forked from lijiext/lammps
129 lines
4.0 KiB
Plaintext
129 lines
4.0 KiB
Plaintext
LAMMPS Documentation
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Depending on how you obtained LAMMPS, this directory has 2 or 3
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sub-directories and optionally 2 PDF files and an ePUB file:
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src content files for LAMMPS documentation
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html HTML version of the LAMMPS manual (see html/Manual.html)
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utils utilities and settings for building the documentation
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Manual.pdf large PDF version of entire manual
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Developer.pdf small PDF with info about how LAMMPS is structured
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LAMMPS.epub Manual in ePUB format
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If you downloaded LAMMPS as a tarball from the web site, all these
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directories and files should be included.
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If you downloaded LAMMPS from the public SVN or Git repositories, then
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the HTML and PDF files are not included. Instead you need to create
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them, in one of three ways:
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(a) You can "fetch" the current HTML and PDF files from the LAMMPS web
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site. Just type "make fetch". This should create a html_www dir and
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Manual_www.pdf/Developer_www.pdf files. Note that if new LAMMPS
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features have been added more recently than the date of your version,
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the fetched documentation will include those changes (but your source
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code will not, unless you update your local repository).
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(b) You can build the HTML and PDF files yourself, by typing "make
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html" or by "make pdf", respectively. This requires various tools
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including the Python documentation processing tool Sphinx, which the
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build process will attempt to download and install on your system into
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a python virtual environment, if not already available. The PDF file
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will require a working LaTeX installation with several add-on packages
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in addition to the Python/Sphinx setup. See more details below.
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----------------
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The generation of all documentation is managed by the Makefile in this
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dir.
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Options:
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make html # generate HTML in html dir using Sphinx
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make pdf # generate 2 PDF files (Manual.pdf,Developer.pdf)
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# in this dir via Sphinx and PDFLaTeX
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make fetch # fetch HTML doc pages and 2 PDF files from web site
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# as a tarball and unpack into html dir and 2 PDFs
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make epub # generate LAMMPS.epub in ePUB format using Sphinx
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make clean # remove intermediate RST files created by HTML build
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make clean-all # remove entire build folder and any cached data
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----------------
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Installing prerequisites for HTML build
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To run the HTML documention build toolchain, Python 3 and virtualenv
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have to be installed. Here are instructions for common setups:
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# Ubuntu
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sudo apt-get install python-virtualenv
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# Fedora (up to version 21)
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# Red Hat Enterprise Linux or CentOS (up to version 7.x)
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sudo yum install python3-virtualenv
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# Fedora (since version 22)
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sudo dnf install python3-virtualenv
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# MacOS X
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## Python 3
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Download the latest Python 3 MacOS X package from
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https://www.python.org and install it. This will install both Python
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3 and pip3.
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## virtualenv
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Once Python 3 is installed, open a Terminal and type
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pip3 install virtualenv
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This will install virtualenv from the Python Package Index.
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----------------
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Installing prerequisites for PDF build
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Same as for HTML plus a compatible LaTeX installation with
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support for PDFLaTeX. Also the following LaTeX packages need
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to be installed (e.g. from texlive):
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- amsmath
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- babel
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- capt-of
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- cmap
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- fncychap
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- framed
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- geometry
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- hyperref
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- hypcap
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- needspace
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- times
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- tabulary
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- upquote
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- wrapfig
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----------------
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Installing prerequisites for epub build
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## ePUB
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Same as for HTML. This uses the same tools and configuration
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files as the HTML tree. The ePUB format conversion currently
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does not support processing mathematical expressions via MathJAX,
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so there will be limitations on some pages. For the time being
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until this is resolved, building and using the PDF format file
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is recommended instead.
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For converting the generated ePUB file to a mobi format file
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(for e-book readers like Kindle, that cannot read ePUB), you
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also need to have the 'ebook-convert' tool from the "calibre"
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software installed. http://calibre-ebook.com/
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You first create the ePUB file with 'make epub' and then do:
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ebook-convert LAMMPS.epub LAMMPS.mobi
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