From ac624c1f8259b43a6782c5774e81cd303df2311f Mon Sep 17 00:00:00 2001 From: sjplimp Date: Tue, 25 Oct 2011 15:07:42 +0000 Subject: [PATCH] git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7186 f3b2605a-c512-4ea7-a41b-209d697bcdaa --- doc/Section_accelerate.html | 2 +- doc/Section_accelerate.txt | 2 +- doc/Section_commands.html | 6 +++--- doc/Section_commands.txt | 2 +- doc/fix_wall_reflect.html | 8 ++++---- doc/fix_wall_reflect.txt | 8 ++++---- doc/fix_wall_srd.html | 8 ++++---- doc/fix_wall_srd.txt | 9 +++++---- 8 files changed, 23 insertions(+), 22 deletions(-) diff --git a/doc/Section_accelerate.html b/doc/Section_accelerate.html index 79df7ef875..b8c2b3a62a 100644 --- a/doc/Section_accelerate.html +++ b/doc/Section_accelerate.html @@ -150,7 +150,7 @@ it as follows: 

env OMP_NUM_THREADS=4 lmp_serial -sf omp -in in.script
 env OMP_NUM_THREADS=2 mpirun -np 2 lmp_machine -sf omp -in in.script
-mpirun -x OMP_NUM_THRADS=2 -np 2 lmp_machine -sf omp -in in.script 
+mpirun -x OMP_NUM_THREADS=2 -np 2 lmp_machine -sf omp -in in.script

The value of the environment variable OMP_NUM_THREADS determines how many threads per MPI task are launched. All three examples above use diff --git a/doc/Section_accelerate.txt b/doc/Section_accelerate.txt index fc06f3bcd4..4a9d08b001 100644 --- a/doc/Section_accelerate.txt +++ b/doc/Section_accelerate.txt @@ -145,7 +145,7 @@ it as follows: env OMP_NUM_THREADS=4 lmp_serial -sf omp -in in.script env OMP_NUM_THREADS=2 mpirun -np 2 lmp_machine -sf omp -in in.script -mpirun -x OMP_NUM_THRADS=2 -np 2 lmp_machine -sf omp -in in.script :pre +mpirun -x OMP_NUM_THREADS=2 -np 2 lmp_machine -sf omp -in in.script :pre The value of the environment variable OMP_NUM_THREADS determines how many threads per MPI task are launched. All three examples above use diff --git a/doc/Section_commands.html b/doc/Section_commands.html index c69566e177..6e1f356a9f 100644 --- a/doc/Section_commands.html +++ b/doc/Section_commands.html @@ -438,9 +438,9 @@ package.

- - - + +
awpmd/cutbuck/coulcg/cmmcg/cmm/coul/cut
cg/cmm/coul/longdipole/sfeam/cdedip
eff/cutlj/coullj/sfreax/csph/heatconduction
sph/idealgassph/ljsph/rhosumsph/taitwater
sph/taitwater/morris +
eff/cutlj/coullj/sfreax/c
sph/heatconductionsph/idealgassph/ljsph/rhosum
sph/taitwatersph/taitwater/morris

These are accelerated pair styles, which can be used if LAMMPS is diff --git a/doc/Section_commands.txt b/doc/Section_commands.txt index e8ca9cf708..e55664c629 100644 --- a/doc/Section_commands.txt +++ b/doc/Section_commands.txt @@ -695,7 +695,7 @@ package"_Section_start.html#start_3. "eff/cut"_pair_eff.html, "lj/coul"_pair_lj_coul.html, "lj/sf"_pair_lj_sf.html, -"reax/c"_pair_reax_c.html +"reax/c"_pair_reax_c.html, "sph/heatconduction"_pair_heatconduction.html, "sph/idealgas"_pair_idealgas.html, "sph/lj"_pair_lj.html, diff --git a/doc/fix_wall_reflect.html b/doc/fix_wall_reflect.html index 1f8bac0797..5e3aaa73aa 100644 --- a/doc/fix_wall_reflect.html +++ b/doc/fix_wall_reflect.html @@ -105,16 +105,16 @@ in a time-dependent fashion using equal-style variables. 

