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git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8249 f3b2605a-c512-4ea7-a41b-209d697bcdaa

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sjplimp 2012-06-08 17:08:04 +00:00
parent b0403e2c84
commit b6e626bc5b
6 changed files with 12 additions and 8 deletions
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3
doc/Section_intro.html
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@ -200,7 +200,8 @@ commands)
<LI> Brownian dynamics
<LI> rigid body integration
<LI> energy minimization via conjugate gradient or steepest descent relaxation
<LI> rRESPA hierarchical timestepping
<LI> rRESPA hierarchical timestepping
<LI> rerun command for post-processing of dump files
</UL>
<H4>Diagnostics
</H4>

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doc/Section_intro.txt
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@ -198,7 +198,8 @@ Integrators :h4
Brownian dynamics
rigid body integration
energy minimization via conjugate gradient or steepest descent relaxation
rRESPA hierarchical timestepping :ul
rRESPA hierarchical timestepping
rerun command for post-processing of dump files :ul
Diagnostics :h4

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doc/compute_rdf.html
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@ -119,7 +119,8 @@ also numbers >= 0.0.
<P>The RDF is not computed for distances longer than the force cutoff,
since processors (in parallel) don't know about atom coordinates for
atoms further away than that distance. If you want an RDF for larger
distances, you'll need to post-process a dump file.
distances, you can use the <A HREF = "rerun.html">rerun</A> command to post-process
a dump file.
</P>
<P><B>Related commands:</B>
</P>

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doc/compute_rdf.txt
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@ -116,7 +116,8 @@ also numbers >= 0.0.
The RDF is not computed for distances longer than the force cutoff,
since processors (in parallel) don't know about atom coordinates for
atoms further away than that distance. If you want an RDF for larger
distances, you'll need to post-process a dump file.
distances, you can use the "rerun"_rerun.html command to post-process
a dump file.
[Related commands:]

4
doc/dump.html
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@ -147,8 +147,8 @@ individual values and the file itself.
<P>The <I>atom</I>, <I>local</I>, and <I>custom</I> styles create files in a simple text
format that is self-explanatory when viewing a dump file. Many of the
LAMMPS <A HREF = "Section_tools.html">post-processing tools</A>, including
<A HREF = "http://www.sandia.gov/~sjplimp/pizza.html">Pizza.py</A>, work with
this format.
<A HREF = "http://www.sandia.gov/~sjplimp/pizza.html">Pizza.py</A>, work with this
format, as does the <A HREF = "rerun.html">rerun</A> fommand.
</P>
<P>For post-processing purposes the <I>atom</I> and <I>custom</I> text files are
self-describing in the following sense.

4
doc/dump.txt
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@ -136,8 +136,8 @@ individual values and the file itself.
The {atom}, {local}, and {custom} styles create files in a simple text
format that is self-explanatory when viewing a dump file. Many of the
LAMMPS "post-processing tools"_Section_tools.html, including
"Pizza.py"_http://www.sandia.gov/~sjplimp/pizza.html, work with
this format.
"Pizza.py"_http://www.sandia.gov/~sjplimp/pizza.html, work with this
format, as does the "rerun"_rerun.html fommand.
For post-processing purposes the {atom} and {custom} text files are
self-describing in the following sense.