forked from lijiext/lammps
Added plog and pscreen options
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6419 f3b2605a-c512-4ea7-a41b-209d697bcdaa
This commit is contained in:
athomps
parent
3add701079
commit
aa0ecd0ab4
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@ -37,7 +37,7 @@ tar xvf lammps*.tar
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<P>This will create a LAMMPS directory containing two files and several
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sub-directories:
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</P>
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<DIV ALIGN=center><TABLE BORDER=1 >
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<DIV ALIGN=center><TABLE WIDTH="0%" BORDER=1 >
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<TR><TD >README</TD><TD > text file</TD></TR>
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<TR><TD >LICENSE</TD><TD > the GNU General Public License (GPL)</TD></TR>
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<TR><TD >bench</TD><TD > benchmark problems</TD></TR>
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@ -440,7 +440,7 @@ package".
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</P>
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<P>The current list of standard packages is as follows:
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</P>
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<DIV ALIGN=center><TABLE BORDER=1 >
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<DIV ALIGN=center><TABLE WIDTH="0%" BORDER=1 >
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<TR><TD >asphere </TD><TD > aspherical particles and force fields</TD></TR>
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<TR><TD >class2 </TD><TD > class 2 force fields</TD></TR>
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<TR><TD >colloid </TD><TD > colloidal particle force fields</TD></TR>
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@ -506,7 +506,8 @@ run a bit faster.
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no-name", where "name" is the name of the package. You can also type
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"make yes-standard", "make no-standard", "make yes-user", "make
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no-user", "make yes-all" or "make no-all" to include/exclude various
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sets of packages. Type "make package" to see the various options.
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sets of packages. Type "make package" to see the all of the
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package-related make options.
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</P>
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<P>IMPORTANT NOTE: These make commands work by simply moving files back
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and forth between the main src directory and sub-directories with the
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@ -514,19 +515,25 @@ package name, so that the files are seen or not seen when LAMMPS is
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built. After you have included or excluded a package, you must
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re-build LAMMPS.
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</P>
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<P>Additional make options exist to help manage LAMMPS files that exist
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<P>Additional package-related make options exist to help manage LAMMPS
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files that exist
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in both the src directory and in package sub-directories. You do not
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normally need to use these commands unless you are editing LAMMPS
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files or have downloaded a patch from the LAMMPS WWW site.
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</P>
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<P>Typing "make package-update" will overwrite src files with files from
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the package directories if the package has been included. It should
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the package sub-directories if the package has been included. It should
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be used after a patch is installed, since patches only update the
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master package version of a file. Typing "make package-overwrite"
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will overwrite files in the package directories with src files.
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Typing "make package-check" will list differences between src and
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package versions of the same files. Again, type "make package" to see
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the various options.
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files in the package sub-directory, but not the src files.
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Typing "make package-overwrite"
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will overwrite files in the package sub-directories with src files.
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</P>
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<P>Typing "make package-status" will show which packages are currently
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included. Of those that are included, it will list files that
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are different in the src directory and package sub-directory.
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Typing "make package-diff" lists all differences between these files.
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Again, type "make package" to see all of the
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package-related make options.
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</P>
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<HR>
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@ -824,6 +831,8 @@ abbreviation can be used:
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<LI>-i or -in
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<LI>-l or -log
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<LI>-p or -partition
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<LI>-pl or -plog
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<LI>-ps or -pscreen
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<LI>-sc or -screen
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<LI>-sf or -suffix
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<LI>-v or -var
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@ -877,6 +886,7 @@ logfile is named "file" and each partition also logs information to a
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file.N. For both one-partition and multi-partition mode, if the
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specified file is "none", then no log files are created. Using a
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<A HREF = "log.html">log</A> command in the input script will override this setting.
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Option -plog will override the name of the partition log files file.N.
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</P>
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<PRE>-partition 8x2 4 5 ...
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</PRE>
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@ -904,6 +914,35 @@ these commands in this way. Simulations running on different
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partitions can also communicate with each other; see the
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<A HREF = "temper.html">temper</A> command.
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</P>
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<PRE>-plog file
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</PRE>
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<P>Specify the base name for the partition log files,
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so partition N writes log information to file.N. If file is
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none, then no partition log files are created.
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This overrides the
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filename specified in the -log command-line option.
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This option is useful when working with large numbers of partitions,
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allowing the partition log files to be suppressed (-plog none) or
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placed in a sub-directory (-plog replica_files/log.lammps)
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If this option is not used
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the log file for partition N is log.lammps.N or whatever is specified by
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the -log command-line option.
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</P>
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<PRE>-pscreen file
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</PRE>
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<P>Specify the base name for the
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partition screen file, so partition N writes
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screen information to file.N. If file is
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none, then no partition screen files are created.
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This overrides the
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filename specified in the -screen command-line option.
