From d6357420ae18025c0f43be2f9f999b6873914fd8 Mon Sep 17 00:00:00 2001
From: Axel Kohlmeyer <akohlmey@gmail.com>
Date: Fri, 7 Apr 2017 15:29:56 -0400
Subject: [PATCH] propagate global package installation bugfix to explicit
 package scripts

---
 src/COMPRESS/Install.sh     | 2 +-
 src/KIM/Install.sh          | 2 +-
 src/MEAM/Install.sh         | 2 +-
 src/MPIIO/Install.sh        | 2 +-
 src/MSCG/Install.sh         | 2 +-
 src/POEMS/Install.sh        | 2 +-
 src/PYTHON/Install.sh       | 2 +-
 src/REAX/Install.sh         | 2 +-
 src/USER-ATC/Install.sh     | 2 +-
 src/USER-AWPMD/Install.sh   | 2 +-
 src/USER-COLVARS/Install.sh | 2 +-
 src/USER-H5MD/Install.sh    | 2 +-
 src/USER-MISC/Install.sh    | 2 +-
 src/USER-MOLFILE/Install.sh | 2 +-
 src/USER-NC-DUMP/Install.sh | 2 +-
 src/USER-QMMM/Install.sh    | 2 +-
 src/USER-QUIP/Install.sh    | 2 +-
 src/USER-SMD/Install.sh     | 2 +-
 src/USER-VTK/Install.sh     | 2 +-
 src/VORONOI/Install.sh      | 2 +-
 20 files changed, 20 insertions(+), 20 deletions(-)

diff --git a/src/COMPRESS/Install.sh b/src/COMPRESS/Install.sh
index ef1c8920c8..ab9dac33dc 100644
--- a/src/COMPRESS/Install.sh
+++ b/src/COMPRESS/Install.sh
@@ -29,7 +29,7 @@ action () {
 # all package files with no dependencies
 
 for file in *.cpp *.h; do
-  action $file
+  test -f ${file} && action $file
 done
 
 # edit 2 Makefile.package files to include/exclude package info
diff --git a/src/KIM/Install.sh b/src/KIM/Install.sh
index bac9d97cc6..7ddb9c8227 100644
--- a/src/KIM/Install.sh
+++ b/src/KIM/Install.sh
@@ -29,7 +29,7 @@ action () {
 # all package files with no dependencies
 
 for file in *.cpp *.h; do
-  action $file
+  test -f ${file} && action $file
 done
 
 # edit 2 Makefile.package files to include/exclude package info
diff --git a/src/MEAM/Install.sh b/src/MEAM/Install.sh
index 1825d4327f..7bfc76c0e2 100644
--- a/src/MEAM/Install.sh
+++ b/src/MEAM/Install.sh
@@ -29,7 +29,7 @@ action () {
 # all package files with no dependencies
 
 for file in *.cpp *.h; do
-  action $file
+  test -f ${file} && action $file
 done
 
 # edit 2 Makefile.package files to include/exclude package info
diff --git a/src/MPIIO/Install.sh b/src/MPIIO/Install.sh
index 3834aea5c5..902bff2fc8 100644
--- a/src/MPIIO/Install.sh
+++ b/src/MPIIO/Install.sh
@@ -36,7 +36,7 @@ touch ../write_restart.cpp
 # all package files with no dependencies
 
 for file in *.cpp *.h; do
-  action $file
+  test -f ${file} && action $file
 done
 
 # edit 2 Makefile.package to include/exclude LMP_MPIIO setting
diff --git a/src/MSCG/Install.sh b/src/MSCG/Install.sh
index f7c7452101..353403c7da 100755
--- a/src/MSCG/Install.sh
+++ b/src/MSCG/Install.sh
@@ -25,7 +25,7 @@ action () {
 # all package files with no dependencies
 
 for file in *.cpp *.h; do
-  action $file
+  test -f ${file} && action $file
 done
 
 # edit 2 Makefile.package files to include/exclude package info
diff --git a/src/POEMS/Install.sh b/src/POEMS/Install.sh
index 7996f542be..be407d76f0 100644
--- a/src/POEMS/Install.sh
+++ b/src/POEMS/Install.sh
@@ -29,7 +29,7 @@ action () {
 # all package files with no dependencies
 
 for file in *.cpp *.h; do
-  action $file
+  test -f ${file} && action $file
 done
 
 # edit 2 Makefile.package files to include/exclude package info
diff --git a/src/PYTHON/Install.sh b/src/PYTHON/Install.sh
index 3d6f71958a..71288cf377 100755
--- a/src/PYTHON/Install.sh
+++ b/src/PYTHON/Install.sh
@@ -35,7 +35,7 @@ touch ../variable.cpp
 # all package files with no dependencies
 
 for file in *.cpp *.h; do
-  action $file
+  test -f ${file} && action $file
 done
 
 # edit 2 Makefile.package files to include/exclude package info
diff --git a/src/REAX/Install.sh b/src/REAX/Install.sh
index f0083810e9..bf8c8dbca2 100644
--- a/src/REAX/Install.sh
+++ b/src/REAX/Install.sh
@@ -29,7 +29,7 @@ action () {
 # all package files with no dependencies
 
 for file in *.cpp *.h; do
-  action $file
+  test -f ${file} && action $file
 done
 
 # edit 2 Makefile.package files to include/exclude package info
diff --git a/src/USER-ATC/Install.sh b/src/USER-ATC/Install.sh
index 1137389018..f719fe220f 100755
--- a/src/USER-ATC/Install.sh
+++ b/src/USER-ATC/Install.sh
@@ -29,7 +29,7 @@ action () {
 # all package files with no dependencies
 
 for file in *.cpp *.h; do
-  action $file
+  test -f ${file} && action $file
 done
 
