From ca0c3cbe3e60a5d3dde37ead663564623c40b3e6 Mon Sep 17 00:00:00 2001
From: sjplimp <sjplimp@f3b2605a-c512-4ea7-a41b-209d697bcdaa>
Date: Fri, 16 May 2014 22:06:33 +0000
Subject: [PATCH] git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@12001
 f3b2605a-c512-4ea7-a41b-209d697bcdaa

---
 doc/Section_howto.html |  5 +++++
 doc/Section_howto.txt  |  5 +++++
 doc/thermo_style.html  | 30 +++++++++++++++---------------
 doc/thermo_style.txt   | 30 +++++++++++++++---------------
 4 files changed, 40 insertions(+), 30 deletions(-)

diff --git a/doc/Section_howto.html b/doc/Section_howto.html
index aeb21782fa..2f1dad4d54 100644
--- a/doc/Section_howto.html
+++ b/doc/Section_howto.html
@@ -1483,6 +1483,10 @@ as input to other output commands.
 </P>
 <H5><A NAME = "fixoutput"></A>Fixes that process output quantities 
 </H5>
+<P>The <A HREF = "fix_vector.html">fix vector</A> command can create global vectors as
+output from global scalars as input, accumulating them one element at
+a time.
+</P>
 <P>The <A HREF = "fix_ave_atom.html">fix ave/atom</A> command performs time-averaging
 of per-atom vectors.  The per-atom quantities can be atom attributes
 such as position, velocity, force.  They can also be per-atom
@@ -1559,6 +1563,7 @@ vector input could be a column of an array.
 <TR><TD ><A HREF = "compute_property_atom.html">compute property/atom</A></TD><TD > per-atom vectors</TD><TD > per-atom vector/array</TD><TD ></TD></TR>
 <TR><TD ><A HREF = "compute_property_local.html">compute property/local</A></TD><TD > local vectors</TD><TD > local vector/array</TD><TD ></TD></TR>
 <TR><TD ><A HREF = "compute_atom_molecule.html">compute atom/molecule</A></TD><TD > per-atom vectors</TD><TD > global vector/array</TD><TD ></TD></TR>
+<TR><TD ><A HREF = "fix_vector.html">fix vector</A></TD><TD > global scalars</TD><TD > global vector</TD><TD ></TD></TR>
 <TR><TD ><A HREF = "fix_ave_atom.html">fix ave/atom</A></TD><TD > per-atom vectors</TD><TD > per-atom vector/array</TD><TD ></TD></TR>
 <TR><TD ><A HREF = "fix_ave_time.html">fix ave/time</A></TD><TD > global scalars/vectors</TD><TD > global scalar/vector/array, file</TD><TD ></TD></TR>
 <TR><TD ><A HREF = "fix_ave_spatial.html">fix ave/spatial</A></TD><TD > per-atom vectors</TD><TD > global array, file</TD><TD ></TD></TR>
diff --git a/doc/Section_howto.txt b/doc/Section_howto.txt
index ea8a0024dc..b5f9b5eb21 100644
--- a/doc/Section_howto.txt
+++ b/doc/Section_howto.txt
@@ -1472,6 +1472,10 @@ as input to other output commands.
 
 Fixes that process output quantities :h5,link(fixoutput)
 
+The "fix vector"_fix_vector.html command can create global vectors as
+output from global scalars as input, accumulating them one element at
+a time.
+
 The "fix ave/atom"_fix_ave_atom.html command performs time-averaging
 of per-atom vectors.  The per-atom quantities can be atom attributes
 such as position, velocity, force.  They can also be per-atom
@@ -1547,6 +1551,7 @@ Command: Input: Output:
 "compute property/atom"_compute_property_atom.html: per-atom vectors: per-atom vector/array:
 "compute property/local"_compute_property_local.html: local vectors: local vector/array:
 "compute atom/molecule"_compute_atom_molecule.html: per-atom vectors: global vector/array:
+"fix vector"_fix_vector.html: global scalars: global vector:
 "fix ave/atom"_fix_ave_atom.html: per-atom vectors: per-atom vector/array:
 "fix ave/time"_fix_ave_time.html: global scalars/vectors: global scalar/vector/array, file:
 "fix ave/spatial"_fix_ave_spatial.html: per-atom vectors: global array, file:
diff --git a/doc/thermo_style.html b/doc/thermo_style.html
index f8c8030406..beaa64e33f 100644
--- a/doc/thermo_style.html
+++ b/doc/thermo_style.html
@@ -21,21 +21,21 @@
 
