lammps/src
Stan Moore 36b826348b Fix compile issues with Kokkos 2020-03-25 16:12:37 -06:00
..
ASPHERE merged in current master 2020-01-13 10:34:31 -07:00
BODY merged in current master 2020-01-13 10:34:31 -07:00
CLASS2 merged in current master 2020-01-13 10:34:31 -07:00
COLLOID Fix typo 2020-03-14 13:57:48 +09:00
COMPRESS merged in current master 2020-01-13 10:34:31 -07:00
CORESHELL Fix typo 2020-03-14 13:57:48 +09:00
DEPEND Fix more typos in src files 2017-03-07 00:55:01 -05:00
DIPOLE merged in current master 2020-01-13 10:34:31 -07:00
GPU Fix typo 2020-03-14 13:57:48 +09:00
GRANULAR correction to molecule-ID-increment logic 2020-03-08 16:06:49 -06:00
KIM Merge pull request #1941 from e-kwsm/typo 2020-03-18 20:24:06 -04:00
KOKKOS Fix compile issues with Kokkos 2020-03-25 16:12:37 -06:00
KSPACE Convert characters to UTF-8 2020-03-23 09:42:46 -04:00
LATTE more rearranging of include file order to put implementation headers first 2019-07-03 21:57:39 -04:00
MAKE Fix typo 2020-03-14 13:57:48 +09:00
MANYBODY Merge branch 'master' into collected-small-changes 2020-03-18 20:59:16 -04:00
MC merged in current master 2020-01-13 10:34:31 -07:00
MESSAGE include required header 2020-03-12 06:59:04 -04:00
MISC Merge pull request #1913 from jrgissing/molecule_template_moleculeIDs 2020-03-18 20:31:29 -04:00
MOLECULE merged in current master 2020-01-13 10:34:31 -07:00
MPIIO Fix typo 2020-03-14 13:57:48 +09:00
MSCG Fix typo 2020-03-14 13:57:48 +09:00
OPT merged in current master 2020-01-13 10:34:31 -07:00
PERI Fix typo 2020-03-14 13:57:48 +09:00
POEMS correct forward declaration of POEMS workspace class 2019-07-22 14:36:09 -04:00
PYTHON Fix typo 2020-03-14 13:57:48 +09:00
QEQ merged in current master 2020-01-13 10:34:31 -07:00
REPLICA Fix typo 2020-03-14 13:57:48 +09:00
RIGID Convert British spelling to American 2020-03-18 23:09:23 +09:00
SHOCK more rearranging of include file order to put implementation headers first 2019-07-03 21:57:39 -04:00
SNAP Keep original chunksize value set by user in case atom count changes 2020-02-26 09:42:59 -07:00
SPIN Fix typo 2020-03-14 13:57:48 +09:00
SRD correct spelling correction 2020-03-17 20:37:33 -04:00
STUBS merged in current master 2020-01-13 10:34:31 -07:00
USER-ADIOS Added 'timeout <value>' option to the adios reader, so that a rerun can concurrently run with the first simulation 2020-01-20 15:52:21 -05:00
USER-ATC Fix typo 2020-03-14 13:57:48 +09:00
USER-AWPMD merged in current master 2020-01-13 10:34:31 -07:00
USER-BOCS Changed the code in the read_F_table function to conform to the "expected behavior" description in #1572. Adopted a best-of-both-worlds approach, though, and processed the whole input file all the way through, emitting a message for each problem found, before issuing a final error message to stop processing. Updated doc to clarify requirement for uniform spacing of pressure correction points. 2019-08-02 08:46:04 -04:00
USER-CGDNA Increased tolerance for fatal error in FENE bond argument 2020-01-24 14:19:18 +00:00
USER-CGSDK merged in current master 2020-01-13 10:34:31 -07:00
USER-COLVARS Update DOI resolver 2020-03-12 16:53:24 +09:00
USER-DIFFRACTION Fix typo 2020-03-14 13:57:48 +09:00
USER-DPD Fix typo 2020-03-14 13:57:48 +09:00
USER-DRUDE Fix typo 2020-03-14 13:57:48 +09:00
USER-EFF merged in current master 2020-01-13 10:34:31 -07:00
USER-FEP merged in current master 2020-01-13 10:34:31 -07:00
USER-H5MD silence compiler warning about unused parameter 2018-11-28 22:20:42 -05:00
USER-INTEL Merge branch 'master' into collected-small-fixes 2020-03-25 06:50:11 -04:00
USER-LB more include handling cleanup in USER packages 2019-07-12 18:00:59 -04:00
USER-MANIFOLD Convert British spelling to American 2020-03-18 23:09:23 +09:00
USER-MEAMC Merge branch 'master' into collected-small-changes 2020-03-18 20:59:16 -04:00
USER-MESODPD rename USER-MESO package to USER-MESODPD and update related files and folders 2020-03-09 09:48:49 -04:00
USER-MGPT Fix typo 2020-03-14 13:57:48 +09:00
USER-MISC Merge pull request #1883 from evoyiatzis/master 2020-03-18 20:52:47 -04:00
USER-MOFFF merged in current master 2020-01-13 10:34:31 -07:00
USER-MOLFILE revert reformatting of unrelated file 2020-01-20 09:20:42 -05:00
USER-NETCDF MAINT: Replaced special character with a space. 2019-01-23 11:29:49 +01:00
USER-OMP Fix typo 2020-03-14 13:57:48 +09:00
USER-PHONON Fix typo 2020-03-14 13:57:48 +09:00
USER-PLUMED update plumed support to include version 2.6.0. Fix bug in API check 2020-02-13 16:03:58 +01:00
USER-PTM more strict argument checking and initializing output data to zero 2020-02-26 13:12:39 +01:00
USER-QMMM replace C-style include files with their C++ equivalents 2018-04-27 18:00:24 -04:00
USER-QTB fix up some leftover include issues that got overlooked in previous changes 2019-07-11 07:22:41 -04:00
USER-QUIP Convert British spelling to American 2020-03-18 23:09:23 +09:00
USER-REACTION Fix typo 2020-03-14 13:57:48 +09:00
USER-REAXC merged in current master 2020-01-13 10:34:31 -07:00
USER-SCAFACOS use ev_init for kspace 2019-03-13 17:55:30 +01:00
USER-SDPD add check for required atom properties to USER-SDPD 2020-02-25 14:08:55 +01:00
USER-SMD Fix typo 2020-03-14 13:57:48 +09:00
USER-SMTBQ Convert characters to UTF-8 2020-03-23 09:42:46 -04:00
USER-SPH Merge branch 'master' into improve-include-consistency 2019-07-10 14:18:42 -04:00
USER-TALLY update packages USER-SPH, USER-SMTBQ, USER-SDPD, USER-TALLY, USER-UEF, USER-YAFF 2019-07-09 16:11:25 -04:00
USER-UEF Fix typo 2020-03-14 13:57:48 +09:00
USER-VTK Fix typo 2020-03-14 13:57:48 +09:00
USER-YAFF Fix typo 2020-03-14 13:57:48 +09:00
VORONOI Fix typo 2020-03-14 13:57:48 +09:00
.gitignore Merge pull request #1096 from ProfessorMiller/master 2020-01-15 17:35:03 -05:00
Depend.sh first commit: added SDPD 2018-10-30 17:40:00 +03:30
Install.sh update dependencies for USER-CGSDK package. make script permissions consistent 2018-05-09 16:13:54 -04:00
Make.sh add support for creating packages_*.h files in conventional make 2019-04-07 20:52:15 -04:00
Makefile rename USER-MESO package to USER-MESODPD and update related files and folders 2020-03-09 09:48:49 -04:00
Makefile.list rollback unneeded change to Makefile.list per review 2019-06-21 15:50:52 +01:00
Makefile.package.empty
Makefile.package.settings.empty
Makefile.print add "make mode=print <machine>" to print out compiler and linker flags and libs for any available makefile 2020-02-19 18:11:34 +01:00
Package.sh update dependencies for USER-CGSDK package. make script permissions consistent 2018-05-09 16:13:54 -04:00
Purge.list add support for creating packages_*.h files in conventional make 2019-04-07 20:52:15 -04:00
accelerator_kokkos.h Finalize Kokkos on error exit 2020-02-27 08:51:02 -07:00
accelerator_omp.h Fix USER-OMP compilation with CMake 2018-08-27 22:11:15 -04:00
angle.cpp merged in current master 2020-01-13 10:34:31 -07:00
angle.h merged in current master 2020-01-13 10:34:31 -07:00
angle_deprecated.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
angle_deprecated.h implement deprecated styles for bond, angle, dihedral, and improper 2018-10-17 16:26:20 -04:00
angle_hybrid.cpp merged in current master 2020-01-13 10:34:31 -07:00
angle_hybrid.h headers that directly or indirectly include pointers.h may assume <cstdio> is loaded, too. 2019-06-27 10:12:53 -04:00
angle_zero.cpp merged in current master 2020-01-13 10:34:31 -07:00
angle_zero.h headers that directly or indirectly include pointers.h may assume <cstdio> is loaded, too. 2019-06-27 10:12:53 -04:00
atom.cpp we can use error->all() and also check the coordinate conversion for valid data 2020-03-17 16:53:22 -04:00
atom.h merged in current master 2020-01-13 10:34:31 -07:00
atom_map.cpp merged in current master 2020-01-13 10:34:31 -07:00
atom_map.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
atom_masks.h
atom_vec.cpp make certain, the molecular flag is always initialized 2020-03-21 01:08:09 -04:00
atom_vec.h modified versions of creating atoms on subset of lattice, ditto for set type/fraction 2020-01-21 13:31:47 -07:00