variable ramp equal ramp(0,10)
-fix 1 all wall xlo v_ramp 1.0 1.0 2.5 
+fix 1 all wall/reflect xlo v_ramp 
 
variable linear equal vlinear(0,20)
-fix 1 all wall xlo v_linear 1.0 1.0 2.5 
+fix 1 all wall/reflect xlo v_linear 
 
variable wiggle equal swiggle(0.0,5.0,3.0)
-fix 1 all wall xlo v_wiggle 1.0 1.0 2.5 
+fix 1 all wall/reflect xlo v_wiggle  
 
variable wiggle equal cwiggle(0.0,5.0,3.0)
-fix 1 all wall xlo v_wiggle 1.0 1.0 2.5 
+fix 1 all wall/reflect xlo v_wiggle

The ramp(lo,hi) function adjusts the wall position linearly from lo to hi over the course of a run. The linear(c0,velocity) function does diff --git a/doc/fix_wall_reflect.txt b/doc/fix_wall_reflect.txt index 197f84bc25..646e741eae 100644 --- a/doc/fix_wall_reflect.txt +++ b/doc/fix_wall_reflect.txt @@ -94,16 +94,16 @@ in a time-dependent fashion using equal-style "variables"_variable.html. variable ramp equal ramp(0,10) -fix 1 all wall xlo v_ramp :pre +fix 1 all wall/reflect xlo v_ramp :pre variable linear equal vlinear(0,20) -fix 1 all wall xlo v_linear :pre +fix 1 all wall/reflect xlo v_linear :pre variable wiggle equal swiggle(0.0,5.0,3.0) -fix 1 all wall xlo v_wiggle :pre +fix 1 all wall/reflect xlo v_wiggle :pre variable wiggle equal cwiggle(0.0,5.0,3.0) -fix 1 all wall xlo v_wiggle :pre +fix 1 all wall/reflect xlo v_wiggle :pre The ramp(lo,hi) function adjusts the wall position linearly from lo to hi over the course of a run. The linear(c0,velocity) function does diff --git a/doc/fix_wall_srd.html b/doc/fix_wall_srd.html index 770c03765f..cdb808f73c 100644 --- a/doc/fix_wall_srd.html +++ b/doc/fix_wall_srd.html @@ -139,16 +139,16 @@ in a time-dependent fashion using equal-style variables. 

variable ramp equal ramp(0,10)
-fix 1 all wall xlo v_ramp 1.0 1.0 2.5 
+fix 1 all wall/srd xlo v_ramp 
 
variable linear equal vlinear(0,20)
-fix 1 all wall xlo v_linear 1.0 1.0 2.5 
+fix 1 all wall/srd xlo v_linear 
 
variable wiggle equal swiggle(0.0,5.0,3.0)
-fix 1 all wall xlo v_wiggle 1.0 1.0 2.5 
+fix 1 all wall/srd xlo v_wiggle  
 
variable wiggle equal cwiggle(0.0,5.0,3.0)
-fix 1 all wall xlo v_wiggle 1.0 1.0 2.5 
+fix 1 all wall/srd xlo v_wiggle

The ramp(lo,hi) function adjusts the wall position linearly from lo to hi over the course of a run. The linear(c0,velocity) function does diff --git a/doc/fix_wall_srd.txt b/doc/fix_wall_srd.txt index c427fe0a8d..596ebe40b8 100644 --- a/doc/fix_wall_srd.txt +++ b/doc/fix_wall_srd.txt @@ -127,17 +127,18 @@ Here are examples of variable definitions that move the wall position in a time-dependent fashion using equal-style "variables"_variable.html. + variable ramp equal ramp(0,10) -fix 1 all wall xlo v_ramp 1.0 1.0 2.5 :pre +fix 1 all wall/srd xlo v_ramp :pre variable linear equal vlinear(0,20) -fix 1 all wall xlo v_linear 1.0 1.0 2.5 :pre +fix 1 all wall/srd xlo v_linear :pre variable wiggle equal swiggle(0.0,5.0,3.0) -fix 1 all wall xlo v_wiggle 1.0 1.0 2.5 :pre +fix 1 all wall/srd xlo v_wiggle :pre variable wiggle equal cwiggle(0.0,5.0,3.0) -fix 1 all wall xlo v_wiggle 1.0 1.0 2.5 :pre +fix 1 all wall/srd xlo v_wiggle :pre The ramp(lo,hi) function adjusts the wall position linearly from lo to hi over the course of a run. The linear(c0,velocity) function does