 <PRE>  <I>one</I> args = none
   <I>multi</I> args = none
-  <I>custom</I> args = list of attributes
-    possible attributes = step, elapsed, elaplong, dt, time,
-                          cpu, tpcpu, spcpu, cpuremain, part,
-                          atoms, temp, press, pe, ke, etotal, enthalpy,
-                          evdwl, ecoul, epair, ebond, eangle, edihed, eimp,
-                          emol, elong, etail,
-                          vol, density, lx, ly, lz, xlo, xhi, ylo, yhi, zlo, zhi,
-			  xy, xz, yz, xlat, ylat, zlat,
-                          bonds, angles, dihedrals, impropers,
-			  pxx, pyy, pzz, pxy, pxz, pyz,
-			  fmax, fnorm,
-			  cella, cellb, cellc, cellalpha, cellbeta, cellgamma,
-			  c_ID, c_ID[I], c_ID[I][J],
-                          f_ID, f_ID[I], f_ID[I][J],
-                          v_name
+  <I>custom</I> args = list of keywords
+    possible keywords = step, elapsed, elaplong, dt, time,
+                        cpu, tpcpu, spcpu, cpuremain, part,
+                        atoms, temp, press, pe, ke, etotal, enthalpy,
+                        evdwl, ecoul, epair, ebond, eangle, edihed, eimp,
+                        emol, elong, etail,
+                        vol, density, lx, ly, lz, xlo, xhi, ylo, yhi, zlo, zhi,
+		        xy, xz, yz, xlat, ylat, zlat,
+                        bonds, angles, dihedrals, impropers,
+		        pxx, pyy, pzz, pxy, pxz, pyz,
+			fmax, fnorm,
+			cella, cellb, cellc, cellalpha, cellbeta, cellgamma,
+			c_ID, c_ID[I], c_ID[I][J],
+                        f_ID, f_ID[I], f_ID[I][J],
+                        v_name
       step = timestep
       elapsed = timesteps since start of this run
       elaplong = timesteps since start of initial run in a series of runs
diff --git a/doc/thermo_style.txt b/doc/thermo_style.txt
index f0adef0ab2..633c46309e 100644
--- a/doc/thermo_style.txt
+++ b/doc/thermo_style.txt
@@ -16,21 +16,21 @@ style = {one} or {multi} or {custom} :ulb,l
 args = list of arguments for a particular style :l
   {one} args = none
   {multi} args = none
-  {custom} args = list of attributes
-    possible attributes = step, elapsed, elaplong, dt, time,
-                          cpu, tpcpu, spcpu, cpuremain, part,
-                          atoms, temp, press, pe, ke, etotal, enthalpy,
-                          evdwl, ecoul, epair, ebond, eangle, edihed, eimp,
-                          emol, elong, etail,
-                          vol, density, lx, ly, lz, xlo, xhi, ylo, yhi, zlo, zhi,
-			  xy, xz, yz, xlat, ylat, zlat,
-                          bonds, angles, dihedrals, impropers,
-			  pxx, pyy, pzz, pxy, pxz, pyz,
-			  fmax, fnorm,
-			  cella, cellb, cellc, cellalpha, cellbeta, cellgamma,
-			  c_ID, c_ID\[I\], c_ID\[I\]\[J\],
-                          f_ID, f_ID\[I\], f_ID\[I\]\[J\],
-                          v_name
+  {custom} args = list of keywords
+    possible keywords = step, elapsed, elaplong, dt, time,
+                        cpu, tpcpu, spcpu, cpuremain, part,
+                        atoms, temp, press, pe, ke, etotal, enthalpy,
+                        evdwl, ecoul, epair, ebond, eangle, edihed, eimp,
+                        emol, elong, etail,
+                        vol, density, lx, ly, lz, xlo, xhi, ylo, yhi, zlo, zhi,
+		        xy, xz, yz, xlat, ylat, zlat,
+                        bonds, angles, dihedrals, impropers,
+		        pxx, pyy, pzz, pxy, pxz, pyz,
+			fmax, fnorm,
+			cella, cellb, cellc, cellalpha, cellbeta, cellgamma,
+			c_ID, c_ID\[I\], c_ID\[I\]\[J\],
+                        f_ID, f_ID\[I\], f_ID\[I\]\[J\],
+                        v_name
       step = timestep
       elapsed = timesteps since start of this run
       elaplong = timesteps since start of initial run in a series of runs