atom_vec_atomic.cpp Merge branch 'master' into improve-include-consistency 2019-07-10 14:18:42 -04:00
atom_vec_atomic.h
atom_vec_body.cpp Merge branch 'master' into improve-include-consistency 2019-07-10 14:18:42 -04:00
atom_vec_body.h some more include file consistency changes 2019-06-27 17:11:53 -04:00
atom_vec_charge.cpp Merge branch 'master' into improve-include-consistency 2019-07-10 14:18:42 -04:00
atom_vec_charge.h
atom_vec_ellipsoid.cpp Merge branch 'master' into improve-include-consistency 2019-07-19 17:57:58 -04:00
atom_vec_ellipsoid.h make nlocal_bonus accessible 2019-02-17 17:14:01 -05:00
atom_vec_hybrid.cpp Merge pull request #1556 from lammps/bug-maxexchange 2019-07-30 17:09:18 -04:00
atom_vec_hybrid.h more header cleanup 2019-06-27 20:52:23 -04:00
atom_vec_line.cpp Merge branch 'master' into improve-include-consistency 2019-07-10 14:18:42 -04:00
atom_vec_line.h make nlocal_bonus accessible 2019-02-17 17:14:01 -05:00
atom_vec_sphere.cpp Merge branch 'master' into improve-include-consistency 2019-07-10 14:18:42 -04:00
atom_vec_sphere.h
atom_vec_tri.cpp Merge branch 'master' into improve-include-consistency 2019-07-10 14:18:42 -04:00
atom_vec_tri.h make nlocal_bonus accessible 2019-02-17 17:14:01 -05:00
balance.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
balance.h some more include file consistency changes 2019-06-27 17:11:53 -04:00
body.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
body.h Merge pull request #1556 from lammps/bug-maxexchange 2019-07-30 17:09:18 -04:00
bond.cpp merged in current master 2020-01-13 10:34:31 -07:00
bond.h Merge branch 'master' into improve-include-consistency 2019-07-26 17:24:32 -04:00
bond_deprecated.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
bond_deprecated.h implement deprecated styles for bond, angle, dihedral, and improper 2018-10-17 16:26:20 -04:00
bond_hybrid.cpp merged in current master 2020-01-13 10:34:31 -07:00
bond_hybrid.h bulk removal of #include <cstdio> from header files 2019-06-27 21:54:07 -04:00
bond_zero.cpp merged in current master 2020-01-13 10:34:31 -07:00
bond_zero.h bulk removal of #include <cstdio> from header files 2019-06-27 21:54:07 -04:00
change_box.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
change_box.h port documentation spelling fixes to comments or strings in source code. 2018-11-19 16:15:24 -05:00
citeme.cpp bulk removal of #include <cstdio> from header files 2019-06-27 21:54:07 -04:00
citeme.h more header cleanup 2019-06-27 20:52:23 -04:00
comm.cpp Fix typo 2020-03-14 13:57:48 +09:00
comm.h Merge pull request #1556 from lammps/bug-maxexchange 2019-07-30 17:09:18 -04:00
comm_brick.cpp Fix typo 2020-03-14 13:57:48 +09:00
comm_brick.h more robust version of atom exchange size 2019-07-09 16:17:54 -06:00
comm_tiled.cpp Fix typo 2020-03-14 13:57:48 +09:00
comm_tiled.h no need to include mpi.h in headers that include pointers.h (directly or indirectly) 2019-08-13 11:04:13 -04:00
compute.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute.h merged in current master 2020-01-13 10:34:31 -07:00
compute_adf.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_adf.h bulk removal of #include <cstdio> from header files 2019-06-27 21:54:07 -04:00
compute_aggregate_atom.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_aggregate_atom.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
compute_angle.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_angle.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
compute_angle_local.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_angle_local.h add variable option to compute bond/angle/dihedral local 2018-09-04 14:48:44 -06:00
compute_angmom_chunk.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_angmom_chunk.h
compute_bond.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_bond.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
compute_bond_local.cpp merged in current master 2020-01-13 10:34:31 -07:00
compute_bond_local.h add variable option to compute bond/angle/dihedral local 2018-09-04 14:48:44 -06:00
compute_centro_atom.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_centro_atom.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
compute_centroid_stress_atom.cpp merged in current master 2020-01-13 10:34:31 -07:00
compute_centroid_stress_atom.h merged in current master 2020-01-13 10:34:31 -07:00
compute_chunk_atom.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_chunk_atom.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
compute_chunk_spread_atom.cpp Merge branch 'master' into collected-small-changes 2019-07-30 14:14:11 -04:00
compute_chunk_spread_atom.h avoid class initialization order warnings 2018-09-10 22:32:56 -04:00
compute_cluster_atom.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_cluster_atom.h add new compute fragment/atom 2017-08-18 19:07:32 -04:00
compute_cna_atom.cpp convert british spelling to american 2020-03-17 20:41:49 -04:00
compute_cna_atom.h Fix typos in src files 2017-03-05 21:03:40 -05:00
compute_com.cpp make certain that the vector storage and the size_vector variable are consistent in computes 2019-07-01 17:25:02 -04:00
compute_com.h
compute_com_chunk.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_com_chunk.h
compute_contact_atom.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_contact_atom.h Fix typos in src files 2017-03-05 21:03:40 -05:00
compute_coord_atom.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_coord_atom.h there really isn't a problem with calling this compute multiple times 2019-05-17 15:26:35 -04:00
compute_deprecated.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_deprecated.h add DEPRECATED compute style 2018-10-17 16:05:10 -04:00
compute_dihedral.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_dihedral.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
compute_dihedral_local.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_dihedral_local.h remove dead code and silence compiler warnings 2018-11-15 16:50:56 -05:00
compute_dipole_chunk.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_dipole_chunk.h
compute_displace_atom.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_displace_atom.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
compute_erotate_sphere.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_erotate_sphere.h
compute_erotate_sphere_atom.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_erotate_sphere_atom.h
compute_fragment_atom.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_fragment_atom.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
compute_global_atom.cpp move memory allocation for atom style variable data where it belongs and cannot be skipped 2020-01-22 14:34:12 -05:00
compute_global_atom.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
compute_group_group.cpp Merge branch 'master' into improve-include-consistency 2019-07-09 14:50:00 -04:00
compute_group_group.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
compute_gyration.cpp Merge branch 'master' into improve-include-consistency 2019-07-09 14:50:00 -04:00
compute_gyration.h
compute_gyration_chunk.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_gyration_chunk.h
compute_heat_flux.cpp merged in current master 2020-01-13 10:34:31 -07:00
compute_heat_flux.h
compute_hexorder_atom.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_hexorder_atom.h Fix typos in src files 2017-03-05 21:03:40 -05:00
compute_improper.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_improper.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
compute_improper_local.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_improper_local.h
compute_inertia_chunk.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_inertia_chunk.h
compute_ke.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_ke.h
compute_ke_atom.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_ke_atom.h
