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15216 Commits

Author SHA1 Message Date
Steven J. Plimpton f8faf4dfe2 cosmetic tweak to Howto page 2018-08-20 13:50:55 -06:00
Richard Berger 703a795af8 Modify Howto and Tools 
- add missing TOCs in Howto section
- limit section numbering to maximum of 3 levels
- add "Tool descriptions" header
 2018-08-20 01:50:16 -04:00
Steven J. Plimpton 5436169c20 change format of Howto and Tools doc pages 2018-08-17 09:20:44 -06:00
Steve Plimpton 6c5d339a94
Merge pull request #1060 from rbberger/doc-fixes 
Rename Run.txt to Run_head.txt to avoid file name clash on OSX
 2018-08-17 08:51:11 -06:00
Richard Berger c0544ba346 Actually rename the file 2018-08-17 10:34:17 -04:00
Richard Berger eb7568a4fb Fixes issue #1058 2018-08-17 10:13:19 -04:00
Steve Plimpton 2a547ede68
Merge pull request #1059 from rbberger/cmake_fixes 
Add missing source file for KOKKOS with KSPACE
 2018-08-17 06:49:04 -06:00
Richard Berger 4c3bd3909e Add missing source file for KOKKOS with KSPACE 2018-08-16 18:49:45 -04:00
Steven J. Plimpton b7d64e0374 patch 16Aug18 2018-08-16 11:55:57 -06:00
Steve Plimpton 8c0c6659e4
Merge pull request #1056 from lammps/doc-tweak 
tweaks to Manual formatting
 2018-08-16 11:43:46 -06:00
Richard Berger 47f02b323a Undo change, would create inconsistent tocs 2018-08-16 12:39:48 -04:00
Richard Berger 3f15353616 Merge remote-tracking branch 'origin/master' into doc-tweak 2018-08-16 12:27:52 -04:00
Steven J. Plimpton b55f3162f4 date got lost somehow 2018-08-16 09:41:04 -06:00
Steven J. Plimpton 17e5da978b Merge branch 'master' of github.com:lammps/lammps 2018-08-16 09:32:12 -06:00
Steve Plimpton 34b9b44cb6
Merge pull request #1057 from junghans/cmake_fixes 
cmake: convert FFT and INTEL_ARCH
 2018-08-16 09:31:58 -06:00
Steven J. Plimpton 8cea92d0bd few more formatting issues 2018-08-16 09:24:55 -06:00
Christoph Junghans 481924fccc
Update CMakeLists.txt 2018-08-16 05:50:10 -06:00
Christoph Junghans 71227cb3c6 cmake: convert INTEL_ARCH to upper 2018-08-15 18:06:41 -06:00
Christoph Junghans 2137668c35 cmake: convert FFT and INTEL_ARCH 2018-08-15 16:30:21 -06:00
Steven J. Plimpton 07cd194e27 tweaks to Manual formatting 2018-08-15 16:27:39 -06:00
Steven J. Plimpton ccc9fcda77 tweaks to doc page formatting 2018-08-15 16:22:26 -06:00
Steve Plimpton ccacf0d4bb
Merge pull request #1048 from lammps/doc-reorg-start 
Documentation Refactoring: Section Start
 2018-08-15 15:25:17 -06:00
Steve Plimpton 6cc653f631
Merge pull request #1055 from rbberger/temporary_qsort_v_mergesort_bugfix 
favor qsort over mergesort for stable release
 2018-08-15 15:14:43 -06:00
Steven J. Plimpton 46f1e63a19 update to Authors for CMake addition 2018-08-15 15:14:01 -06:00
Steven J. Plimpton 9e154abba0 remove pre-install of 3 default packages from docs 2018-08-15 14:55:48 -06:00
Richard Berger 6069d392a3 favor qsort over mergesort for stable release 2018-08-15 16:44:31 -04:00
Steve Plimpton e541074697
Merge pull request #1050 from rbberger/fix_shared_lib_voro_build 
Generate Position Independent Code in ExternalProject Voro when necessary
 2018-08-15 14:01:08 -06:00
Steven J. Plimpton c9131cf1de drop FFTW2 support, and change doc pages 2018-08-15 13:54:37 -06:00
Richard Berger b9e2b26b65 Simplified change 2018-08-15 12:22:06 -04:00
Richard Berger 023c8e5d6e Correct option values to lower case in README.md 2018-08-15 11:31:22 -04:00
Richard Berger 1776ade72e Update CMake README.md 2018-08-15 11:23:02 -04:00
Richard Berger 3bb8fefb12 Little tweak to error message 2018-08-15 10:57:45 -04:00
Richard Berger 60c9477e96 Add option validation and remove extra variables in CMakeLists.txt 2018-08-15 10:50:51 -04:00
Steven J. Plimpton 95bfc3b536 one more entry to lammps.book 2018-08-15 07:54:17 -06:00
Steven J. Plimpton 1823fc2bd1 commands.txt -> commands_list.txt to avoid conflict with Commands.txt 2018-08-15 07:50:10 -06:00
Steven J. Plimpton 6eededb190 one more tweak 2018-08-15 07:45:52 -06:00
Steven J. Plimpton 6c90410260 one more file I forgot to commit 2018-08-15 07:44:36 -06:00
Steven J. Plimpton 1f65150e16 60 -> sm_60 for GPU_ARCH 2018-08-15 07:34:20 -06:00
Steven J. Plimpton 9c3748e07c change Python.txt to Python_head.txt, adapt GPU package syntax 2018-08-15 07:31:31 -06:00
Richard Berger ad9126f30e Kokkos bugfix for building with cmake 2018-08-14 22:19:20 -04:00
Richard Berger b72048097c Correct Build_settings.txt 2018-08-14 22:17:40 -04:00
Richard Berger 9526db44ce Fix lammps.book and broken link 2018-08-14 22:10:08 -04:00
Steven J. Plimpton 63f57bbece small tweak on USER-INTEL section 2018-08-14 16:07:04 -06:00
Steven J. Plimpton 7ec52784cb more changes to doc pages and CMakeLists.txt 2018-08-14 15:44:25 -06:00
Richard Berger 64d539d9d2 Disable sin/cos check in CMakeLists.txt since it breaks KOKKOS CUDA support 2018-08-14 11:56:57 -04:00
Richard Berger 7ab11488d0 Added brief discussion on how to use presets files with CMake 2018-08-14 11:51:37 -04:00
Richard Berger 3384c683df Correct FFT_PACK in CMakeLists.txt 2018-08-14 11:41:22 -04:00
Richard Berger 13bb02b100 Updated CMake build for USER-INTEL 
- Removed differences between MAKE/OPTIONS/Makefile.intel_cpu/coprocessor and
  CMake compilation and added INTEL_ARCH to select between CPU and KNL.
- Added some sanity checks for requirements
- Added FindTBB
 2018-08-13 19:58:54 -04:00
Richard Berger afbfaf0a8f Change LAMMPS_SIZE_LIMIT to LAMMPS_SIZES and use lower case values 2018-08-13 15:53:50 -04:00
Richard Berger 8634301b53 Limit depth of howto tocs 2018-08-13 11:48:32 -04:00