updating files that have lists of command styles

This commit is contained in:
Steve Plimpton 2018-10-10 08:50:34 -06:00
parent 4015b36a1a
commit a979c6eeec
14 changed files with 230 additions and 218 deletions

View File

@ -34,7 +34,7 @@ OPT.
"fene (iko)"_bond_fene.html, "fene (iko)"_bond_fene.html,
"fene/expand (o)"_bond_fene_expand.html, "fene/expand (o)"_bond_fene_expand.html,
"gromos (o)"_bond_gromos.html, "gromos (o)"_bond_gromos.html,
"harmonic (ko)"_bond_harmonic.html, "harmonic (iko)"_bond_harmonic.html,
"harmonic/shift (o)"_bond_harmonic_shift.html, "harmonic/shift (o)"_bond_harmonic_shift.html,
"harmonic/shift/cut (o)"_bond_harmonic_shift_cut.html, "harmonic/shift/cut (o)"_bond_harmonic_shift_cut.html,
"morse (o)"_bond_morse.html, "morse (o)"_bond_morse.html,
@ -57,9 +57,11 @@ OPT.
"zero"_angle_zero.html, "zero"_angle_zero.html,
"hybrid"_angle_hybrid.html :tb(c=3,ea=c) "hybrid"_angle_hybrid.html :tb(c=3,ea=c)
"charmm (ko)"_angle_charmm.html, "charmm (iko)"_angle_charmm.html,
"class2 (ko)"_angle_class2.html, "class2 (ko)"_angle_class2.html,
"class2/p6"_angle_class2.html,
"cosine (o)"_angle_cosine.html, "cosine (o)"_angle_cosine.html,
"cosine/buck6d"_angle_cosine_buck6d.html,
"cosine/delta (o)"_angle_cosine_delta.html, "cosine/delta (o)"_angle_cosine_delta.html,
"cosine/periodic (o)"_angle_cosine_periodic.html, "cosine/periodic (o)"_angle_cosine_periodic.html,
"cosine/shift (o)"_angle_cosine_shift.html, "cosine/shift (o)"_angle_cosine_shift.html,
@ -97,7 +99,7 @@ OPT.
"nharmonic (o)"_dihedral_nharmonic.html, "nharmonic (o)"_dihedral_nharmonic.html,
"opls (iko)"_dihedral_opls.html, "opls (iko)"_dihedral_opls.html,
"quadratic (o)"_dihedral_quadratic.html, "quadratic (o)"_dihedral_quadratic.html,
"spherical (o)"_dihedral_spherical.html, "spherical"_dihedral_spherical.html,
"table (o)"_dihedral_table.html, "table (o)"_dihedral_table.html,
"table/cut"_dihedral_table_cut.html :tb(c=4,ea=c) "table/cut"_dihedral_table_cut.html :tb(c=4,ea=c)
@ -112,7 +114,7 @@ OPT.
"none"_improper_none.html, "none"_improper_none.html,
"zero"_improper_zero.html, "zero"_improper_zero.html,
"hybrid"_improper_hybrid.html :tb(c=3,ea=c) "hybrid"_improper_hybrid.html :tb(c=3,ea=c)
"class2 (ko)"_improper_class2.html, "class2 (ko)"_improper_class2.html,
"cossq (o)"_improper_cossq.html, "cossq (o)"_improper_cossq.html,
@ -120,5 +122,6 @@ OPT.
"distance"_improper_distance.html, "distance"_improper_distance.html,
"fourier (o)"_improper_fourier.html, "fourier (o)"_improper_fourier.html,
"harmonic (iko)"_improper_harmonic.html, "harmonic (iko)"_improper_harmonic.html,
"inversion/harmonic"_improper_inversion_harmonic.html,
"ring (o)"_improper_ring.html, "ring (o)"_improper_ring.html,
"umbrella (o)"_improper_umbrella.html :tb(c=4,ea=c) "umbrella (o)"_improper_umbrella.html :tb(c=4,ea=c)