compute_msd.cpp Merge branch 'master' into improve-include-consistency 2019-07-09 14:50:00 -04:00
compute_msd.h
compute_msd_chunk.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_msd_chunk.h
compute_omega_chunk.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_omega_chunk.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
compute_orientorder_atom.cpp Fix typo 2020-03-14 13:57:48 +09:00
compute_orientorder_atom.h Added Wlhat 2019-08-25 12:06:25 -06:00
compute_pair.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_pair.h Extend compute pair to handle multiple instances of a given pair style 2018-10-05 20:34:12 +02:00
compute_pair_local.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_pair_local.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
compute_pe.cpp Compute pe doesn't touch atom data 2019-09-09 12:29:46 -06:00
compute_pe.h
compute_pe_atom.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_pe_atom.h
compute_pressure.cpp Merge pull request #1511 from jdevemy/master 2019-07-29 22:15:20 -04:00
compute_pressure.h Recheck existence of pair style in init 2019-07-02 16:13:20 +02:00
compute_property_atom.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_property_atom.h more 'war on tabs' 2019-03-29 10:21:44 -04:00
compute_property_chunk.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_property_chunk.h Fix typos in src files 2017-03-05 21:03:40 -05:00
compute_property_local.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_property_local.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
compute_rdf.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_rdf.h bulk removal of #include <cstdio> from header files 2019-06-27 21:54:07 -04:00
compute_reduce.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_reduce.h
compute_reduce_chunk.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_reduce_chunk.h remove trailing whitespace 2018-11-30 08:00:08 -05:00
compute_reduce_region.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_reduce_region.h
compute_slice.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_slice.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
compute_stress_atom.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_stress_atom.h
compute_temp.cpp Merge branch 'master' into improve-include-consistency 2019-07-09 14:50:00 -04:00
compute_temp.h
compute_temp_chunk.cpp Merge branch 'master' into improve-include-consistency 2019-07-09 14:50:00 -04:00
compute_temp_chunk.h
compute_temp_com.cpp Merge branch 'master' into improve-include-consistency 2019-07-09 14:50:00 -04:00
compute_temp_com.h port thread-safe temperature biasing from LAMMPS-ICMS 2017-05-16 18:15:13 -04:00
compute_temp_deform.cpp Merge branch 'master' into improve-include-consistency 2019-07-09 14:50:00 -04:00
compute_temp_deform.h port thread-safe temperature biasing from LAMMPS-ICMS 2017-05-16 18:15:13 -04:00
compute_temp_partial.cpp Merge branch 'master' into improve-include-consistency 2019-07-09 14:50:00 -04:00
compute_temp_partial.h port thread-safe temperature biasing from LAMMPS-ICMS 2017-05-16 18:15:13 -04:00
compute_temp_profile.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_temp_profile.h port thread-safe temperature biasing from LAMMPS-ICMS 2017-05-16 18:15:13 -04:00
compute_temp_ramp.cpp Merge branch 'master' into improve-include-consistency 2019-07-09 14:50:00 -04:00
compute_temp_ramp.h port thread-safe temperature biasing from LAMMPS-ICMS 2017-05-16 18:15:13 -04:00
compute_temp_region.cpp Merge branch 'master' into improve-include-consistency 2019-07-09 14:50:00 -04:00
compute_temp_region.h port thread-safe temperature biasing from LAMMPS-ICMS 2017-05-16 18:15:13 -04:00
compute_temp_sphere.cpp Merge branch 'master' into improve-include-consistency 2019-07-09 14:50:00 -04:00
compute_temp_sphere.h port thread-safe temperature biasing from LAMMPS-ICMS 2017-05-16 18:15:13 -04:00
compute_torque_chunk.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_torque_chunk.h
compute_vacf.cpp Merge branch 'master' into improve-include-consistency 2019-07-09 14:50:00 -04:00
compute_vacf.h
compute_vcm_chunk.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
compute_vcm_chunk.h
create_atoms.cpp correction to molecule-ID-increment logic 2020-03-08 16:06:49 -06:00
create_atoms.h remove trailing whitespace 2020-01-21 15:46:28 -05:00
create_bonds.cpp merged in current master 2020-01-13 10:34:31 -07:00
create_bonds.h merged in current master 2020-01-13 10:34:31 -07:00
create_box.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
create_box.h port documentation spelling fixes to comments or strings in source code. 2018-11-19 16:15:24 -05:00
delete_atoms.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
delete_atoms.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
delete_bonds.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
delete_bonds.h
deprecated.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
deprecated.h make default style name for deprecated styles uppercase, so it is considered internal 2018-10-17 16:04:52 -04:00
dihedral.cpp merged in current master 2020-01-13 10:34:31 -07:00
dihedral.h merged in current master 2020-01-13 10:34:31 -07:00
dihedral_deprecated.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
dihedral_deprecated.h implement deprecated styles for bond, angle, dihedral, and improper 2018-10-17 16:26:20 -04:00
dihedral_hybrid.cpp merged in current master 2020-01-13 10:34:31 -07:00
dihedral_hybrid.h bulk removal of #include <cstdio> from header files 2019-06-27 21:54:07 -04:00
dihedral_zero.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
dihedral_zero.h bulk removal of #include <cstdio> from header files 2019-06-27 21:54:07 -04:00
displace_atoms.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
displace_atoms.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
domain.cpp merged in current master 2020-01-13 10:34:31 -07:00
domain.h continue cleaning up include file lists 2019-06-29 09:37:44 -04:00
dump.cpp merged in current master 2020-01-13 10:34:31 -07:00
dump.h merged in current master 2020-01-13 10:34:31 -07:00
dump_atom.cpp merged in current master 2020-01-13 10:34:31 -07:00
dump_atom.h
dump_cfg.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
dump_cfg.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
dump_custom.cpp merged in current master 2020-01-13 10:34:31 -07:00
dump_custom.h Commit modifs before release 1 (03/26/18) 2018-04-26 15:26:31 -06:00
dump_dcd.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
dump_dcd.h
dump_deprecated.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
dump_deprecated.h add deprecated dump and region styles 2018-10-17 18:13:12 -04:00
dump_image.cpp Fix typo 2020-03-14 13:57:48 +09:00
dump_image.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
dump_local.cpp merged in current master 2020-01-13 10:34:31 -07:00
dump_local.h merged in current master 2020-01-13 10:34:31 -07:00
dump_movie.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
dump_movie.h
dump_xyz.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
dump_xyz.h
error.cpp Finalize Kokkos on error exit 2020-02-27 08:51:02 -07:00
error.h
exceptions.h
finish.cpp some cleanup for missed steps in previous change sets 2019-07-12 16:37:01 -04:00
finish.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
fix.cpp Merge pull request #1556 from lammps/bug-maxexchange 2019-07-30 17:09:18 -04:00
fix.h Merge pull request #1556 from lammps/bug-maxexchange 2019-07-30 17:09:18 -04:00
fix_adapt.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_adapt.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
fix_addforce.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_addforce.h Fix typos in src files 2017-03-05 21:03:40 -05:00
fix_ave_atom.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_ave_atom.h bulk removal of #include <cstdio> from header files 2019-06-27 21:54:07 -04:00
fix_ave_chunk.cpp merged in current master 2020-01-13 10:34:31 -07:00
fix_ave_chunk.h bulk removal of #include <cstdio> from header files 2019-06-27 21:54:07 -04:00
