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git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@9344 f3b2605a-c512-4ea7-a41b-209d697bcdaa

This commit is contained in:
sjplimp 2013-01-26 00:32:41 +00:00
parent d5de73bf98
commit e6164d65f2
4 changed files with 17 additions and 14 deletions
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2
doc/Section_commands.html
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@ -389,7 +389,7 @@ each style or click on the style itself for a full description:
<TR ALIGN="center"><TD ><A HREF = "compute_pe_atom.html">pe/atom</A></TD><TD ><A HREF = "compute_pressure.html">pressure</A></TD><TD ><A HREF = "compute_property_atom.html">property/atom</A></TD><TD ><A HREF = "compute_property_local.html">property/local</A></TD><TD ><A HREF = "compute_property_molecule.html">property/molecule</A></TD><TD ><A HREF = "compute_rdf.html">rdf</A></TD></TR>
<TR ALIGN="center"><TD ><A HREF = "compute_reduce.html">reduce</A></TD><TD ><A HREF = "compute_reduce.html">reduce/region</A></TD><TD ><A HREF = "compute_slice.html">slice</A></TD><TD ><A HREF = "compute_stress_atom.html">stress/atom</A></TD><TD ><A HREF = "compute_temp.html">temp</A></TD><TD ><A HREF = "compute_temp_asphere.html">temp/asphere</A></TD></TR>
<TR ALIGN="center"><TD ><A HREF = "compute_temp_com.html">temp/com</A></TD><TD ><A HREF = "compute_temp_deform.html">temp/deform</A></TD><TD ><A HREF = "compute_temp_partial.html">temp/partial</A></TD><TD ><A HREF = "compute_temp_profile.html">temp/profile</A></TD><TD ><A HREF = "compute_temp_ramp.html">temp/ramp</A></TD><TD ><A HREF = "compute_temp_region.html">temp/region</A></TD></TR>
<TR ALIGN="center"><TD ><A HREF = "compute_temp_sphere.html">temp/sphere</A></TD><TD ><A HREF = "compute_ti.html">ti</A></TD><TD ><A HREF = "compute_coord_atom.html">voronoi/atom</A>
<TR ALIGN="center"><TD ><A HREF = "compute_temp_sphere.html">temp/sphere</A></TD><TD ><A HREF = "compute_ti.html">ti</A></TD><TD ><A HREF = "compute_voronoi_atom.html">voronoi/atom</A>
</TD></TR></TABLE></DIV>
<P>These are compute styles contributed by users, which can be used if

2
doc/Section_commands.txt
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@ -595,7 +595,7 @@ each style or click on the style itself for a full description:
"temp/region"_compute_temp_region.html,
"temp/sphere"_compute_temp_sphere.html,
"ti"_compute_ti.html,
"voronoi/atom"_compute_coord_atom.html :tb(c=6,ea=c)
"voronoi/atom"_compute_voronoi_atom.html :tb(c=6,ea=c)
These are compute styles contributed by users, which can be used if
"LAMMPS is built with the appropriate

21
doc/read_data.html
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@ -571,10 +571,11 @@ section must be integers (1, not 1.0).
<LI>line syntax: atom-ID shapex shapey shapez quatw quati quatj quatk
<LI> atom-ID = ID of atom which is an ellipsoid
<PRE> atom-ID = ID of atom which is an ellipsoid
shapex,shapey,shapez = 3 diameters of ellipsoid (distance units)
quatw,quati,quatj,quatk = quaternion components for orientation of atom
example:
quatw,quati,quatj,quatk = quaternion components for orientation of atom
</PRE>
<LI>example:
<PRE> 12 1 2 1 1 0 0 0
</PRE>
@ -674,10 +675,11 @@ values in this section must be integers (1, not 1.0).
<LI>line syntax: atom-ID x1 y1 x2 y2
<LI> atom-ID = ID of atom which is a line segment
<PRE> atom-ID = ID of atom which is a line segment
x1,y1 = 1st end point
x2,y2 = 2nd end point
example:
x2,y2 = 2nd end point
</PRE>
<LI>example:
<PRE> 12 1.0 0.0 2.0 0.0
</PRE>
@ -763,11 +765,12 @@ script.
<LI>line syntax: atom-ID x1 y1 x2 y2
<LI> atom-ID = ID of atom which is a line segment
<PRE> atom-ID = ID of atom which is a line segment
x1,y1,z1 = 1st corner point
x2,y2,z2 = 2nd corner point
x3,y3,z3 = 3rd corner point
example:
x3,y3,z3 = 3rd corner point
</PRE>
<LI>example:
<PRE> 12 0.0 0.0 0.0 2.0 0.0 1.0 0.0 2.0 1.0
</PRE>

6
doc/read_data.txt
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@ -518,7 +518,7 @@ one line per ellipsoid :ulb,l
line syntax: atom-ID shapex shapey shapez quatw quati quatj quatk :l
atom-ID = ID of atom which is an ellipsoid
shapex,shapey,shapez = 3 diameters of ellipsoid (distance units)
quatw,quati,quatj,quatk = quaternion components for orientation of atom
quatw,quati,quatj,quatk = quaternion components for orientation of atom :pre
example: :l
12 1 2 1 1 0 0 0 :pre
:ule
@ -604,7 +604,7 @@ one line per line segment :ulb,l
line syntax: atom-ID x1 y1 x2 y2 :l
atom-ID = ID of atom which is a line segment
x1,y1 = 1st end point
x2,y2 = 2nd end point
x2,y2 = 2nd end point :pre
example: :l
12 1.0 0.0 2.0 0.0 :pre
:ule
@ -677,7 +677,7 @@ line syntax: atom-ID x1 y1 x2 y2 :l
atom-ID = ID of atom which is a line segment
x1,y1,z1 = 1st corner point
x2,y2,z2 = 2nd corner point
x3,y3,z3 = 3rd corner point
x3,y3,z3 = 3rd corner point :pre
example: :l
12 0.0 0.0 0.0 2.0 0.0 1.0 0.0 2.0 1.0 :pre
:ule