View File

@ -92,6 +92,7 @@ KOKKOS, o = USER-OMP, t = OPT.
"pe/tally"_compute_tally.html, "pe/tally"_compute_tally.html,
"plasticity/atom"_compute_plasticity_atom.html, "plasticity/atom"_compute_plasticity_atom.html,
"pressure"_compute_pressure.html, "pressure"_compute_pressure.html,
"pressure/cylinder"_compute_pressure_cylinder.html,
"pressure/uef"_compute_pressure_uef.html, "pressure/uef"_compute_pressure_uef.html,
"property/atom"_compute_property_atom.html, "property/atom"_compute_property_atom.html,
"property/chunk"_compute_property_chunk.html, "property/chunk"_compute_property_chunk.html,
@ -118,7 +119,7 @@ KOKKOS, o = USER-OMP, t = OPT.
"smd/tlsph/strain"_compute_smd_tlsph_strain.html, "smd/tlsph/strain"_compute_smd_tlsph_strain.html,
"smd/tlsph/strain/rate"_compute_smd_tlsph_strain_rate.html, "smd/tlsph/strain/rate"_compute_smd_tlsph_strain_rate.html,
"smd/tlsph/stress"_compute_smd_tlsph_stress.html, "smd/tlsph/stress"_compute_smd_tlsph_stress.html,
"smd/triangle/mesh/vertices"_compute_smd_triangle_vertices.html, "smd/triangle/vertices"_compute_smd_triangle_vertices.html,
"smd/ulsph/num/neighs"_compute_smd_ulsph_num_neighs.html, "smd/ulsph/num/neighs"_compute_smd_ulsph_num_neighs.html,
"smd/ulsph/strain"_compute_smd_ulsph_strain.html, "smd/ulsph/strain"_compute_smd_ulsph_strain.html,
"smd/ulsph/strain/rate"_compute_smd_ulsph_strain_rate.html, "smd/ulsph/strain/rate"_compute_smd_ulsph_strain_rate.html,
@ -129,6 +130,8 @@ KOKKOS, o = USER-OMP, t = OPT.
"snav/atom"_compute_sna_atom.html, "snav/atom"_compute_sna_atom.html,
"spin"_compute_spin.html, "spin"_compute_spin.html,
"stress/atom"_compute_stress_atom.html, "stress/atom"_compute_stress_atom.html,
"stress/mop"_compute_stress_mop.html,
"stress/mop/profile"_compute_stress_mop.html,
"stress/tally"_compute_tally.html, "stress/tally"_compute_tally.html,
"tdpd/cc/atom"_compute_tdpd_cc_atom.html, "tdpd/cc/atom"_compute_tdpd_cc_atom.html,
"temp (k)"_compute_temp.html, "temp (k)"_compute_temp.html,
@ -136,6 +139,7 @@ KOKKOS, o = USER-OMP, t = OPT.
"temp/body"_compute_temp_body.html, "temp/body"_compute_temp_body.html,
"temp/chunk"_compute_temp_chunk.html, "temp/chunk"_compute_temp_chunk.html,
"temp/com"_compute_temp_com.html, "temp/com"_compute_temp_com.html,
"temp/cs"_compute_temp_cs.html,
"temp/deform"_compute_temp_deform.html, "temp/deform"_compute_temp_deform.html,
"temp/deform/eff"_compute_temp_deform_eff.html, "temp/deform/eff"_compute_temp_deform_eff.html,
"temp/drude"_compute_temp_drude.html, "temp/drude"_compute_temp_drude.html,

View File

@ -40,11 +40,13 @@ OPT.
"ave/time"_fix_ave_time.html, "ave/time"_fix_ave_time.html,
"aveforce"_fix_aveforce.html, "aveforce"_fix_aveforce.html,
"balance"_fix_balance.html, "balance"_fix_balance.html,
"bocs"_fix_bocs.html,
"bond/break"_fix_bond_break.html, "bond/break"_fix_bond_break.html,
"bond/create"_fix_bond_create.html, "bond/create"_fix_bond_create.html,
"bond/react"_fix_bond_react.html, "bond/react"_fix_bond_react.html,
"bond/swap"_fix_bond_swap.html, "bond/swap"_fix_bond_swap.html,
"box/relax"_fix_box_relax.html, "box/relax"_fix_box_relax.html,
"client/md"_fix_client_md.html,
"cmap"_fix_cmap.html, "cmap"_fix_cmap.html,
"colvars"_fix_colvars.html, "colvars"_fix_colvars.html,
"controller"_fix_controller.html, "controller"_fix_controller.html,
@ -54,7 +56,7 @@ OPT.
"drag"_fix_drag.html, "drag"_fix_drag.html,
"drude"_fix_drude.html, "drude"_fix_drude.html,
"drude/transform/direct"_fix_drude_transform.html, "drude/transform/direct"_fix_drude_transform.html,
"drude/transform/reverse"_fix_drude_transform.html, "drude/transform/inverse"_fix_drude_transform.html,
"dt/reset"_fix_dt_reset.html, "dt/reset"_fix_dt_reset.html,
"edpd/source"_fix_dpd_source.html, "edpd/source"_fix_dpd_source.html,
"efield"_fix_efield.html, "efield"_fix_efield.html,
@ -107,15 +109,16 @@ OPT.
"nph/eff"_fix_nh_eff.html, "nph/eff"_fix_nh_eff.html,
"nph/sphere (ko)"_fix_nph_sphere.html, "nph/sphere (ko)"_fix_nph_sphere.html,
"nphug (o)"_fix_nphug.html, "nphug (o)"_fix_nphug.html,
"npt (kio)"_fix_nh.html, "npt (iko)"_fix_nh.html,
"npt/asphere (o)"_fix_npt_asphere.html, "npt/asphere (o)"_fix_npt_asphere.html,
"npt/body"_fix_npt_body.html, "npt/body"_fix_npt_body.html,
"npt/eff"_fix_nh_eff.html, "npt/eff"_fix_nh_eff.html,
"npt/sphere (o)"_fix_npt_sphere.html, "npt/sphere (o)"_fix_npt_sphere.html,
"npt/uef"_fix_nh_uef.html, "npt/uef"_fix_nh_uef.html,
"nve (kio)"_fix_nve.html, "nve (iko)"_fix_nve.html,
"nve/asphere (i)"_fix_nve_asphere.html, "nve/asphere (i)"_fix_nve_asphere.html,
"nve/asphere/noforce"_fix_nve_asphere_noforce.html, "nve/asphere/noforce"_fix_nve_asphere_noforce.html,
"nve/awpmd"_fix_nve_awpmd.html,
"nve/body"_fix_nve_body.html, "nve/body"_fix_nve_body.html,
"nve/dot"_fix_nve_dot.html, "nve/dot"_fix_nve_dot.html,
"nve/dotc/langevin"_fix_nve_dotc_langevin.html, "nve/dotc/langevin"_fix_nve_dotc_langevin.html,
@ -170,26 +173,26 @@ OPT.
"rhok"_fix_rhok.html, "rhok"_fix_rhok.html,
"rigid (o)"_fix_rigid.html, "rigid (o)"_fix_rigid.html,
"rigid/nph (o)"_fix_rigid.html, "rigid/nph (o)"_fix_rigid.html,
"rigid/nph/small"_fix_rigid.html,
"rigid/npt (o)"_fix_rigid.html, "rigid/npt (o)"_fix_rigid.html,
"rigid/npt/small"_fix_rigid.html,
"rigid/nve (o)"_fix_rigid.html, "rigid/nve (o)"_fix_rigid.html,
"rigid/nve/small"_fix_rigid.html,
"rigid/nvt (o)"_fix_rigid.html, "rigid/nvt (o)"_fix_rigid.html,
"rigid/nvt/small"_fix_rigid.html,
"rigid/small (o)"_fix_rigid.html, "rigid/small (o)"_fix_rigid.html,
"rigid/small/nph"_fix_rigid.html,
"rigid/small/npt"_fix_rigid.html,
"rigid/small/nve"_fix_rigid.html,
"rigid/small/nvt"_fix_rigid.html,
"rx (k)"_fix_rx.html, "rx (k)"_fix_rx.html,
"saed/vtk"_fix_saed_vtk.html, "saed/vtk"_fix_saed_vtk.html,
"setforce (k)"_fix_setforce.html, "setforce (k)"_fix_setforce.html,
"shake"_fix_shake.html, "shake"_fix_shake.html,
"shardlow (k)"_fix_shardlow.html, "shardlow (k)"_fix_shardlow.html,
"smd"_fix_smd.html, "smd"_fix_smd.html,
"smd/adjust/dt"_fix_smd_adjust_dt.html, "smd/adjust_dt"_fix_smd_adjust_dt.html,
"smd/integrate/tlsph"_fix_smd_integrate_tlsph.html, "smd/integrate_tlsph"_fix_smd_integrate_tlsph.html,
"smd/integrate/ulsph"_fix_smd_integrate_ulsph.html, "smd/integrate_ulsph"_fix_smd_integrate_ulsph.html,
"smd/move/triangulated/surface"_fix_smd_move_triangulated_surface.html, "smd/move_tri_surf"_fix_smd_move_triangulated_surface.html,
"smd/setvel"_fix_smd_setvel.html, "smd/setvel"_fix_smd_setvel.html,
"smd/wall/surface"_fix_smd_wall_surface.html, "smd/wall_surface"_fix_smd_wall_surface.html,
"spring"_fix_spring.html, "spring"_fix_spring.html,
"spring/chunk"_fix_spring_chunk.html, "spring/chunk"_fix_spring_chunk.html,
"spring/rg"_fix_spring_rg.html, "spring/rg"_fix_spring_rg.html,