fix_ave_correlate.cpp merged in current master 2020-01-13 10:34:31 -07:00
fix_ave_correlate.h bulk removal of #include <cstdio> from header files 2019-06-27 21:54:07 -04:00
fix_ave_histo.cpp merged in current master 2020-01-13 10:34:31 -07:00
fix_ave_histo.h bulk removal of #include <cstdio> from header files 2019-06-27 21:54:07 -04:00
fix_ave_histo_weight.cpp merged in current master 2020-01-13 10:34:31 -07:00
fix_ave_histo_weight.h bulk removal of #include <cstdio> from header files 2019-06-27 21:54:07 -04:00
fix_ave_time.cpp merged in current master 2020-01-13 10:34:31 -07:00
fix_ave_time.h bulk removal of #include <cstdio> from header files 2019-06-27 21:54:07 -04:00
fix_aveforce.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_aveforce.h
fix_balance.cpp Fix typo 2020-03-14 13:57:48 +09:00
fix_balance.h bulk removal of #include <cstdio> from header files 2019-06-27 21:54:07 -04:00
fix_box_relax.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_box_relax.h
fix_controller.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_controller.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
fix_deform.cpp Fix typo 2020-03-14 13:57:48 +09:00
fix_deform.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
fix_deprecated.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_deprecated.h make default style name for deprecated styles uppercase, so it is considered internal 2018-10-17 16:04:52 -04:00
fix_drag.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_drag.h
fix_dt_reset.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_dt_reset.h Limit atom energy change in fix dt/reset 2018-05-28 10:57:40 +03:00
fix_enforce2d.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_enforce2d.h Forgot to include change in fix_enforce2d to access fixlist in kokkos port. 2018-06-29 11:58:27 -04:00
fix_external.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_external.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
fix_gravity.cpp silence compiler warning 2020-01-20 07:06:00 -05:00
fix_gravity.h merged in current master 2020-01-13 10:34:31 -07:00
fix_group.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_group.h add extract to fix_group 2018-04-24 22:53:54 -06:00
fix_halt.cpp port diskfree detection in fix halt for MacOSX 2020-03-11 19:28:58 -04:00
fix_halt.h add diskfree check to fix halt 2020-03-09 16:23:20 -04:00
fix_heat.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_heat.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
fix_indent.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_indent.h
fix_langevin.cpp Add unit conversion in setup() 2020-01-22 17:13:10 +01:00
fix_langevin.h merged in current master 2020-01-13 10:34:31 -07:00
fix_lineforce.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_lineforce.h
fix_minimize.cpp Add Kokkos version of minimize 2019-08-28 09:41:15 -06:00
fix_minimize.h Add Kokkos version of minimize 2019-08-28 09:41:15 -06:00
fix_momentum.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_momentum.h fix ave/chunk fixes, 2d disc option, fix_modify dynamic/dof 2017-03-23 15:31:27 -06:00
fix_move.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_move.h bulk removal of #include <cstdio> from header files 2019-06-27 21:54:07 -04:00
fix_neigh_history.cpp merged in current master 2020-01-13 10:34:31 -07:00
fix_neigh_history.h continue cleaning up include file lists 2019-06-29 09:37:44 -04:00
fix_nh.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_nh.h remove cauchystat changes from fix_nh.cpp/.h/.txt (again). delete misplaced example that came back from the dead, too. 2018-11-14 17:22:31 -05:00
fix_nh_sphere.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_nh_sphere.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
fix_nph.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_nph.h
fix_nph_sphere.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_nph_sphere.h
fix_npt.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_npt.h
fix_npt_sphere.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_npt_sphere.h
fix_numdiff.cpp silence compiler warnings 2020-03-19 00:50:30 -04:00
fix_numdiff.h Removed misleading doc information and included errors 2020-03-10 16:12:02 -06:00
fix_nve.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_nve.h
fix_nve_limit.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_nve_limit.h
fix_nve_noforce.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_nve_noforce.h
fix_nve_sphere.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_nve_sphere.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
fix_nvt.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_nvt.h
fix_nvt_sllod.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_nvt_sllod.h
fix_nvt_sphere.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_nvt_sphere.h
fix_planeforce.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_planeforce.h
fix_press_berendsen.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_press_berendsen.h
fix_print.cpp merged in current master 2020-01-13 10:34:31 -07:00
fix_print.h merged in current master 2020-01-13 10:34:31 -07:00
fix_property_atom.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_property_atom.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
fix_read_restart.cpp continue cleaning up include file lists 2019-06-29 09:37:44 -04:00
fix_read_restart.h
fix_recenter.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_recenter.h
fix_respa.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_respa.h
fix_restrain.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_restrain.h forgot to reduce energies 2018-05-08 10:46:41 +02:00
fix_setforce.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_setforce.h
fix_spring.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_spring.h
fix_spring_chunk.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_spring_chunk.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
fix_spring_rg.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_spring_rg.h
fix_spring_self.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_spring_self.h
fix_store.cpp sync with master 2020-01-14 10:40:05 -07:00
fix_store.h bulk removal of #include <cstdio> from header files 2019-06-27 21:54:07 -04:00
fix_store_force.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_store_force.h
fix_store_state.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_store_state.h
fix_temp_berendsen.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_temp_berendsen.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
fix_temp_csld.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_temp_csld.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
fix_temp_csvr.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_temp_csvr.h
fix_temp_rescale.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_temp_rescale.h
fix_tmd.cpp Fix typo 2020-03-14 13:57:48 +09:00
fix_tmd.h bulk removal of #include <cstdio> from header files 2019-06-27 21:54:07 -04:00
fix_vector.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_vector.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
fix_viscous.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_viscous.h
fix_wall.cpp implement fix wall/morse based on fix wall/region and fix wall/harmonic 2019-08-21 16:00:14 -04:00
fix_wall.h implement fix wall/morse based on fix wall/region and fix wall/harmonic 2019-08-21 16:00:14 -04:00
fix_wall_harmonic.cpp more include file cleanup 2019-06-30 15:53:17 -04:00
fix_wall_harmonic.h
fix_wall_lj93.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_wall_lj93.h Adding fix_wall_lj93_kokkos 2017-03-02 14:02:49 -07:00
fix_wall_lj126.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_wall_lj126.h
fix_wall_lj1043.cpp put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
fix_wall_lj1043.h
fix_wall_morse.cpp implement fix wall/morse based on fix wall/region and fix wall/harmonic 2019-08-21 16:00:14 -04:00
