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89 Commits

Author SHA1 Message Date
Axel Kohlmeyer e7a37877c0
apply changes to doc Makefile to limit the impact of SNL network config changes 2021-02-16 11:40:25 -05:00
Axel Kohlmeyer a83fe46860
spelling target needs conf.py 2021-02-01 20:32:19 -05:00
Axel Kohlmeyer 2b44d67128
consistent dependencies for targes in "doc" folder makefile 2021-02-01 18:13:00 -05:00
Axel Kohlmeyer 6ac481409a
remove temporary flag for using the new pip resolver which is now the default 2020-12-01 19:04:43 -05:00
Axel Kohlmeyer 9a3f935c9b
do not include polyfill.js anymore 2020-10-27 20:17:59 -04:00
Axel Kohlmeyer 60864f021f
replace "doc page" with "page" or equivalent 2020-10-07 22:29:26 -04:00
Axel Kohlmeyer 2f8a5ddd1f
xindy doesn't seem to be required (and is not available on CentOS 8) 2020-09-23 17:13:09 -04:00
Axel Kohlmeyer 92f8398bed
check more thoroughly for prerequisites to translate the PDF manual. update doc/README 2020-09-19 18:16:52 -04:00
Axel Kohlmeyer 6b0346c299
try use unencrypted download or using wget if normal download of polyfill.js fails 2020-09-19 16:14:08 -04:00
Axel Kohlmeyer 9030c987e6
tweak formatting and style setting to have the desired structure and layout 2020-09-19 00:54:54 -04:00
Axel Kohlmeyer b520a6287b
Revert parts of "Restore PDF index" 
We need to update the container image(s) for building the
pdf documentation on ci.lammps.org by adding `latexmk`
and `xindy` before we can re-enable this change to the makefile.