View File

@ -31,8 +31,8 @@ OPT.
"adp (o)"_pair_adp.html, "adp (o)"_pair_adp.html,
"agni (o)"_pair_agni.html, "agni (o)"_pair_agni.html,
"airebo (oi)"_pair_airebo.html, "airebo (io)"_pair_airebo.html,
"airebo/morse (oi)"_pair_airebo.html, "airebo/morse (io)"_pair_airebo.html,
"atm"_pair_atm.html, "atm"_pair_atm.html,
"awpmd/cut"_pair_awpmd.html, "awpmd/cut"_pair_awpmd.html,
"beck (go)"_pair_beck.html, "beck (go)"_pair_beck.html,
@ -42,21 +42,23 @@ OPT.
"bop"_pair_bop.html, "bop"_pair_bop.html,
"born (go)"_pair_born.html, "born (go)"_pair_born.html,
"born/coul/dsf"_pair_born.html, "born/coul/dsf"_pair_born.html,
"born/coul/dsf/cs"_pair_born.html, "born/coul/dsf/cs"_pair_cs.html,
"born/coul/long (go)"_pair_born.html, "born/coul/long (go)"_pair_born.html,
"born/coul/long/cs"_pair_born.html, "born/coul/long/cs (g)"_pair_cs.html,
"born/coul/msm (o)"_pair_born.html, "born/coul/msm (o)"_pair_born.html,
"born/coul/wolf (go)"_pair_born.html, "born/coul/wolf (go)"_pair_born.html,
"born/coul/wolf/cs"_pair_born.html, "born/coul/wolf/cs (g)"_pair_cs.html,
"brownian (o)"_pair_brownian.html, "brownian (o)"_pair_brownian.html,
"brownian/poly (o)"_pair_brownian.html, "brownian/poly (o)"_pair_brownian.html,
"buck (giko)"_pair_buck.html, "buck (giko)"_pair_buck.html,
"buck/coul/cut (giko)"_pair_buck.html, "buck/coul/cut (giko)"_pair_buck.html,
"buck/coul/long (giko)"_pair_buck.html, "buck/coul/long (giko)"_pair_buck.html,
"buck/coul/long/cs"_pair_buck.html, "buck/coul/long/cs"_pair_cs.html,
"buck/coul/msm (o)"_pair_buck.html, "buck/coul/msm (o)"_pair_buck.html,
"buck/long/coul/long (o)"_pair_buck_long.html, "buck/long/coul/long (o)"_pair_buck_long.html,
"buck/mdf"_pair_mdf.html, "buck/mdf"_pair_mdf.html,
"buck6d/coul/gauss/dsf"_pair_buck6d_coul_gauss.html,
"buck6d/coul/gauss/long"_pair_buck6d_coul_gauss.html,
"colloid (go)"_pair_colloid.html, "colloid (go)"_pair_colloid.html,
"comb (o)"_pair_comb.html, "comb (o)"_pair_comb.html,
"comb3"_pair_comb.html, "comb3"_pair_comb.html,
@ -68,7 +70,7 @@ OPT.
"coul/long (gko)"_pair_coul.html, "coul/long (gko)"_pair_coul.html,
"coul/long/cs"_pair_coul.html, "coul/long/cs"_pair_coul.html,
"coul/long/soft (o)"_pair_lj_soft.html, "coul/long/soft (o)"_pair_lj_soft.html,
"coul/msm"_pair_coul.html, "coul/msm (o)"_pair_coul.html,
"coul/shield"_pair_coul_shield.html, "coul/shield"_pair_coul_shield.html,
"coul/streitz"_pair_coul.html, "coul/streitz"_pair_coul.html,
"coul/wolf (ko)"_pair_coul.html, "coul/wolf (ko)"_pair_coul.html,
@ -91,7 +93,7 @@ OPT.
"exp6/rx (k)"_pair_exp6_rx.html, "exp6/rx (k)"_pair_exp6_rx.html,
"extep"_pair_extep.html, "extep"_pair_extep.html,
"gauss (go)"_pair_gauss.html, "gauss (go)"_pair_gauss.html,
"gauss/cut"_pair_gauss.html, "gauss/cut (o)"_pair_gauss.html,
"gayberne (gio)"_pair_gayberne.html, "gayberne (gio)"_pair_gayberne.html,
"gran/hertz/history (o)"_pair_gran.html, "gran/hertz/history (o)"_pair_gran.html,
"gran/hooke (o)"_pair_gran.html, "gran/hooke (o)"_pair_gran.html,
@ -110,9 +112,9 @@ OPT.
"list"_pair_list.html, "list"_pair_list.html,
"lj/charmm/coul/charmm (iko)"_pair_charmm.html, "lj/charmm/coul/charmm (iko)"_pair_charmm.html,
"lj/charmm/coul/charmm/implicit (ko)"_pair_charmm.html, "lj/charmm/coul/charmm/implicit (ko)"_pair_charmm.html,
"lj/charmm/coul/long (giko)"_pair_charmm.html, "lj/charmm/coul/long (gikot)"_pair_charmm.html,
"lj/charmm/coul/long/soft (o)"_pair_charmm.html, "lj/charmm/coul/long/soft (o)"_pair_lj_soft.html,
"lj/charmm/coul/msm"_pair_charmm.html, "lj/charmm/coul/msm (o)"_pair_charmm.html,
"lj/charmmfsw/coul/charmmfsh"_pair_charmm.html, "lj/charmmfsw/coul/charmmfsh"_pair_charmm.html,
"lj/charmmfsw/coul/long"_pair_charmm.html, "lj/charmmfsw/coul/long"_pair_charmm.html,
"lj/class2 (gko)"_pair_class2.html, "lj/class2 (gko)"_pair_class2.html,
@ -130,7 +132,7 @@ OPT.
"lj/cut/coul/msm (go)"_pair_lj.html, "lj/cut/coul/msm (go)"_pair_lj.html,
"lj/cut/coul/wolf (o)"_pair_lj.html, "lj/cut/coul/wolf (o)"_pair_lj.html,
"lj/cut/dipole/cut (go)"_pair_dipole.html, "lj/cut/dipole/cut (go)"_pair_dipole.html,
"lj/cut/dipole/long"_pair_dipole.html, "lj/cut/dipole/long (g)"_pair_dipole.html,
