From bff5eabe9938876984f8d510bdde64708616cd4a Mon Sep 17 00:00:00 2001 From: pscrozi Date: Wed, 27 Sep 2006 23:56:03 +0000 Subject: [PATCH] git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@36 f3b2605a-c512-4ea7-a41b-209d697bcdaa --- doc/Section_howto.html | 12 ++++++------ doc/Section_howto.txt | 12 ++++++------ 2 files changed, 12 insertions(+), 12 deletions(-) diff --git a/doc/Section_howto.html b/doc/Section_howto.html index fdc91cf5f5..26d959887d 100644 --- a/doc/Section_howto.html +++ b/doc/Section_howto.html @@ -503,14 +503,14 @@ which has been linked to LAMMPS as a library. This is the way the POEMS package that performs constrained rigid-body motion on groups of atoms is hooked to LAMMPS. See the fix_poems command for more details. See this -section of the documention for info on how to add +section of the documentation for info on how to add a new fix to LAMMPS.

(2) Define a new LAMMPS command that calls the other code. This is conceptually similar to method (1), but in this case LAMMPS and the -the other code are on a more equal footing. Note that now the other +other code are on a more equal footing. Note that now the other code is not called during the timesteps of a LAMMPS run, but between runs. The LAMMPS input script can be used to alternate LAMMPS runs with calls to the other code, invoked via the new command. The @@ -525,7 +525,7 @@ processors to start up another program). In the latter case the stand-alone code could communicate with LAMMPS thru files that the command writes and reads.

-

See this section of the documention for how to +

See this section of the documentation for how to add a new command to LAMMPS.

(3) Use LAMMPS as a library called by another code. In this case the @@ -535,8 +535,8 @@ Again, the run command has options that allow it to be invoked with minimal overhead (no setup or clean-up) if you wish to do multiple short runs, driven by another program.

-

This section of the documention describes how -to build LAMMPS as a library. Once this is done, you can interface +

This section of the documentation describes +how to build LAMMPS as a library. Once this is done, you can interface with LAMMPS either via C++, C, or Fortran (or any other language that supports a vanilla C-like interface, e.g. a scripting language). For example, from C++ you could create an "instance" of LAMMPS, and @@ -583,7 +583,7 @@ back into LAMMPS. -

(Cornell) Corenll, Cieplak, Bayly, Gould, Merz, Ferguson, +

(Cornell) Cornell, Cieplak, Bayly, Gould, Merz, Ferguson, Spellmeyer, Fox, Caldwell, Kollman, JACS 117, 5179-5197 (1995).

diff --git a/doc/Section_howto.txt b/doc/Section_howto.txt index 46622b3e9c..ebb89cc241 100644 --- a/doc/Section_howto.txt +++ b/doc/Section_howto.txt @@ -499,14 +499,14 @@ which has been linked to LAMMPS as a library. This is the way the "POEMS"_poems package that performs constrained rigid-body motion on groups of atoms is hooked to LAMMPS. See the "fix_poems"_fix_poems.html command for more details. See "this -section"_Section_modify.html of the documention for info on how to add +section"_Section_modify.html of the documentation for info on how to add a new fix to LAMMPS. :link(poems,http://www.rpi.edu/~anderk5/lab) (2) Define a new LAMMPS command that calls the other code. This is conceptually similar to method (1), but in this case LAMMPS and the -the other code are on a more equal footing. Note that now the other +other code are on a more equal footing. Note that now the other code is not called during the timesteps of a LAMMPS run, but between runs. The LAMMPS input script can be used to alternate LAMMPS runs with calls to the other code, invoked via the new command. The @@ -521,7 +521,7 @@ processors to start up another program). In the latter case the stand-alone code could communicate with LAMMPS thru files that the command writes and reads. -See "this section"_Section_modify.html of the documention for how to +See "this section"_Section_modify.html of the documentation for how to add a new command to LAMMPS. (3) Use LAMMPS as a library called by another code. In this case the @@ -531,8 +531,8 @@ Again, the "run"_run.html command has options that allow it to be invoked with minimal overhead (no setup or clean-up) if you wish to do multiple short runs, driven by another program. -"This section"_Section_start.html#2_2 of the documention describes how -to build LAMMPS as a library. Once this is done, you can interface +"This section"_Section_start.html#2_2 of the documentation describes +how to build LAMMPS as a library. Once this is done, you can interface with LAMMPS either via C++, C, or Fortran (or any other language that supports a vanilla C-like interface, e.g. a scripting language). For example, from C++ you could create an "instance" of LAMMPS, and @@ -578,7 +578,7 @@ back into LAMMPS. :line :link(Cornell) -[(Cornell)] Corenll, Cieplak, Bayly, Gould, Merz, Ferguson, +[(Cornell)] Cornell, Cieplak, Bayly, Gould, Merz, Ferguson, Spellmeyer, Fox, Caldwell, Kollman, JACS 117, 5179-5197 (1995). :link(Horn)