fix_wall_morse.h implement fix wall/morse based on fix wall/region and fix wall/harmonic 2019-08-21 16:00:14 -04:00
fix_wall_reflect.cpp silence compiler warning 2020-01-20 07:06:49 -05:00
fix_wall_reflect.h fix whitespace issues 2020-01-13 22:47:06 -05:00
fix_wall_region.cpp Commit before changing branches. 2020-01-10 11:31:21 +01:00
fix_wall_region.h Added a Morse potential option to 'fix wall/region' 2019-02-21 01:49:04 +01:00
force.cpp merged in current master 2020-01-13 10:34:31 -07:00
force.h merged in current master 2020-01-13 10:34:31 -07:00
group.cpp merged in current master 2020-01-13 10:34:31 -07:00
group.h bulk removal of #include <cstdio> from header files 2019-06-27 21:54:07 -04:00
hashlittle.cpp Fix typo 2020-03-14 13:57:48 +09:00
hashlittle.h put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
image.cpp avoid segfault 2020-01-22 12:41:59 -05:00
image.h bulk removal of #include <cstdio> from header files 2019-06-27 21:54:07 -04:00
imbalance.cpp
imbalance.h more include file cleanup 2019-06-30 15:53:17 -04:00
imbalance_group.cpp
imbalance_group.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
imbalance_neigh.cpp put implementation header first for all remaining main folder source files 2019-07-03 19:34:13 -04:00
imbalance_neigh.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
imbalance_store.cpp put implementation header first for all remaining main folder source files 2019-07-03 19:34:13 -04:00
imbalance_store.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
imbalance_time.cpp put implementation header first for all remaining main folder source files 2019-07-03 19:34:13 -04:00
imbalance_time.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
imbalance_var.cpp put implementation header first for all remaining main folder source files 2019-07-03 19:34:13 -04:00
imbalance_var.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
improper.cpp merged in current master 2020-01-13 10:34:31 -07:00
improper.h merged in current master 2020-01-13 10:34:31 -07:00
improper_deprecated.cpp put implementation header first for all remaining main folder source files 2019-07-03 19:34:13 -04:00
improper_deprecated.h implement deprecated styles for bond, angle, dihedral, and improper 2018-10-17 16:26:20 -04:00
improper_hybrid.cpp merged in current master 2020-01-13 10:34:31 -07:00
improper_hybrid.h bulk removal of #include <cstdio> from header files 2019-06-27 21:54:07 -04:00
improper_zero.cpp put implementation header first for all remaining main folder source files 2019-07-03 19:34:13 -04:00
improper_zero.h bulk removal of #include <cstdio> from header files 2019-06-27 21:54:07 -04:00
info.cpp merged in current master 2020-01-13 10:34:31 -07:00
info.h merged in current master 2020-01-13 10:34:31 -07:00
input.cpp Fix typo 2020-03-14 13:57:48 +09:00
input.h merged in current master 2020-01-13 10:34:31 -07:00
integrate.cpp merged in current master 2020-01-13 10:34:31 -07:00
integrate.h merged in current master 2020-01-13 10:34:31 -07:00
irregular.cpp Merge pull request #1556 from lammps/bug-maxexchange 2019-07-30 17:09:18 -04:00
irregular.h no need to include mpi.h in headers that include pointers.h (directly or indirectly) 2019-08-13 11:04:13 -04:00
kspace.cpp switch OpenMP pragma to default(shared), so it is compatible with all OpenMP standard versions 2020-01-31 08:32:14 -05:00
kspace.h Fix typo 2020-03-14 13:57:48 +09:00
kspace_deprecated.cpp put implementation header first for all remaining main folder source files 2019-07-03 19:34:13 -04:00
kspace_deprecated.h fix some typos caused by trusting emacs' smart case-preserving replace too much 2018-10-19 16:11:13 -04:00
lammps.cpp Fix typo 2020-03-14 13:57:48 +09:00
lammps.h lammps.h must include cstdio and mpi.h 2019-06-27 22:14:06 -04:00
lattice.cpp put implementation header first for all remaining main folder source files 2019-07-03 19:34:13 -04:00
lattice.h
library.cpp provide access to number of local data rows for fixes 2020-03-07 10:58:35 -05:00
library.h add example to COUPLE folder demonstrating loading LAMMPS as a plugin. 2020-02-25 19:07:49 +01:00
lmppython.cpp continuing to clean up include file lists 2019-07-01 15:59:16 -04:00
lmppython.h continuing to clean up include file lists 2019-07-01 15:59:16 -04:00
lmprestart.h rename lmp_restart.h to lmprestart.h to avoid confusing it with lmp_<machine> files 2020-01-31 11:18:08 -05:00
lmptype.h require C++11 to compile LAMMPS 2020-03-04 14:28:47 -05:00
lmpwindows.h fix typo 2019-05-30 18:36:09 -04:00
main.cpp correct compilation error with exceptions enabled in main.cpp 2019-08-01 08:14:27 -04:00
math_complex.h remove deprecated 'register' keyword. closes #922 2018-05-18 17:43:18 -04:00
math_const.h
math_extra.cpp Revert "new versions of jacobi() method" 2019-07-26 09:38:32 -04:00
math_extra.h move functions in MathExtra namespace to math_extra.h header file 2020-01-15 13:42:14 -05:00
math_special.cpp merged in current master 2020-01-13 10:34:31 -07:00
math_special.h replace C-style include files with their C++ equivalents 2018-04-27 18:00:24 -04:00
math_vector.h remove deprecated 'register' keyword. closes #922 2018-05-18 17:43:18 -04:00
memory.cpp add missing include for compiling with intel compilers without TBB 2019-09-13 09:47:02 -04:00
memory.h more include file cleanup 2019-06-30 15:53:17 -04:00
mergesort.h apply fix for merge sort from issue #1163 by @jtfrey and re-enable it 2018-10-23 08:57:33 -04:00
min.cpp remove trailing whitespace 2020-01-30 17:02:06 -05:00
min.h remove trailing whitespace 2020-01-30 17:02:06 -05:00
min_cg.cpp silence compiler warning and provide extra comment about optimization 2020-03-09 09:17:49 -04:00
min_cg.h
min_fire.cpp whitespace fix 2020-03-11 09:08:40 -04:00
min_fire.h special v evaluation to limite dtv each time v is zeroed 2020-03-05 11:39:48 +01:00
min_fire_old.cpp Change fire to fire/old and fire2 to fire. Implement normstyle in fire. Update author affiliation. 2020-01-28 14:51:23 +01:00
min_fire_old.h Change fire to fire/old and fire2 to fire. Implement normstyle in fire. Update author affiliation. 2020-01-28 14:51:23 +01:00
min_hftn.cpp merged in current master 2020-01-13 10:34:31 -07:00
min_hftn.h
min_linesearch.cpp put implementation header first for all remaining main folder source files 2019-07-03 19:34:13 -04:00
min_linesearch.h
min_quickmin.cpp merged in current master 2020-01-13 10:34:31 -07:00
min_quickmin.h
min_sd.cpp merged in current master 2020-01-13 10:34:31 -07:00
min_sd.h
minimize.cpp Add Kokkos version of minimize 2019-08-28 09:41:15 -06:00
minimize.h
modify.cpp reset Modify::n_timeflag in post_run() so we won't skip computes defined between runs 2020-02-11 00:30:09 -05:00
modify.h bulk removal of #include <cstdio> from header files 2019-06-27 21:54:07 -04:00
molecule.cpp fix bug when allocating and freeing newly added data structures 2020-03-19 00:51:14 -04:00
molecule.h rearrange pointer variables to a more logical location, quell compiler warning and initialize all pointer 2020-03-18 22:51:16 -04:00
mpiio.h minor tweaks to already processed files 2019-07-08 16:22:55 -04:00
my_page.h posix_memalign() does not exist on windows, so we have to workaround using it with USER-INTEL 2019-04-01 17:51:53 -04:00
my_pool_chunk.h Fix typo 2020-03-14 13:57:48 +09:00
nbin.cpp Merge branch 'master' into improve-include-consistency 2019-07-09 14:50:00 -04:00
nbin.h Fix issue in Kokkos neighor binning when using non-Kokkos lists on GPUs 2019-07-09 09:43:50 -06:00
nbin_standard.cpp move enum{NSQ,BIN,MULTI} to the Neighbor class in neighbor.h 2018-05-09 23:46:09 -04:00
nbin_standard.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
neigh_list.cpp merged in current master 2020-01-13 10:34:31 -07:00
neigh_list.h merged in current master 2020-01-13 10:34:31 -07:00
neigh_request.cpp Fix typo 2020-03-14 13:57:48 +09:00
neigh_request.h whitespace cleanup 2018-03-15 21:57:45 -04:00
neighbor.cpp remove dead code 2020-01-29 14:34:03 -05:00
neighbor.h remove dead code 2020-01-29 14:34:03 -05:00
