShowHelp lmp${LAMMPS_MACHINE} -help)
|
|
endif()
|
|
|
|
##################################
|
|
# Print package summary
|
|
##################################
|
|
foreach(PKG ${DEFAULT_PACKAGES} ${OTHER_PACKAGES} ${ACCEL_PACKAGES})
|
|
if(PKG_${PKG})
|
|
message(STATUS "Building package: ${PKG}")
|
|
endif()
|
|
endforeach()
|
|
|
|
string(TOUPPER "${CMAKE_BUILD_TYPE}" BTYPE)
|
|
get_directory_property(CPPFLAGS DIRECTORY ${CMAKE_SOURCE_DIR} COMPILE_DEFINITIONS)
|
|
include(FeatureSummary)
|
|
feature_summary(INCLUDE_QUIET_PACKAGES WHAT ALL)
|
|
message(STATUS "<<< Build configuration >>>
|
|
Build type ${CMAKE_BUILD_TYPE}
|
|
Install path ${CMAKE_INSTALL_PREFIX}
|
|
Compilers and Flags:
|
|
C++ Compiler ${CMAKE_CXX_COMPILER}
|
|
Type ${CMAKE_CXX_COMPILER_ID}
|
|
Version ${CMAKE_CXX_COMPILER_VERSION}
|
|
C++ Flags ${CMAKE_CXX_FLAGS} ${CMAKE_CXX_FLAGS_${BTYPE}}
|
|
Defines ${CPPFLAGS}")
|
|
get_property(LANGUAGES GLOBAL PROPERTY ENABLED_LANGUAGES)
|
|
list (FIND LANGUAGES "Fortran" _index)
|
|
if (${_index} GREATER -1)
|
|
message(STATUS "Fortran Compiler ${CMAKE_Fortran_COMPILER}
|
|
Type ${CMAKE_Fortran_COMPILER_ID}
|
|
Version ${CMAKE_Fortran_COMPILER_VERSION}
|
|
Fortran Flags ${CMAKE_Fortran_FLAGS} ${CMAKE_Fortran_FLAGS_${BTYPE}}")
|
|
endif()
|
|
list (FIND LANGUAGES "C" _index)
|
|
if (${_index} GREATER -1)
|
|
message(STATUS "C Compiler ${CMAKE_C_COMPILER}
|
|
Type ${CMAKE_C_COMPILER_ID}
|
|
Version ${CMAKE_C_COMPILER_VERSION}
|
|
C Flags ${CMAKE_C_FLAGS} ${CMAKE_C_FLAGS_${BTYPE}}")
|
|
endif()
|
|
if(CMAKE_EXE_LINKER_FLAGS)
|
|
message(STATUS "Linker flags:
|
|
Executable ${CMAKE_EXE_LINKER_FLAGS}")
|
|
endif()
|
|
if(BUILD_SHARED_LIBS)
|
|
message(STATUS "Shared libraries ${CMAKE_SHARED_LINKER_FLAGS}")
|
|
else()
|
|
message(STATUS "Static libraries ${CMAKE_STATIC_LINKER_FLAGS}")
|
|
endif()
|
|
message(STATUS "Link libraries: ${LAMMPS_LINK_LIBS}")
|
|
if(BUILD_MPI)
|
|
message(STATUS "Using mpi with headers in ${MPI_CXX_INCLUDE_PATH} and ${MPI_CXX_LIBRARIES}")
|
|
endif()
|
|
if(ENABLED_GPU)
|
|
message(STATUS "GPU Api: ${GPU_API}")
|
|
if(GPU_API STREQUAL "CUDA")
|
|
message(STATUS "GPU Arch: ${GPU_ARCH}")
|
|
elseif(GPU_API STREQUAL "OpenCL")
|
|
message(STATUS "OCL Tune: ${OCL_TUNE}")
|
|
endif()
|
|
endif()
|
|
if(PKG_KSPACE)
|
|
message(STATUS "Using ${FFT} as FFT")
|
|
endif()
|