"lj/cut/dipole/sf (go)"_pair_dipole.html, "lj/cut/dipole/sf (go)"_pair_dipole.html,
"lj/cut/soft (o)"_pair_lj_soft.html, "lj/cut/soft (o)"_pair_lj_soft.html,
"lj/cut/thole/long (o)"_pair_thole.html, "lj/cut/thole/long (o)"_pair_thole.html,
@ -138,15 +140,17 @@ OPT.
"lj/cut/tip4p/long (ot)"_pair_lj.html, "lj/cut/tip4p/long (ot)"_pair_lj.html,
"lj/cut/tip4p/long/soft (o)"_pair_lj_soft.html, "lj/cut/tip4p/long/soft (o)"_pair_lj_soft.html,
"lj/expand (gko)"_pair_lj_expand.html, "lj/expand (gko)"_pair_lj_expand.html,
"lj/expand/coul/long (g)"_pair_lj_expand.html,
"lj/gromacs (gko)"_pair_gromacs.html, "lj/gromacs (gko)"_pair_gromacs.html,
"lj/gromacs/coul/gromacs (ko)"_pair_gromacs.html, "lj/gromacs/coul/gromacs (ko)"_pair_gromacs.html,
"lj/long/coul/long (io)"_pair_lj_long.html, "lj/long/coul/long (iot)"_pair_lj_long.html,
"lj/long/dipole/long"_pair_dipole.html, "lj/long/dipole/long"_pair_dipole.html,
"lj/long/tip4p/long"_pair_lj_long.html, "lj/long/tip4p/long (o)"_pair_lj_long.html,
"lj/mdf"_pair_mdf.html, "lj/mdf"_pair_mdf.html,
"lj/sdk (gko)"_pair_sdk.html, "lj/sdk (gko)"_pair_sdk.html,
"lj/sdk/coul/long (go)"_pair_sdk.html, "lj/sdk/coul/long (go)"_pair_sdk.html,
"lj/sdk/coul/msm (o)"_pair_sdk.html, "lj/sdk/coul/msm (o)"_pair_sdk.html,
"lj/sf/dipole/sf (go)"_pair_dipole.html,
"lj/smooth (o)"_pair_lj_smooth.html, "lj/smooth (o)"_pair_lj_smooth.html,
"lj/smooth/linear (o)"_pair_lj_smooth_linear.html, "lj/smooth/linear (o)"_pair_lj_smooth_linear.html,
"lj96/cut (go)"_pair_lj96.html, "lj96/cut (go)"_pair_lj96.html,
@ -161,10 +165,10 @@ OPT.
"meam/spline (o)"_pair_meam_spline.html, "meam/spline (o)"_pair_meam_spline.html,
"meam/sw/spline"_pair_meam_sw_spline.html, "meam/sw/spline"_pair_meam_sw_spline.html,
"mgpt"_pair_mgpt.html, "mgpt"_pair_mgpt.html,
"mie/cut (o)"_pair_mie.html, "mie/cut (g)"_pair_mie.html,
"momb"_pair_momb.html, "momb"_pair_momb.html,
"morse (gkot)"_pair_morse.html, "morse (gkot)"_pair_morse.html,
"morse/smooth/linear"_pair_morse.html, "morse/smooth/linear (o)"_pair_morse.html,
"morse/soft"_pair_morse.html, "morse/soft"_pair_morse.html,
"multi/lucy"_pair_multi_lucy.html, "multi/lucy"_pair_multi_lucy.html,
"multi/lucy/rx (k)"_pair_multi_lucy_rx.html, "multi/lucy/rx (k)"_pair_multi_lucy_rx.html,
@ -180,7 +184,9 @@ OPT.
"oxdna2/coaxstk"_pair_oxdna2.html, "oxdna2/coaxstk"_pair_oxdna2.html,
"oxdna2/dh"_pair_oxdna2.html, "oxdna2/dh"_pair_oxdna2.html,
"oxdna2/excv"_pair_oxdna2.html, "oxdna2/excv"_pair_oxdna2.html,
"oxdna2/hbond"_pair_oxdna2.html,
"oxdna2/stk"_pair_oxdna2.html, "oxdna2/stk"_pair_oxdna2.html,
"oxdna2/xstk"_pair_oxdna2.html,
"peri/eps"_pair_peri.html, "peri/eps"_pair_peri.html,
"peri/lps (o)"_pair_peri.html, "peri/lps (o)"_pair_peri.html,
"peri/pmb (o)"_pair_peri.html, "peri/pmb (o)"_pair_peri.html,
@ -190,11 +196,11 @@ OPT.
"quip"_pair_quip.html, "quip"_pair_quip.html,
"reax"_pair_reax.html, "reax"_pair_reax.html,
"reax/c (ko)"_pair_reaxc.html, "reax/c (ko)"_pair_reaxc.html,
"rebo (oi)"_pair_airebo.html, "rebo (io)"_pair_airebo.html,
"resquared (go)"_pair_resquared.html, "resquared (go)"_pair_resquared.html,
"smd/hertz"_pair_smd_hertz.html, "smd/hertz"_pair_smd_hertz.html,
"smd/tlsph"_pair_smd_tlsph.html, "smd/tlsph"_pair_smd_tlsph.html,
"smd/triangulated/surface"_pair_smd_triangulated_surface.html, "smd/tri_surface"_pair_smd_triangulated_surface.html,
"smd/ulsph"_pair_smd_ulsph.html, "smd/ulsph"_pair_smd_ulsph.html,
"smtbq"_pair_smtbq.html, "smtbq"_pair_smtbq.html,
"snap (k)"_pair_snap.html, "snap (k)"_pair_snap.html,
@ -226,8 +232,8 @@ OPT.
"tip4p/long/soft (o)"_pair_lj_soft.html, "tip4p/long/soft (o)"_pair_lj_soft.html,
"tri/lj"_pair_tri_lj.html, "tri/lj"_pair_tri_lj.html,
"ufm (got)"_pair_ufm.html, "ufm (got)"_pair_ufm.html,
"vashishta (ko)"_pair_vashishta.html, "vashishta (gko)"_pair_vashishta.html,
"vashishta/table (o)"_pair_vashishta.html, "vashishta/table (o)"_pair_vashishta.html,
"yukawa (gok)"_pair_yukawa.html, "yukawa (gko)"_pair_yukawa.html,
"yukawa/colloid (go)"_pair_yukawa_colloid.html, "yukawa/colloid (go)"_pair_yukawa_colloid.html,
"zbl (gok)"_pair_zbl.html :tb(c=4,ea=c) "zbl (gko)"_pair_zbl.html :tb(c=4,ea=c)