npair.cpp put implementation header first for all remaining main folder source files 2019-07-03 19:34:13 -04:00
npair.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
npair_copy.cpp more include file cleanup 2019-06-30 15:53:17 -04:00
npair_copy.h
npair_full_bin.cpp more include file cleanup 2019-06-30 15:53:17 -04:00
npair_full_bin.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
npair_full_bin_atomonly.cpp more include file cleanup 2019-06-30 15:53:17 -04:00
npair_full_bin_atomonly.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
npair_full_bin_ghost.cpp continuing to clean up include file lists 2019-07-01 15:59:16 -04:00
npair_full_bin_ghost.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
npair_full_multi.cpp continuing to clean up include file lists 2019-07-01 15:59:16 -04:00
npair_full_multi.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
npair_full_nsq.cpp continuing to clean up include file lists 2019-07-01 15:59:16 -04:00
npair_full_nsq.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
npair_full_nsq_ghost.cpp continuing to clean up include file lists 2019-07-01 15:59:16 -04:00
npair_full_nsq_ghost.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
npair_half_bin_atomonly_newton.cpp continuing to clean up include file lists 2019-07-01 15:59:16 -04:00
npair_half_bin_atomonly_newton.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
npair_half_bin_newtoff.cpp continuing to clean up include file lists 2019-07-01 15:59:16 -04:00
npair_half_bin_newtoff.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
npair_half_bin_newtoff_ghost.cpp continuing to clean up include file lists 2019-07-01 15:59:16 -04:00
npair_half_bin_newtoff_ghost.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
npair_half_bin_newton.cpp continuing to clean up include file lists 2019-07-01 15:59:16 -04:00
npair_half_bin_newton.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
npair_half_bin_newton_tri.cpp continuing to clean up include file lists 2019-07-01 15:59:16 -04:00
npair_half_bin_newton_tri.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
npair_half_multi_newtoff.cpp continuing to clean up include file lists 2019-07-01 15:59:16 -04:00
npair_half_multi_newtoff.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
npair_half_multi_newton.cpp continuing to clean up include file lists 2019-07-01 15:59:16 -04:00
npair_half_multi_newton.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
npair_half_multi_newton_tri.cpp continuing to clean up include file lists 2019-07-01 15:59:16 -04:00
npair_half_multi_newton_tri.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
npair_half_nsq_newtoff.cpp continuing to clean up include file lists 2019-07-01 15:59:16 -04:00
npair_half_nsq_newtoff.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
npair_half_nsq_newtoff_ghost.cpp continuing to clean up include file lists 2019-07-01 15:59:16 -04:00
npair_half_nsq_newtoff_ghost.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
npair_half_nsq_newton.cpp continuing to clean up include file lists 2019-07-01 15:59:16 -04:00
npair_half_nsq_newton.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
npair_half_respa_bin_newtoff.cpp continuing to clean up include file lists 2019-07-01 15:59:16 -04:00
npair_half_respa_bin_newtoff.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
npair_half_respa_bin_newton.cpp continuing to clean up include file lists 2019-07-01 15:59:16 -04:00
npair_half_respa_bin_newton.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
npair_half_respa_bin_newton_tri.cpp continuing to clean up include file lists 2019-07-01 15:59:16 -04:00
npair_half_respa_bin_newton_tri.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
npair_half_respa_nsq_newtoff.cpp continuing to clean up include file lists 2019-07-01 15:59:16 -04:00
npair_half_respa_nsq_newtoff.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
npair_half_respa_nsq_newton.cpp continuing to clean up include file lists 2019-07-01 15:59:16 -04:00
npair_half_respa_nsq_newton.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
npair_half_size_bin_newtoff.cpp continuing to clean up include file lists 2019-07-01 15:59:16 -04:00
npair_half_size_bin_newtoff.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
npair_half_size_bin_newton.cpp continuing to clean up include file lists 2019-07-01 15:59:16 -04:00
npair_half_size_bin_newton.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
npair_half_size_bin_newton_tri.cpp continuing to clean up include file lists 2019-07-01 15:59:16 -04:00
npair_half_size_bin_newton_tri.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
npair_half_size_nsq_newtoff.cpp continuing to clean up include file lists 2019-07-01 15:59:16 -04:00
npair_half_size_nsq_newtoff.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
npair_half_size_nsq_newton.cpp continuing to clean up include file lists 2019-07-01 15:59:16 -04:00
npair_half_size_nsq_newton.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
npair_halffull_newtoff.cpp continuing to clean up include file lists 2019-07-01 15:59:16 -04:00
npair_halffull_newtoff.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
npair_halffull_newton.cpp continuing to clean up include file lists 2019-07-01 15:59:16 -04:00
npair_halffull_newton.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
npair_skip.cpp continuing to clean up include file lists 2019-07-01 15:59:16 -04:00
npair_skip.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
npair_skip_respa.cpp continue cleaning up include files based on IWYU 2019-07-02 15:10:52 -04:00
npair_skip_respa.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
npair_skip_size.cpp continue cleaning up include files based on IWYU 2019-07-02 15:10:52 -04:00
npair_skip_size.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
npair_skip_size_off2on.cpp continue cleaning up include files based on IWYU 2019-07-02 15:10:52 -04:00
npair_skip_size_off2on.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
npair_skip_size_off2on_oneside.cpp continue cleaning up include files based on IWYU 2019-07-02 15:10:52 -04:00
npair_skip_size_off2on_oneside.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
nstencil.cpp move enum{NSQ,BIN,MULTI} to the Neighbor class in neighbor.h 2018-05-09 23:46:09 -04:00
nstencil.h USER-DPD: SSA with Kokkos: make stencil's sx, sy, sz variables public 2017-02-22 15:08:21 -05:00
nstencil_full_bin_2d.cpp continue cleaning up include files based on IWYU 2019-07-02 15:10:52 -04:00
nstencil_full_bin_2d.h major neighbor list style whitespace cleanup 2017-05-30 17:04:48 -04:00
nstencil_full_bin_3d.cpp continue cleaning up include files based on IWYU 2019-07-02 15:10:52 -04:00
nstencil_full_bin_3d.h major neighbor list style whitespace cleanup 2017-05-30 17:04:48 -04:00
nstencil_full_ghost_bin_2d.cpp continue cleaning up include files based on IWYU 2019-07-02 15:10:52 -04:00
nstencil_full_ghost_bin_2d.h major neighbor list style whitespace cleanup 2017-05-30 17:04:48 -04:00
nstencil_full_ghost_bin_3d.cpp continue cleaning up include files based on IWYU 2019-07-02 15:10:52 -04:00
nstencil_full_ghost_bin_3d.h major neighbor list style whitespace cleanup 2017-05-30 17:04:48 -04:00
nstencil_full_multi_2d.cpp continue cleaning up include files based on IWYU 2019-07-02 15:10:52 -04:00
nstencil_full_multi_2d.h major neighbor list style whitespace cleanup 2017-05-30 17:04:48 -04:00
nstencil_full_multi_3d.cpp continue cleaning up include files based on IWYU 2019-07-02 15:10:52 -04:00
nstencil_full_multi_3d.h
nstencil_half_bin_2d_newtoff.cpp continue cleaning up include files based on IWYU 2019-07-02 15:10:52 -04:00
nstencil_half_bin_2d_newtoff.h
nstencil_half_bin_2d_newton.cpp continue cleaning up include files based on IWYU 2019-07-02 15:10:52 -04:00
nstencil_half_bin_2d_newton.h
nstencil_half_bin_2d_newton_tri.cpp continue cleaning up include files based on IWYU 2019-07-02 15:10:52 -04:00
nstencil_half_bin_2d_newton_tri.h