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This option is useful when working with large numbers of partitions,
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allowing the partition screen files to be suppressed (-pscreen none) or
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placed in a sub-directory (-pscreen replica_files/screen)
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If this option is not used
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the screen file for partition N is screen.N or whatever is specified by
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the -screen command-line option.
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</P>
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<PRE>-screen file
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</PRE>
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<P>Specify a file for LAMMPS to write its screen information to. In
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@ -916,7 +955,8 @@ the partition ID. If the switch is specified in multi-partition mode,
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the hi-level screen dump is named "file" and each partition also
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writes screen information to a file.N. For both one-partition and
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multi-partition mode, if the specified file is "none", then no screen
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output is performed.
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output is performed. Option -pscreen will override the name of the
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partition screen files file.N.
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</P>
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<PRE>-suffix style
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</PRE>
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@ -499,7 +499,8 @@ Packages are included or excluded by typing "make yes-name" or "make
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no-name", where "name" is the name of the package. You can also type
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"make yes-standard", "make no-standard", "make yes-user", "make
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no-user", "make yes-all" or "make no-all" to include/exclude various
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sets of packages. Type "make package" to see the various options.
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sets of packages. Type "make package" to see the all of the
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package-related make options.
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IMPORTANT NOTE: These make commands work by simply moving files back
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and forth between the main src directory and sub-directories with the
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@ -507,19 +508,25 @@ package name, so that the files are seen or not seen when LAMMPS is
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built. After you have included or excluded a package, you must
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re-build LAMMPS.
|
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|
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Additional make options exist to help manage LAMMPS files that exist
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Additional package-related make options exist to help manage LAMMPS
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files that exist
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in both the src directory and in package sub-directories. You do not
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normally need to use these commands unless you are editing LAMMPS
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files or have downloaded a patch from the LAMMPS WWW site.
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|
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Typing "make package-update" will overwrite src files with files from
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the package directories if the package has been included. It should
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the package sub-directories if the package has been included. It should
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be used after a patch is installed, since patches only update the
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master package version of a file. Typing "make package-overwrite"
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will overwrite files in the package directories with src files.
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Typing "make package-check" will list differences between src and
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package versions of the same files. Again, type "make package" to see
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the various options.
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files in the package sub-directory, but not the src files.
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Typing "make package-overwrite"
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will overwrite files in the package sub-directories with src files.
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Typing "make package-status" will show which packages are currently
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included. Of those that are included, it will list files that
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are different in the src directory and package sub-directory.
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Typing "make package-diff" lists all differences between these files.
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Again, type "make package" to see all of the
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package-related make options.
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:line
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@ -814,6 +821,8 @@ abbreviation can be used:
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-i or -in
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-l or -log
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-p or -partition
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-pl or -plog
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-ps or -pscreen
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-sc or -screen
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-sf or -suffix
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-v or -var :ul
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@ -867,6 +876,7 @@ logfile is named "file" and each partition also logs information to a
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file.N. For both one-partition and multi-partition mode, if the
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specified file is "none", then no log files are created. Using a
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"log"_log.html command in the input script will override this setting.
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Option -plog will override the name of the partition log files file.N.
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-partition 8x2 4 5 ... :pre
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@ -894,6 +904,35 @@ these commands in this way. Simulations running on different
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partitions can also communicate with each other; see the
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"temper"_temper.html command.
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-plog file :pre
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Specify the base name for the partition log files,
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so partition N writes log information to file.N. If file is
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none, then no partition log files are created.
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This overrides the
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filename specified in the -log command-line option.
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This option is useful when working with large numbers of partitions,
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allowing the partition log files to be suppressed (-plog none) or
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placed in a sub-directory (-plog replica_files/log.lammps)
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If this option is not used
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the log file for partition N is log.lammps.N or whatever is specified by
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the -log command-line option.
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-pscreen file :pre
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Specify the base name for the
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partition screen file, so partition N writes
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screen information to file.N. If file is
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none, then no partition screen files are created.
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This overrides the
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filename specified in the -screen command-line option.
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This option is useful when working with large numbers of partitions,
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allowing the partition screen files to be suppressed (-pscreen none) or
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placed in a sub-directory (-pscreen replica_files/screen)
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If this option is not used
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the screen file for partition N is screen.N or whatever is specified by
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the -screen command-line option.
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-screen file :pre
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Specify a file for LAMMPS to write its screen information to. In
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@ -906,7 +945,8 @@ the partition ID. If the switch is specified in multi-partition mode,
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the hi-level screen dump is named "file" and each partition also
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writes screen information to a file.N. For both one-partition and
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multi-partition mode, if the specified file is "none", then no screen
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output is performed.
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output is performed. Option -pscreen will override the name of the
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partition screen files file.N.
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-suffix style :pre
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