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@ -62,18 +62,18 @@ which are included in the LAMMPS distribution. The full list of all
angle styles are is on the "Commands bond"_Commands_bond.html#angle angle styles are is on the "Commands bond"_Commands_bond.html#angle
doc page. doc page.
"angle_style none"_angle_none.html - turn off angle interactions "none"_angle_none.html - turn off angle interactions
"angle_style zero"_angle_zero.html - topology but no interactions "zero"_angle_zero.html - topology but no interactions
"angle_style hybrid"_angle_hybrid.html - define multiple styles of angle interactions :ul "hybrid"_angle_hybrid.html - define multiple styles of angle interactions :ul
"angle_style charmm"_angle_charmm.html - CHARMM angle "charmm"_angle_charmm.html - CHARMM angle
"angle_style class2"_angle_class2.html - COMPASS (class 2) angle "class2"_angle_class2.html - COMPASS (class 2) angle
"angle_style cosine"_angle_cosine.html - cosine angle potential "cosine"_angle_cosine.html - cosine angle potential
"angle_style cosine/delta"_angle_cosine_delta.html - difference of cosines angle potential "cosine/delta"_angle_cosine_delta.html - difference of cosines angle potential
"angle_style cosine/periodic"_angle_cosine_periodic.html - DREIDING angle "cosine/periodic"_angle_cosine_periodic.html - DREIDING angle
"angle_style cosine/squared"_angle_cosine_squared.html - cosine squared angle potential "cosine/squared"_angle_cosine_squared.html - cosine squared angle potential
"angle_style harmonic"_angle_harmonic.html - harmonic angle "harmonic"_angle_harmonic.html - harmonic angle
"angle_style table"_angle_table.html - tabulated by angle :ul "table"_angle_table.html - tabulated by angle :ul
:line :line