nstencil_half_bin_3d_newtoff.cpp continue cleaning up include files based on IWYU 2019-07-02 15:10:52 -04:00
nstencil_half_bin_3d_newtoff.h
nstencil_half_bin_3d_newton.cpp continue cleaning up include files based on IWYU 2019-07-02 15:10:52 -04:00
nstencil_half_bin_3d_newton.h
nstencil_half_bin_3d_newton_tri.cpp continue cleaning up include files based on IWYU 2019-07-02 15:10:52 -04:00
nstencil_half_bin_3d_newton_tri.h
nstencil_half_ghost_bin_2d_newtoff.cpp continue cleaning up include files based on IWYU 2019-07-02 15:10:52 -04:00
nstencil_half_ghost_bin_2d_newtoff.h major neighbor list style whitespace cleanup 2017-05-30 17:04:48 -04:00
nstencil_half_ghost_bin_3d_newtoff.cpp continue cleaning up include files based on IWYU 2019-07-02 15:10:52 -04:00
nstencil_half_ghost_bin_3d_newtoff.h
nstencil_half_multi_2d_newtoff.cpp continue cleaning up include files based on IWYU 2019-07-02 15:10:52 -04:00
nstencil_half_multi_2d_newtoff.h
nstencil_half_multi_2d_newton.cpp continue cleaning up include files based on IWYU 2019-07-02 15:10:52 -04:00
nstencil_half_multi_2d_newton.h
nstencil_half_multi_2d_newton_tri.cpp continue cleaning up include files based on IWYU 2019-07-02 15:10:52 -04:00
nstencil_half_multi_2d_newton_tri.h
nstencil_half_multi_3d_newtoff.cpp continue cleaning up include files based on IWYU 2019-07-02 15:10:52 -04:00
nstencil_half_multi_3d_newtoff.h
nstencil_half_multi_3d_newton.cpp continue cleaning up include files based on IWYU 2019-07-02 15:10:52 -04:00
nstencil_half_multi_3d_newton.h
nstencil_half_multi_3d_newton_tri.cpp continue cleaning up include files based on IWYU 2019-07-02 15:10:52 -04:00
nstencil_half_multi_3d_newton_tri.h
ntopo.cpp put implementation header first for all remaining main folder source files 2019-07-03 19:34:13 -04:00
ntopo.h move enum{IGNORE,WARN,ERROR) into Thermo class and use Thermo:: namespace to reference it 2018-05-09 18:11:31 -04:00
ntopo_angle_all.cpp put implementation header first for all remaining main folder source files 2019-07-03 19:34:13 -04:00
ntopo_angle_all.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
ntopo_angle_partial.cpp put implementation header first for all remaining main folder source files 2019-07-03 19:34:13 -04:00
ntopo_angle_partial.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
ntopo_angle_template.cpp put implementation header first for all remaining main folder source files 2019-07-03 19:34:13 -04:00
ntopo_angle_template.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
ntopo_bond_all.cpp put implementation header first for all remaining main folder source files 2019-07-03 19:34:13 -04:00
ntopo_bond_all.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
ntopo_bond_partial.cpp put implementation header first for all remaining main folder source files 2019-07-03 19:34:13 -04:00
ntopo_bond_partial.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
ntopo_bond_template.cpp put implementation header first for all remaining main folder source files 2019-07-03 19:34:13 -04:00
ntopo_bond_template.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
ntopo_dihedral_all.cpp put implementation header first for all remaining main folder source files 2019-07-03 19:34:13 -04:00
ntopo_dihedral_all.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
ntopo_dihedral_partial.cpp put implementation header first for all remaining main folder source files 2019-07-03 19:34:13 -04:00
ntopo_dihedral_partial.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
ntopo_dihedral_template.cpp put implementation header first for all remaining main folder source files 2019-07-03 19:34:13 -04:00
ntopo_dihedral_template.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
ntopo_improper_all.cpp put implementation header first for all remaining main folder source files 2019-07-03 19:34:13 -04:00
ntopo_improper_all.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
ntopo_improper_partial.cpp put implementation header first for all remaining main folder source files 2019-07-03 19:34:13 -04:00
ntopo_improper_partial.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
ntopo_improper_template.cpp put implementation header first for all remaining main folder source files 2019-07-03 19:34:13 -04:00
ntopo_improper_template.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
output.cpp put implementation header first for all remaining main folder source files 2019-07-03 19:34:13 -04:00
output.h update manual and headers for updated error message 2019-04-08 07:16:22 -04:00
pack.h more changes to doc pages and CMakeLists.txt 2018-08-14 15:44:25 -06:00
pair.cpp print warning when using pair_write on EAM pair style 2020-01-16 16:51:32 -05:00
pair.h merged in current master 2020-01-13 10:34:31 -07:00
pair_beck.cpp merged in current master 2020-01-13 10:34:31 -07:00
pair_beck.h
pair_born.cpp merged in current master 2020-01-13 10:34:31 -07:00
pair_born.h
pair_born_coul_dsf.cpp merged in current master 2020-01-13 10:34:31 -07:00
pair_born_coul_dsf.h
pair_born_coul_wolf.cpp merged in current master 2020-01-13 10:34:31 -07:00
pair_born_coul_wolf.h
pair_buck.cpp merged in current master 2020-01-13 10:34:31 -07:00
pair_buck.h
pair_buck_coul_cut.cpp merged in current master 2020-01-13 10:34:31 -07:00
pair_buck_coul_cut.h
pair_coul_cut.cpp merged in current master 2020-01-13 10:34:31 -07:00
pair_coul_cut.h
pair_coul_debye.cpp merged in current master 2020-01-13 10:34:31 -07:00
pair_coul_debye.h
pair_coul_dsf.cpp merged in current master 2020-01-13 10:34:31 -07:00
pair_coul_dsf.h
pair_coul_streitz.cpp put implementation header first for all remaining main folder source files 2019-07-03 19:34:13 -04:00
pair_coul_streitz.h initialize cut_respa to NULL in constructor to avoid uninitialized access 2020-02-14 15:51:38 -05:00
pair_coul_wolf.cpp merged in current master 2020-01-13 10:34:31 -07:00
pair_coul_wolf.h
pair_deprecated.cpp put implementation header first for all remaining main folder source files 2019-07-03 19:34:13 -04:00
pair_deprecated.h add reax to DEPRECATED pair style and state when it was removed from LAMMPS 2018-12-10 12:11:56 -05:00
pair_dpd.cpp merged in current master 2020-01-13 10:34:31 -07:00
pair_dpd.h
pair_dpd_tstat.cpp merged in current master 2020-01-13 10:34:31 -07:00
pair_dpd_tstat.h
pair_gauss.cpp merged in current master 2020-01-13 10:34:31 -07:00
pair_gauss.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
pair_hybrid.cpp must try suffixes when recreating pair hybrid substyles from a restart 2020-03-11 08:45:35 -04:00
pair_hybrid.h merged in current master 2020-01-13 10:34:31 -07:00
pair_hybrid_overlay.cpp separate out svector handling to new virtual functions, so it can be handled differently for pair styles hybrid and hybrid/overlay 2019-09-12 12:30:22 -04:00
pair_hybrid_overlay.h separate out svector handling to new virtual functions, so it can be handled differently for pair styles hybrid and hybrid/overlay 2019-09-12 12:30:22 -04:00
pair_lj96_cut.cpp initialize cut_respa to NULL in constructor to avoid uninitialized access 2020-02-14 15:51:38 -05:00
pair_lj96_cut.h Moved some stuff around. 2017-10-26 12:25:55 -04:00
pair_lj_cubic.cpp merged in current master 2020-01-13 10:34:31 -07:00
pair_lj_cubic.h
pair_lj_cut.cpp merged in current master 2020-01-13 10:34:31 -07:00
pair_lj_cut.h Moved some stuff around. 2017-10-26 12:25:55 -04:00
pair_lj_cut_coul_cut.cpp merged in current master 2020-01-13 10:34:31 -07:00
pair_lj_cut_coul_cut.h
pair_lj_cut_coul_debye.cpp merged in current master 2020-01-13 10:34:31 -07:00
pair_lj_cut_coul_debye.h
pair_lj_cut_coul_dsf.cpp merged in current master 2020-01-13 10:34:31 -07:00
pair_lj_cut_coul_dsf.h
pair_lj_cut_coul_wolf.cpp merged in current master 2020-01-13 10:34:31 -07:00
pair_lj_cut_coul_wolf.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
pair_lj_expand.cpp merged in current master 2020-01-13 10:34:31 -07:00
pair_lj_expand.h
pair_lj_gromacs.cpp merged in current master 2020-01-13 10:34:31 -07:00
pair_lj_gromacs.h