 # edit 2 Makefile.package files to include/exclude package info
diff --git a/src/USER-AWPMD/Install.sh b/src/USER-AWPMD/Install.sh
index 7922c53395..094e10c157 100644
--- a/src/USER-AWPMD/Install.sh
+++ b/src/USER-AWPMD/Install.sh
@@ -29,7 +29,7 @@ action () {
 # all package files with no dependencies
 
 for file in *.cpp *.h; do
-  action $file
+  test -f ${file} && action $file
 done
 
 # edit 2 Makefile.package files to include/exclude package info
diff --git a/src/USER-COLVARS/Install.sh b/src/USER-COLVARS/Install.sh
index c01719e766..d67883a416 100755
--- a/src/USER-COLVARS/Install.sh
+++ b/src/USER-COLVARS/Install.sh
@@ -29,7 +29,7 @@ action () {
 # all package files with no dependencies
 
 for file in *.cpp *.h; do
-  action $file
+  test -f ${file} && action $file
 done
 
 # edit 2 Makefile.package files to include/exclude package info
diff --git a/src/USER-H5MD/Install.sh b/src/USER-H5MD/Install.sh
index bdda732807..1070afaa96 100644
--- a/src/USER-H5MD/Install.sh
+++ b/src/USER-H5MD/Install.sh
@@ -27,7 +27,7 @@ action () {
 }
 
 for file in *.cpp *.h; do
-  action $file
+  test -f ${file} && action $file
 done
 
 # edit 2 Makefile.package files to include/exclude package info
diff --git a/src/USER-MISC/Install.sh b/src/USER-MISC/Install.sh
index 203d923164..2d42125ec3 100644
--- a/src/USER-MISC/Install.sh
+++ b/src/USER-MISC/Install.sh
@@ -35,6 +35,6 @@ for file in *.cpp *.h; do
   elif (test $file = "pair_cdeam.h") then
     action pair_cdeam.h pair_eam_alloy.cpp
   else
-    action $file
+    test -f ${file} && action $file
   fi
 done
diff --git a/src/USER-MOLFILE/Install.sh b/src/USER-MOLFILE/Install.sh
index 19fd3bd361..85885f66b9 100644
--- a/src/USER-MOLFILE/Install.sh
+++ b/src/USER-MOLFILE/Install.sh
@@ -29,7 +29,7 @@ action () {
 # all package files with no dependencies
 
 for file in *.cpp *.h; do
-  action $file
+  test -f ${file} && action $file
 done
 
 # edit 2 Makefile.package files to include/exclude package info
diff --git a/src/USER-NC-DUMP/Install.sh b/src/USER-NC-DUMP/Install.sh
index 37ebd0a0a5..4d21f0f894 100644
--- a/src/USER-NC-DUMP/Install.sh
+++ b/src/USER-NC-DUMP/Install.sh
@@ -27,7 +27,7 @@ action () {
 }
 
 for file in *.cpp *.h; do
-  action $file
+  test -f ${file} && action $file
 done
 
 # edit 2 Makefile.package files to include/exclude package info
diff --git a/src/USER-QMMM/Install.sh b/src/USER-QMMM/Install.sh
index 089b880a77..4bede66d80 100755
--- a/src/USER-QMMM/Install.sh
+++ b/src/USER-QMMM/Install.sh
@@ -29,7 +29,7 @@ action () {
 # all package files with no dependencies
 
 for file in *.cpp *.h; do
-  action $file
+  test -f ${file} && action $file
 done
 
 # edit 2 Makefile.package files to include/exclude package info
diff --git a/src/USER-QUIP/Install.sh b/src/USER-QUIP/Install.sh
index ee7faaf62a..20174e664a 100644
--- a/src/USER-QUIP/Install.sh
+++ b/src/USER-QUIP/Install.sh
@@ -29,7 +29,7 @@ action () {
 # all package files with no dependencies
 
 for file in *.cpp *.h; do
-  action $file
+  test -f ${file} && action $file
 done
 
 # edit 2 Makefile.package files to include/exclude package info
diff --git a/src/USER-SMD/Install.sh b/src/USER-SMD/Install.sh
index c0f48c5460..cb9aa5452b 100644
--- a/src/USER-SMD/Install.sh
+++ b/src/USER-SMD/Install.sh
@@ -29,7 +29,7 @@ action () {
 # all package files with no dependencies
 
 for file in *.cpp *.h; do
-  action $file
+  test -f ${file} && action $file
 done
 
 # edit 2 Makefile.package files to include/exclude package info
diff --git a/src/USER-VTK/Install.sh b/src/USER-VTK/Install.sh
index d02dc87772..3749242fb2 100644
--- a/src/USER-VTK/Install.sh
+++ b/src/USER-VTK/Install.sh
@@ -27,7 +27,7 @@ action () {
 }
 
 for file in *.cpp *.h; do
-  action $file
+  test -f ${file} && action $file
 done
 
 # edit 2 Makefile.package files to include/exclude package info
diff --git a/src/VORONOI/Install.sh b/src/VORONOI/Install.sh
index f21e9404eb..6373506b19 100755
--- a/src/VORONOI/Install.sh
+++ b/src/VORONOI/Install.sh
@@ -29,7 +29,7 @@ action () {
 # all package files with no dependencies
 
 for file in *.cpp *.h; do
-  action $file
+  test -f ${file} && action $file
 done
 
 # edit 2 Makefile.package files to include/exclude package info