View File

@ -69,18 +69,18 @@ Note that there are also additional bond styles submitted by users
which are included in the LAMMPS distribution. The full list of all which are included in the LAMMPS distribution. The full list of all
bond styles is on the "Commands bond"_Commands_bond.html doc page. bond styles is on the "Commands bond"_Commands_bond.html doc page.
"bond_style none"_bond_none.html - turn off bonded interactions "none"_bond_none.html - turn off bonded interactions
"bond_style zero"_bond_zero.html - topology but no interactions "zero"_bond_zero.html - topology but no interactions
"bond_style hybrid"_bond_hybrid.html - define multiple styles of bond interactions :ul "hybrid"_bond_hybrid.html - define multiple styles of bond interactions :ul
"bond_style class2"_bond_class2.html - COMPASS (class 2) bond "class2"_bond_class2.html - COMPASS (class 2) bond
"bond_style fene"_bond_fene.html - FENE (finite-extensible non-linear elastic) bond "fene"_bond_fene.html - FENE (finite-extensible non-linear elastic) bond
"bond_style fene/expand"_bond_fene_expand.html - FENE bonds with variable size particles "fene/expand"_bond_fene_expand.html - FENE bonds with variable size particles
"bond_style harmonic"_bond_harmonic.html - harmonic bond "harmonic"_bond_harmonic.html - harmonic bond
"bond_style morse"_bond_morse.html - Morse bond "morse"_bond_morse.html - Morse bond
"bond_style nonlinear"_bond_nonlinear.html - nonlinear bond "nonlinear"_bond_nonlinear.html - nonlinear bond
"bond_style quartic"_bond_quartic.html - breakable quartic bond "quartic"_bond_quartic.html - breakable quartic bond
"bond_style table"_bond_table.html - tabulated by bond length :ul "table"_bond_table.html - tabulated by bond length :ul
:line :line

View File

@ -230,15 +230,19 @@ compute"_Commands_compute.html doc page are followed by one or more of
"reduce/region"_compute_reduce.html - same as compute reduce, within a region "reduce/region"_compute_reduce.html - same as compute reduce, within a region
"rigid/local"_compute_rigid_local.html - extract rigid body attributes "rigid/local"_compute_rigid_local.html - extract rigid body attributes
"slice"_compute_slice.html - extract values from global vector or array "slice"_compute_slice.html - extract values from global vector or array
"smd/triangle/vertices"_compute_smd_triangle_vertices.html -
"sna/atom"_compute_sna_atom.html - calculate bispectrum coefficients for each atom "sna/atom"_compute_sna_atom.html - calculate bispectrum coefficients for each atom
"snad/atom"_compute_sna_atom.html - derivative of bispectrum coefficients for each atom "snad/atom"_compute_sna_atom.html - derivative of bispectrum coefficients for each atom
"snav/atom"_compute_sna_atom.html - virial contribution from bispectrum coefficients for each atom "snav/atom"_compute_sna_atom.html - virial contribution from bispectrum coefficients for each atom
"stress/atom"_compute_stress_atom.html - stress tensor for each atom "stress/atom"_compute_stress_atom.html - stress tensor for each atom
"stress/mop"_compute_stress_mop.html -
"stress/mop/profile"_compute_stress_mop.html -
"temp"_compute_temp.html - temperature of group of atoms "temp"_compute_temp.html - temperature of group of atoms
"temp/asphere"_compute_temp_asphere.html - temperature of aspherical particles "temp/asphere"_compute_temp_asphere.html - temperature of aspherical particles
"temp/body"_compute_temp_body.html - temperature of body particles "temp/body"_compute_temp_body.html - temperature of body particles
"temp/chunk"_compute_temp_chunk.html - temperature of each chunk "temp/chunk"_compute_temp_chunk.html - temperature of each chunk
"temp/com"_compute_temp_com.html - temperature after subtracting center-of-mass velocity "temp/com"_compute_temp_com.html - temperature after subtracting center-of-mass velocity
"temp/cs"_compute_temp_cs.html -
"temp/deform"_compute_temp_deform.html - temperature excluding box deformation velocity "temp/deform"_compute_temp_deform.html - temperature excluding box deformation velocity
"temp/partial"_compute_temp_partial.html - temperature excluding one or more dimensions of velocity "temp/partial"_compute_temp_partial.html - temperature excluding one or more dimensions of velocity
"temp/profile"_compute_temp_profile.html - temperature excluding a binned velocity profile "temp/profile"_compute_temp_profile.html - temperature excluding a binned velocity profile

View File

@ -85,16 +85,16 @@ which are included in the LAMMPS distribution. The full list of all
dihedral styles is on the "Commands bond"_Commands_bond.html#dihedral dihedral styles is on the "Commands bond"_Commands_bond.html#dihedral
doc page. doc page.
"dihedral_style none"_dihedral_none.html - turn off dihedral interactions "none"_dihedral_none.html - turn off dihedral interactions
"dihedral_style zero"_dihedral_zero.html - topology but no interactions "zero"_dihedral_zero.html - topology but no interactions
"dihedral_style hybrid"_dihedral_hybrid.html - define multiple styles of dihedral interactions :ul "hybrid"_dihedral_hybrid.html - define multiple styles of dihedral interactions :ul
"dihedral_style charmm"_dihedral_charmm.html - CHARMM dihedral "charmm"_dihedral_charmm.html - CHARMM dihedral
"dihedral_style class2"_dihedral_class2.html - COMPASS (class 2) dihedral "class2"_dihedral_class2.html - COMPASS (class 2) dihedral
"dihedral_style harmonic"_dihedral_harmonic.html - harmonic dihedral "harmonic"_dihedral_harmonic.html - harmonic dihedral
"dihedral_style helix"_dihedral_helix.html - helix dihedral "helix"_dihedral_helix.html - helix dihedral
"dihedral_style multi/harmonic"_dihedral_multi_harmonic.html - multi-harmonic dihedral "multi/harmonic"_dihedral_multi_harmonic.html - multi-harmonic dihedral
"dihedral_style opls"_dihedral_opls.html - OPLS dihedral :ul "opls"_dihedral_opls.html - OPLS dihedral :ul
:line :line