pair_lj_gromacs_coul_gromacs.cpp merged in current master 2020-01-13 10:34:31 -07:00
pair_lj_gromacs_coul_gromacs.h
pair_lj_smooth.cpp merged in current master 2020-01-13 10:34:31 -07:00
pair_lj_smooth.h
pair_lj_smooth_linear.cpp merged in current master 2020-01-13 10:34:31 -07:00
pair_lj_smooth_linear.h rename single2nd => single_hessian 2019-07-01 20:44:03 -04:00
pair_mie_cut.cpp initialize cut_respa to NULL in constructor to avoid uninitialized access 2020-02-14 15:51:38 -05:00
pair_mie_cut.h Moved some stuff around. 2017-10-26 12:25:55 -04:00
pair_morse.cpp merged in current master 2020-01-13 10:34:31 -07:00
pair_morse.h remove trailing whitespace 2018-03-16 12:37:27 -04:00
pair_soft.cpp merged in current master 2020-01-13 10:34:31 -07:00
pair_soft.h
pair_table.cpp merged in current master 2020-01-13 10:34:31 -07:00
pair_table.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
pair_ufm.cpp merged in current master 2020-01-13 10:34:31 -07:00
pair_ufm.h whitespace cleanup 2018-03-15 21:57:45 -04:00
pair_yukawa.cpp merged in current master 2020-01-13 10:34:31 -07:00
pair_yukawa.h Undid the removal of rad in pair_yukawa. 2017-11-17 15:07:59 -05:00
pair_zbl.cpp continuing to clean up include file lists 2019-07-04 08:39:17 -04:00
pair_zbl.h Add Kokkos versions of pair_style snap and zbl 2018-01-09 17:03:49 -07:00
pair_zero.cpp merged in current master 2020-01-13 10:34:31 -07:00
pair_zero.h Fix typo 2020-03-14 13:57:48 +09:00
pointers.h put implementation header first to avoid issues with mpi.h and lmptype.h with OpenMPI 2019-07-03 06:16:16 -04:00
procmap.cpp Merge branch 'master' into improve-include-consistency 2019-07-19 17:57:58 -04:00
procmap.h
random_mars.cpp reset array size since we don't use the last element anymore 2020-01-31 09:59:35 -05:00
random_mars.h modified versions of creating atoms on subset of lattice, ditto for set type/fraction 2020-01-21 13:31:47 -07:00
random_park.cpp put implementation header first for all remaining main folder source files 2019-07-03 19:34:13 -04:00
random_park.h
rcb.cpp Merge pull request #1542 from akohlmey/improve-include-consistency 2019-07-29 20:12:41 -04:00
rcb.h no need to include mpi.h in headers that include pointers.h (directly or indirectly) 2019-08-13 11:04:13 -04:00
read_data.cpp capitalize comment 2020-01-21 17:57:12 -07:00
read_data.h bulk removal of #include <cstdio> from header files 2019-06-27 21:54:07 -04:00
read_dump.cpp change isReaderParallel flag to parallel and generally adapt more to LAMMPS programming style 2020-01-20 09:20:42 -05:00
read_dump.h change isReaderParallel flag to parallel and generally adapt more to LAMMPS programming style 2020-01-20 09:20:42 -05:00
read_restart.cpp rename lmp_restart.h to lmprestart.h to avoid confusing it with lmp_<machine> files 2020-01-31 11:18:08 -05:00
read_restart.h multiple consistency improvements for restart files 2020-01-31 10:49:59 -05:00
reader.cpp Merge branch 'master' into improve-include-consistency 2019-07-09 14:50:00 -04:00
reader.h Added the boxinfo argument 2019-07-08 17:25:23 -06:00
reader_native.cpp we need more specific matches to correctly handle TIME and TIMESTEP items 2020-02-14 16:07:34 -05:00
reader_native.h Added the boxinfo argument 2019-07-08 17:25:23 -06:00
reader_xyz.cpp Merge branch 'master' into improve-include-consistency 2019-07-19 17:57:58 -04:00
reader_xyz.h Added the boxinfo argument 2019-07-08 17:25:23 -06:00
region.cpp continuing to clean up include file lists 2019-07-04 08:39:17 -04:00
region.h minor tweaks to already processed files 2019-07-08 16:22:55 -04:00
region_block.cpp continuing to clean up include file lists 2019-07-04 08:39:17 -04:00
region_block.h
region_cone.cpp continuing to clean up include file lists 2019-07-04 08:39:17 -04:00
region_cone.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
region_cylinder.cpp continuing to clean up include file lists 2019-07-04 08:39:17 -04:00
region_cylinder.h support variables for more region properties 2018-12-13 14:06:12 -05:00
region_deprecated.cpp put implementation header first for all remaining main folder source files 2019-07-03 19:34:13 -04:00
region_deprecated.h add deprecated dump and region styles 2018-10-17 18:13:12 -04:00
region_intersect.cpp continuing to clean up include file lists 2019-07-04 08:39:17 -04:00
region_intersect.h
region_plane.cpp continuing to clean up include file lists 2019-07-04 08:39:17 -04:00
region_plane.h
region_prism.cpp continuing to clean up include file lists 2019-07-04 08:39:17 -04:00
region_prism.h
region_sphere.cpp continuing to clean up include file lists 2019-07-04 08:39:17 -04:00
region_sphere.h support variables for more region properties 2018-12-13 14:06:12 -05:00
region_union.cpp continuing to clean up include file lists 2019-07-04 08:39:17 -04:00
region_union.h
replicate.cpp remove trailing whitespace 2020-01-21 15:46:28 -05:00
replicate.h
rerun.cpp continuing to clean up include file lists 2019-07-04 08:39:17 -04:00
rerun.h
reset_ids.cpp Fix typo 2020-03-14 13:57:48 +09:00
reset_ids.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
respa.cpp continuing to clean up include file lists 2019-07-04 08:39:17 -04:00
respa.h default arguments on polymorph/pure methods can lead to unexpected overloading in derived classes 2018-02-22 07:53:58 -05:00
run.cpp continuing to clean up include file lists 2019-07-04 08:39:17 -04:00
run.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
set.cpp fix typo in comment 2020-02-14 18:29:11 -05:00
set.h modified versions of creating atoms on subset of lattice, ditto for set type/fraction 2020-01-21 13:31:47 -07:00
special.cpp starting to work on includes in USER-OMP 2019-07-11 22:12:01 -04:00
special.h remove trailing whitespace 2019-03-26 11:17:21 -04:00
suffix.h Increase portability to more C++ compilers 2020-02-14 13:40:31 -05:00
thermo.cpp Merge branch 'master' into improve-include-consistency 2019-07-09 14:50:00 -04:00
thermo.h continuing to clean up include file lists 2019-07-04 08:39:17 -04:00
timer.cpp minor tweaks to already processed files 2019-07-08 16:22:55 -04:00
timer.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
universe.cpp Merge branch 'master' into improve-include-consistency 2019-07-19 17:57:58 -04:00
universe.h bulk removal of #include <cstdio> from header files 2019-06-27 21:54:07 -04:00
update.cpp merged in current master 2020-01-13 10:34:31 -07:00
update.h Add Kokkos version of minimize 2019-08-28 09:41:15 -06:00
utils.cpp remove unused and broken function 2020-03-18 15:38:29 -04:00
utils.h remove unused and broken function 2020-03-18 15:38:29 -04:00
variable.cpp avoid segmentation faults in universe/uloop variable increment 2020-03-25 08:19:24 -04:00
variable.h bulk removal of #include <cstdio> from header files 2019-06-27 21:54:07 -04:00
velocity.cpp one more chunk of files in src folder to be cleaned up 2019-07-05 14:43:20 -04:00
velocity.h add placeholders to include files for error messges 2018-04-03 17:48:31 -06:00
verlet.cpp one more chunk of files in src folder to be cleaned up 2019-07-05 14:43:20 -04:00
verlet.h default arguments on polymorph/pure methods can lead to unexpected overloading in derived classes 2018-02-22 07:53:58 -05:00
version.h step version string for next patch release 2020-03-18 17:18:46 -04:00
write_coeff.cpp one more chunk of files in src folder to be cleaned up 2019-07-05 14:43:20 -04:00
write_coeff.h bulk removal of #include <cstdio> from header files 2019-06-27 21:54:07 -04:00
write_data.cpp one more chunk of files in src folder to be cleaned up 2019-07-05 14:43:20 -04:00
write_data.h bulk removal of #include <cstdio> from header files 2019-06-27 21:54:07 -04:00
write_dump.cpp one more chunk of files in src folder to be cleaned up 2019-07-05 14:43:20 -04:00
write_dump.h update manual and headers for updated error message 2019-04-08 07:16:22 -04:00
write_restart.cpp Merge branch 'master' into restart-consistency 2020-03-18 20:30:00 -04:00
write_restart.h bulk removal of #include <cstdio> from header files 2019-06-27 21:54:07 -04:00