This partially reverts commit 3c3b76a781.
 2020-09-18 18:37:26 -04:00
Richard Berger 3c3b76a781
Restore PDF index 2020-09-18 17:51:51 -04:00
Axel Kohlmeyer 4c5aedeaa0
fix typo 2020-09-17 12:50:53 -04:00
Axel Kohlmeyer 91eaaba1be
improve portability of docs makefile 
- detect if /bin/bash is not found and provide a suitable error message
- use $(MAKE) and $(MFLAGS) variables to handle cases where GNU make is not called "make"
 2020-09-17 12:40:09 -04:00
Axel Kohlmeyer 3d37fd05f4
disable caching - for now - to avoid bad side effects from sphinx-tabs 2020-09-10 16:14:18 -04:00
Axel Kohlmeyer f8495975d3
transfer the rest of the Developer guide and remove the .tex versions and references to it 2020-08-28 10:52:45 -04:00
Richard Berger c256f2331f
JPG folder is no longer needed in HTML output 2020-08-25 16:59:39 -04:00
Richard Berger df8fb26272
Refactor changes to documentation build 
- Added CMake variables for readability
- Moved Mathjax files to _static to avoid special copy logic
- Moved JPG/lammps-logo.png to _static to avoid special copy logic
- Removed dead CMake code
 2020-08-25 13:41:31 -04:00
Axel Kohlmeyer 3f685c346f
add doxygen integration with conventional and cmake doc build 2020-08-24 17:58:37 -04:00
Axel Kohlmeyer 265b7cf11c
use new dependency resolver in pip for the documentation build virtual environment 2020-08-11 14:11:44 -04:00
Richard Berger 437ff2742d
Update lammps_theme (based on latest sphinx_rtd_theme) 2020-07-21 12:44:10 -04:00
Axel Kohlmeyer 34689fed5e
make clean-all should also remove Manual.pdf and Developer.pdf 2020-04-13 23:34:29 -04:00
Axel Kohlmeyer 1688160669
don't need to force version 2.4.4 of sphinx anymore 2020-04-13 22:55:20 -04:00
Axel Kohlmeyer 20edc12821
copy images from figure rst directives as well 2020-04-11 11:53:55 -04:00
Axel Kohlmeyer 592a5fac53
fix bugs in doc makefile 2020-04-05 21:56:55 -04:00
Axel Kohlmeyer 97b11ea746
enforce using sphinx version 2.4.4, install spellchecker with all other sphinx tools 2020-04-05 21:36:06 -04:00
Axel Kohlmeyer a9dad3d46c
test for PDFLaTeX and update README 2020-04-02 14:31:47 -04:00
Axel Kohlmeyer fb9b5c6dd0
remove command copying (the now removed) doc/src/USER into some output folders 2020-03-19 15:55:05 -04:00
Axel Kohlmeyer 8546bb51bf
Layout images so they show up side-by-side in html and pdf and adapt to screen/paper size 2020-03-11 10:18:48 -04:00
Axel Kohlmeyer 3c277409c2
switch parsed-literal to code-block in Howto files where applicable 2020-02-27 12:45:14 -05:00
Axel Kohlmeyer 3563d2f10d
remove references to html-offline and only produce the offline viewable html manual 2020-02-26 16:01:03 -05:00
Axel Kohlmeyer ca650ba43f
add some missing dependencies 2020-02-22 13:49:57 -05:00
Axel Kohlmeyer e8d1288527
added script to check for missing packages in package tables in manual 2020-02-22 11:46:31 -05:00
Axel Kohlmeyer 60cb4416f0
add ability to build an offline viewable html format manual in html-offline 2020-02-22 02:27:18 -05:00
Axel Kohlmeyer 002fff95c6
copy large target image files only once 2020-02-11 11:07:55 +01:00
Axel Kohlmeyer c8034d19c4
fix up remaining computes for embedded math and a few other issues 2020-02-10 16:21:19 -05:00
Axel Kohlmeyer fa4d9ff0d8
remove automatic translation of .txt to .rst and references to txt folder 2020-01-23 16:56:41 -05:00
Axel Kohlmeyer 204fb6f7ed
fix issue with standalone anchor_check 2020-01-22 23:51:53 -05:00
Axel Kohlmeyer 64e72b1cd5
indent consistently with tabs only 2020-01-12 12:34:54 -05:00
Axel Kohlmeyer 26830d09f8
hook style check into makefile 2020-01-11 20:39:58 -05:00
Richard Berger 81e92de838 Fix doc Makefile 2019-11-07 21:47:29 -05:00
Richard Berger 74dade3ccb Change doc folder src -> txt, rst -> src 2019-11-05 15:27:21 -05:00
Richard Berger 12cb19090a Remove txt2html and htmldoc from doc build 2019-11-02 23:07:49 -04:00
Richard Berger aeaa289d1d Merge branch 'master' into docs_to_rst_migration 2019-11-02 22:57:43 -04:00
Axel Kohlmeyer a5db0463ec
list lines in doc source files with non-ASCII characters 2019-09-25 13:36:57 -04:00
Richard Berger ddab4eeb1a Remove SHA1 utility used in doc Makefile 2019-08-22 14:11:32 -06:00
Richard Berger 574e4067dc Add documentation files in RST format 
This is the first step for moving the documentation format from *.txt to the
*.rst format.

In the last years we've been automatically converting txt files from Steve's
markup into RST to generate the documentation pages via Sphinx. The decision
has now been made to fully migrate to RST and avoid the conversion in the
future.

This will enable us to fully use RST and Sphinx to improve the documentation.

For the intermediate period, while there are still pending PRs with
documentation changes, we will keep both source files and update the RST files
accordingly.
 2019-08-22 14:11:32 -06:00
Axel Kohlmeyer 50082c287d
sphinxcontrib-spelling has been updated for Sphinx 2.x. remove enforcing to use old version 2019-05-18 15:41:38 -04:00
Axel Kohlmeyer 30bca9f91e
force loading of Sphinx version 1.7.6 instead of 2.0.0 or later, so the spellchecker keeps working 2019-03-28 16:20:19 -04:00
Axel Kohlmeyer 4e74ccbbbe
restore building developer pdf before manual pdf 2019-03-25 21:18:17 -04:00