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git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@9344 f3b2605a-c512-4ea7-a41b-209d697bcdaa

This commit is contained in:
sjplimp 2013-01-26 00:32:41 +00:00
parent d5de73bf98
commit e6164d65f2
4 changed files with 17 additions and 14 deletions
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2
doc/Section_commands.html
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@ -389,7 +389,7 @@ each style or click on the style itself for a full description:
<TR ALIGN="center"><TD ><A HREF = "compute_pe_atom.html">pe/atom</A></TD><TD ><A HREF = "compute_pressure.html">pressure</A></TD><TD ><A HREF = "compute_property_atom.html">property/atom</A></TD><TD ><A HREF = "compute_property_local.html">property/local</A></TD><TD ><A HREF = "compute_property_molecule.html">property/molecule</A></TD><TD ><A HREF = "compute_rdf.html">rdf</A></TD></TR> <TR ALIGN="center"><TD ><A HREF = "compute_pe_atom.html">pe/atom</A></TD><TD ><A HREF = "compute_pressure.html">pressure</A></TD><TD ><A HREF = "compute_property_atom.html">property/atom</A></TD><TD ><A HREF = "compute_property_local.html">property/local</A></TD><TD ><A HREF = "compute_property_molecule.html">property/molecule</A></TD><TD ><A HREF = "compute_rdf.html">rdf</A></TD></TR>
<TR ALIGN="center"><TD ><A HREF = "compute_reduce.html">reduce</A></TD><TD ><A HREF = "compute_reduce.html">reduce/region</A></TD><TD ><A HREF = "compute_slice.html">slice</A></TD><TD ><A HREF = "compute_stress_atom.html">stress/atom</A></TD><TD ><A HREF = "compute_temp.html">temp</A></TD><TD ><A HREF = "compute_temp_asphere.html">temp/asphere</A></TD></TR> <TR ALIGN="center"><TD ><A HREF = "compute_reduce.html">reduce</A></TD><TD ><A HREF = "compute_reduce.html">reduce/region</A></TD><TD ><A HREF = "compute_slice.html">slice</A></TD><TD ><A HREF = "compute_stress_atom.html">stress/atom</A></TD><TD ><A HREF = "compute_temp.html">temp</A></TD><TD ><A HREF = "compute_temp_asphere.html">temp/asphere</A></TD></TR>
<TR ALIGN="center"><TD ><A HREF = "compute_temp_com.html">temp/com</A></TD><TD ><A HREF = "compute_temp_deform.html">temp/deform</A></TD><TD ><A HREF = "compute_temp_partial.html">temp/partial</A></TD><TD ><A HREF = "compute_temp_profile.html">temp/profile</A></TD><TD ><A HREF = "compute_temp_ramp.html">temp/ramp</A></TD><TD ><A HREF = "compute_temp_region.html">temp/region</A></TD></TR> <TR ALIGN="center"><TD ><A HREF = "compute_temp_com.html">temp/com</A></TD><TD ><A HREF = "compute_temp_deform.html">temp/deform</A></TD><TD ><A HREF = "compute_temp_partial.html">temp/partial</A></TD><TD ><A HREF = "compute_temp_profile.html">temp/profile</A></TD><TD ><A HREF = "compute_temp_ramp.html">temp/ramp</A></TD><TD ><A HREF = "compute_temp_region.html">temp/region</A></TD></TR>
<TR ALIGN="center"><TD ><A HREF = "compute_temp_sphere.html">temp/sphere</A></TD><TD ><A HREF = "compute_ti.html">ti</A></TD><TD ><A HREF = "compute_coord_atom.html">voronoi/atom</A> <TR ALIGN="center"><TD ><A HREF = "compute_temp_sphere.html">temp/sphere</A></TD><TD ><A HREF = "compute_ti.html">ti</A></TD><TD ><A HREF = "compute_voronoi_atom.html">voronoi/atom</A>
</TD></TR></TABLE></DIV> </TD></TR></TABLE></DIV>
<P>These are compute styles contributed by users, which can be used if <P>These are compute styles contributed by users, which can be used if

2
doc/Section_commands.txt
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@ -595,7 +595,7 @@ each style or click on the style itself for a full description:
"temp/region"_compute_temp_region.html, "temp/region"_compute_temp_region.html,
"temp/sphere"_compute_temp_sphere.html, "temp/sphere"_compute_temp_sphere.html,
"ti"_compute_ti.html, "ti"_compute_ti.html,
"voronoi/atom"_compute_coord_atom.html :tb(c=6,ea=c) "voronoi/atom"_compute_voronoi_atom.html :tb(c=6,ea=c)
These are compute styles contributed by users, which can be used if These are compute styles contributed by users, which can be used if
"LAMMPS is built with the appropriate "LAMMPS is built with the appropriate

