Commit Graph

5206 Commits

Author SHA1 Message Date
sjplimp 3f5513cc1e git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8529 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-08-06 20:48:48 +00:00
sjplimp 32a9b0b92c git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8527 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-08-04 20:43:35 +00:00
sjplimp bb9541993c git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8526 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-08-04 19:30:28 +00:00
pscrozi c4f8d2d110 Analytic differentiation (AD) for PPPM.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8525 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2012-08-02 18:40:46 +00:00
pscrozi d33a0604e2 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8524 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-08-02 17:59:22 +00:00
pscrozi adc385d450 Need more samples in order to get a non-zero timing for kspace FFT flops calculation. Boosting from 5 to 1000.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8523 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2012-08-02 17:12:44 +00:00
pscrozi ec87f00bff git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8522 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-08-01 15:19:19 +00:00
sjplimp c579294b09 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8520 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-07-31 23:51:17 +00:00
sjplimp c3f93644ac git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8519 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-07-31 23:47:56 +00:00
athomps 4ec21d8ca8 Added reax/c array allocation keywords
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8518 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2012-07-31 23:08:39 +00:00
athomps 6f67e5cf3e Added reax/c array allocation keywords
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8517 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2012-07-31 23:08:02 +00:00
pscrozi 3d999ea9fa git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8516 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-07-31 21:55:36 +00:00
pscrozi 37d905578c Adding a domain remap after doing an MC particle move. This fixes a bug that shows up when an MC particle move moves a particle through the PBC.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8515 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2012-07-31 17:55:48 +00:00
sjplimp 311d2b0a0c git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8514 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-07-30 13:59:32 +00:00
sjplimp 601fb2f9a1 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8512 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-07-25 16:59:27 +00:00
sjplimp c07472d404 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8503 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-07-25 15:37:51 +00:00
sjplimp 052e83334e git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8502 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-07-25 15:37:36 +00:00
sjplimp 6bfa697ae2 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8500 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-07-25 15:18:55 +00:00
sjplimp 52eba645ca git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8499 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-07-25 15:17:24 +00:00
sjplimp 47552d4033 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8498 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-07-25 15:16:20 +00:00
sjplimp 912cfaca75 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8497 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-07-25 15:15:41 +00:00
sjplimp 5e52200ad3 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8496 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-07-24 23:14:32 +00:00
sjplimp 93f70b4f0a git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8495 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-07-24 23:08:02 +00:00
sjplimp 5cd1f06da6 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8494 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-07-24 22:58:10 +00:00
sjplimp 66f14edf60 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8493 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-07-24 18:33:34 +00:00
sjplimp 3d59bf0166 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8492 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-07-24 18:33:20 +00:00
sjplimp 35e3d38972 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8491 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-07-24 15:15:48 +00:00
sjplimp 8b62babddd git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8490 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-07-24 14:55:49 +00:00
sjplimp 0d1ef8e3be git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8489 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-07-16 16:22:16 +00:00
sjplimp e81f2934e0 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8488 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-07-16 16:18:09 +00:00
athomps 0505a48409 Added note on triclinic deformations and skew
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8485 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2012-07-16 15:32:31 +00:00
athomps 95e51c0cda Added DELTATILT to box skew check
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8484 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2012-07-10 20:32:47 +00:00
pscrozi 98977d765c Backing out recent changes (8479, 8480, and 8482) where 2 FFT version of PPPM was added.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8483 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2012-07-09 16:50:38 +00:00
pscrozi cf16cc1dd2 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8482 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-07-07 17:46:24 +00:00
pscrozi 65a4122ac3 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8481 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-07-05 23:15:09 +00:00
pscrozi 193e63f443 Updating pppm_cuda.cpp to correspond with recent PPPM changes.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8480 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2012-07-05 23:04:02 +00:00
pscrozi aa27b1b646 Adding in 2 FFT version of PPPM for better scaling. This also includes some modifications to the 4 FFT version of PPPM causing the PPPM initialization to run slower, but loop time is essentially the same.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8479 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2012-07-05 23:03:04 +00:00
pscrozi eeeb01316d Changing variable name so that it isn't overloaded.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8478 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2012-07-05 21:57:29 +00:00
sjplimp 7a388da069 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8475 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-07-04 00:31:38 +00:00
athomps e86cb77378 Updated error message in fix nvt/npt/nph
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8474 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2012-07-03 23:19:41 +00:00
athomps 194d503cd3 Updated error message in fix nvt/npt/nph
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8473 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2012-07-03 23:10:18 +00:00
athomps c89a12ff71 Added tilt factor scaling and fixed-point features to fix box/relax
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8472 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2012-07-03 22:50:34 +00:00
athomps 959f12463b Added tilt factor scaling and fixed-point features to fix box/relax
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8471 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2012-07-03 22:49:40 +00:00
sjplimp f3404420e4 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8469 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-07-03 22:16:40 +00:00
pscrozi 5a6c205b6f Adding in a new slab option for Jeremy Templeton. Invoked by "kspace_modify slab nozforce", which runs slab mode with no long-range z forces.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8465 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2012-07-03 17:29:51 +00:00
pscrozi 4a0601f875 Adding in a new slab option for Jeremy Templeton. Invoked by "kspace_modify slab nozforce", which run slab mode with no long-range z forces.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8464 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2012-07-03 17:21:56 +00:00
pscrozi 56ca4db42c Improved rms force error estimate for coulomb tables. Now takes into consideration charge density, cutoff, number of atoms, etc.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8463 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2012-07-03 15:47:48 +00:00
sjplimp 93adc50c75 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8462 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-07-03 14:05:44 +00:00
sjplimp d2ced1abaa git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8460 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-07-02 14:40:07 +00:00
sjplimp 58f17efa4b git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8459 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-07-02 14:28:16 +00:00