View File

@ -64,14 +64,14 @@ which are included in the LAMMPS distribution. The full list of all
improper styles is on the "Commands bond"_Commands_bond.html#improper improper styles is on the "Commands bond"_Commands_bond.html#improper
doc page. doc page.
"improper_style none"_improper_none.html - turn off improper interactions "none"_improper_none.html - turn off improper interactions
"improper_style zero"_improper_zero.html - topology but no interactions "zero"_improper_zero.html - topology but no interactions
"improper_style hybrid"_improper_hybrid.html - define multiple styles of improper interactions :ul "hybrid"_improper_hybrid.html - define multiple styles of improper interactions :ul
"improper_style class2"_improper_class2.html - COMPASS (class 2) improper "class2"_improper_class2.html - COMPASS (class 2) improper
"improper_style cvff"_improper_cvff.html - CVFF improper "cvff"_improper_cvff.html - CVFF improper
"improper_style harmonic"_improper_harmonic.html - harmonic improper "harmonic"_improper_harmonic.html - harmonic improper
"improper_style umbrella"_improper_umbrella.html - DREIDING improper :ul "umbrella"_improper_umbrella.html - DREIDING improper :ul
:line :line

View File

@ -24,21 +24,21 @@ pair_style born/coul/dsf command :h3
pair_style style args :pre pair_style style args :pre
style = {born} or {born/coul/long} or {born/coul/long/cs} or {born/coul/msm} or {born/coul/wolf} style = {born} or {born/coul/long} or {born/coul/msm} or {born/coul/wolf}
args = list of arguments for a particular style :ul args = list of arguments for a particular style :ul
{born} args = cutoff {born} args = cutoff
cutoff = global cutoff for non-Coulombic interactions (distance units) cutoff = global cutoff for non-Coulombic interactions (distance units)
{born/coul/long} or {born/coul/long/cs} args = cutoff (cutoff2) {born/coul/long} args = cutoff (cutoff2)
cutoff = global cutoff for non-Coulombic (and Coulombic if only 1 arg) (distance units) cutoff = global cutoff for non-Coulombic (and Coulombic if only 1 arg) (distance units)
cutoff2 = global cutoff for Coulombic (optional) (distance units) cutoff2 = global cutoff for Coulombic (optional) (distance units)
{born/coul/msm} args = cutoff (cutoff2) {born/coul/msm} args = cutoff (cutoff2)
cutoff = global cutoff for non-Coulombic (and Coulombic if only 1 arg) (distance units) cutoff = global cutoff for non-Coulombic (and Coulombic if only 1 arg) (distance units)
cutoff2 = global cutoff for Coulombic (optional) (distance units) cutoff2 = global cutoff for Coulombic (optional) (distance units)
{born/coul/wolf} or {born/coul/wolf/cs} args = alpha cutoff (cutoff2) {born/coul/wolf} args = alpha cutoff (cutoff2)
alpha = damping parameter (inverse distance units) alpha = damping parameter (inverse distance units)
cutoff = global cutoff for non-Coulombic (and Coulombic if only 1 arg) (distance units) cutoff = global cutoff for non-Coulombic (and Coulombic if only 1 arg) (distance units)
cutoff2 = global cutoff for Coulombic (optional) (distance units) cutoff2 = global cutoff for Coulombic (optional) (distance units)
{born/coul/dsf} or {born/coul/dsf/cs} args = alpha cutoff (cutoff2) {born/coul/dsf} args = alpha cutoff (cutoff2)
alpha = damping parameter (inverse distance units) alpha = damping parameter (inverse distance units)
cutoff = global cutoff for non-Coulombic (and Coulombic if only 1 arg) (distance units) cutoff = global cutoff for non-Coulombic (and Coulombic if only 1 arg) (distance units)
cutoff2 = global cutoff for Coulombic (distance units) :pre cutoff2 = global cutoff for Coulombic (distance units) :pre