15
doc/read_data.html
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@ -571,10 +571,11 @@ section must be integers (1, not 1.0).
<LI>line syntax: atom-ID shapex shapey shapez quatw quati quatj quatk <LI>line syntax: atom-ID shapex shapey shapez quatw quati quatj quatk
<LI> atom-ID = ID of atom which is an ellipsoid <PRE> atom-ID = ID of atom which is an ellipsoid
shapex,shapey,shapez = 3 diameters of ellipsoid (distance units) shapex,shapey,shapez = 3 diameters of ellipsoid (distance units)
quatw,quati,quatj,quatk = quaternion components for orientation of atom quatw,quati,quatj,quatk = quaternion components for orientation of atom
example: </PRE>
<LI>example:
<PRE> 12 1 2 1 1 0 0 0 <PRE> 12 1 2 1 1 0 0 0
</PRE> </PRE>
@ -674,10 +675,11 @@ values in this section must be integers (1, not 1.0).
<LI>line syntax: atom-ID x1 y1 x2 y2 <LI>line syntax: atom-ID x1 y1 x2 y2
<LI> atom-ID = ID of atom which is a line segment <PRE> atom-ID = ID of atom which is a line segment
x1,y1 = 1st end point x1,y1 = 1st end point
x2,y2 = 2nd end point x2,y2 = 2nd end point
example: </PRE>
<LI>example:
<PRE> 12 1.0 0.0 2.0 0.0 <PRE> 12 1.0 0.0 2.0 0.0
</PRE> </PRE>
@ -763,11 +765,12 @@ script.
<LI>line syntax: atom-ID x1 y1 x2 y2 <LI>line syntax: atom-ID x1 y1 x2 y2
<LI> atom-ID = ID of atom which is a line segment <PRE> atom-ID = ID of atom which is a line segment
x1,y1,z1 = 1st corner point x1,y1,z1 = 1st corner point
x2,y2,z2 = 2nd corner point x2,y2,z2 = 2nd corner point
x3,y3,z3 = 3rd corner point x3,y3,z3 = 3rd corner point
example: </PRE>
<LI>example:
<PRE> 12 0.0 0.0 0.0 2.0 0.0 1.0 0.0 2.0 1.0 <PRE> 12 0.0 0.0 0.0 2.0 0.0 1.0 0.0 2.0 1.0
</PRE> </PRE>

6
doc/read_data.txt
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@ -518,7 +518,7 @@ one line per ellipsoid :ulb,l
line syntax: atom-ID shapex shapey shapez quatw quati quatj quatk :l line syntax: atom-ID shapex shapey shapez quatw quati quatj quatk :l
atom-ID = ID of atom which is an ellipsoid atom-ID = ID of atom which is an ellipsoid
shapex,shapey,shapez = 3 diameters of ellipsoid (distance units) shapex,shapey,shapez = 3 diameters of ellipsoid (distance units)
quatw,quati,quatj,quatk = quaternion components for orientation of atom quatw,quati,quatj,quatk = quaternion components for orientation of atom :pre
example: :l example: :l
12 1 2 1 1 0 0 0 :pre 12 1 2 1 1 0 0 0 :pre
:ule :ule
@ -604,7 +604,7 @@ one line per line segment :ulb,l
line syntax: atom-ID x1 y1 x2 y2 :l line syntax: atom-ID x1 y1 x2 y2 :l
atom-ID = ID of atom which is a line segment atom-ID = ID of atom which is a line segment
x1,y1 = 1st end point x1,y1 = 1st end point
x2,y2 = 2nd end point x2,y2 = 2nd end point :pre
example: :l example: :l
12 1.0 0.0 2.0 0.0 :pre 12 1.0 0.0 2.0 0.0 :pre
:ule :ule
@ -677,7 +677,7 @@ line syntax: atom-ID x1 y1 x2 y2 :l
atom-ID = ID of atom which is a line segment atom-ID = ID of atom which is a line segment
x1,y1,z1 = 1st corner point x1,y1,z1 = 1st corner point
x2,y2,z2 = 2nd corner point x2,y2,z2 = 2nd corner point
x3,y3,z3 = 3rd corner point x3,y3,z3 = 3rd corner point :pre
example: :l example: :l
12 0.0 0.0 0.0 2.0 0.0 1.0 0.0 2.0 1.0 :pre 12 0.0 0.0 0.0 2.0 0.0 1.0 0.0 2.0 1.0 :pre
:ule :ule