View File

@ -19,8 +19,6 @@ pair_style coul/dsf/gpu command :h3
pair_style coul/dsf/kk command :h3 pair_style coul/dsf/kk command :h3
pair_style coul/dsf/omp command :h3 pair_style coul/dsf/omp command :h3
pair_style coul/long command :h3 pair_style coul/long command :h3
pair_style coul/long/cs command :h3
pair_style coul/long/cs/gpu command :h3
pair_style coul/long/omp command :h3 pair_style coul/long/omp command :h3
pair_style coul/long/gpu command :h3 pair_style coul/long/gpu command :h3
pair_style coul/long/kk command :h3 pair_style coul/long/kk command :h3
@ -30,7 +28,6 @@ pair_style coul/streitz command :h3
pair_style coul/wolf command :h3 pair_style coul/wolf command :h3
pair_style coul/wolf/kk command :h3 pair_style coul/wolf/kk command :h3
pair_style coul/wolf/omp command :h3 pair_style coul/wolf/omp command :h3
pair_style coul/wolf/cs command :h3
pair_style tip4p/cut command :h3 pair_style tip4p/cut command :h3
pair_style tip4p/long command :h3 pair_style tip4p/long command :h3
pair_style tip4p/cut/omp command :h3 pair_style tip4p/cut/omp command :h3
@ -42,10 +39,8 @@ pair_style coul/cut cutoff
pair_style coul/debye kappa cutoff pair_style coul/debye kappa cutoff
pair_style coul/dsf alpha cutoff pair_style coul/dsf alpha cutoff
pair_style coul/long cutoff pair_style coul/long cutoff
pair_style coul/long/cs cutoff
pair_style coul/long/gpu cutoff pair_style coul/long/gpu cutoff
pair_style coul/wolf alpha cutoff pair_style coul/wolf alpha cutoff
pair_style coul/wolf/cs alpha cutoff
pair_style coul/streitz cutoff keyword alpha pair_style coul/streitz cutoff keyword alpha
pair_style tip4p/cut otype htype btype atype qdist cutoff pair_style tip4p/cut otype htype btype atype qdist cutoff
pair_style tip4p/long otype htype btype atype qdist cutoff :pre pair_style tip4p/long otype htype btype atype qdist cutoff :pre
@ -68,14 +63,12 @@ pair_style coul/dsf 0.05 10.0
pair_coeff * * :pre pair_coeff * * :pre
pair_style coul/long 10.0 pair_style coul/long 10.0
pair_style coul/long/cs 10.0
pair_coeff * * :pre pair_coeff * * :pre
pair_style coul/msm 10.0 pair_style coul/msm 10.0
pair_coeff * * :pre pair_coeff * * :pre
pair_style coul/wolf 0.2 9.0 pair_style coul/wolf 0.2 9.0
pair_style coul/wolf/cs 0.2 9.0
pair_coeff * * :pre pair_coeff * * :pre
pair_style coul/streitz 12.0 ewald pair_style coul/streitz 12.0 ewald
@ -204,12 +197,6 @@ option. The Coulombic cutoff specified for this style means that
pairwise interactions within this distance are computed directly; pairwise interactions within this distance are computed directly;
interactions outside that distance are computed in reciprocal space. interactions outside that distance are computed in reciprocal space.
Style {coul/long/cs} is identical to {coul/long} except that a term is
added for the "core/shell model"_Howto_coreshell.html to allow charges
on core and shell particles to be separated by r = 0.0. The same
correction is introduced for the {coul/wolf/cs} style which is
identical to {coul/wolf}.
Styles {tip4p/cut} and {tip4p/long} implement the coulomb part of Styles {tip4p/cut} and {tip4p/long} implement the coulomb part of
the TIP4P water model of "(Jorgensen)"_#Jorgensen3, which introduces the TIP4P water model of "(Jorgensen)"_#Jorgensen3, which introduces
a massless site located a short distance away from the oxygen atom a massless site located a short distance away from the oxygen atom
@ -317,9 +304,9 @@ This pair style can only be used via the {pair} keyword of the
[Restrictions:] [Restrictions:]
The {coul/long}, {coul/msm} and {tip4p/long} styles are part of the The {coul/long}, {coul/msm} and {tip4p/long} styles are part of the
KSPACE package. The {coul/long/cs} style is part of the CORESHELL KSPACE package. They are only enabled if LAMMPS was built with that
package. They are only enabled if LAMMPS was built with that package. package. See the "Build package"_Build_package.html doc page for more
See the "Build package"_Build_package.html doc page for more info. info.
[Related commands:] [Related commands:]

View File

@ -12,6 +12,7 @@ pair_style buck/coul/long/cs command :h3
pair_style born/coul/dsf/cs command :h3 pair_style born/coul/dsf/cs command :h3
pair_style born/coul/wolf/cs command :h3 pair_style born/coul/wolf/cs command :h3
pair_style born/coul/wolf/cs/gpu command :h3 pair_style born/coul/wolf/cs/gpu command :h3
pair_style lj/cut/coul/long/cs command :h3
[Syntax:] [Syntax:]
@ -52,6 +53,11 @@ pair_style born/coul/wolf/cs 0.25 10.0 12.0
pair_coeff * * 0.0 1.00 0.00 0.00 0.00 pair_coeff * * 0.0 1.00 0.00 0.00 0.00
pair_coeff 1 1 480.0 0.25 0.00 1.05 0.50 :pre pair_coeff 1 1 480.0 0.25 0.00 1.05 0.50 :pre
pair_style lj/cut/coul/long/cs 10.0
pair_style lj/cut/coul/long/cs 10.0 8.0
pair_coeff * * 100.0 3.0
pair_coeff 1 1 100.0 3.5 9.0 :pre
[Description:] [Description:]
These pair styles are designed to be used with the adiabatic These pair styles are designed to be used with the adiabatic
@ -99,6 +105,11 @@ a long-range solver, thus the only correction is the addition of a
minimal distance to avoid the possible r = 0.0 case for a minimal distance to avoid the possible r = 0.0 case for a
core/shell pair. core/shell pair.
Style {lj/cut/coul/long/cs} is identical to {lj/cut/coul/long} except
that a term is added for the "core/shell model"_Howto_coreshell.html
to allow charges on core and shell particles to be separated by r =
0.0.
:line :line
Styles with a {gpu}, {intel}, {kk}, {omp}, or {opt} suffix are Styles with a {gpu}, {intel}, {kk}, {omp}, or {opt} suffix are

View File

@ -25,7 +25,6 @@ pair_style lj/cut/coul/dsf/gpu command :h3
pair_style lj/cut/coul/dsf/kk command :h3 pair_style lj/cut/coul/dsf/kk command :h3
pair_style lj/cut/coul/dsf/omp command :h3 pair_style lj/cut/coul/dsf/omp command :h3
pair_style lj/cut/coul/long command :h3 pair_style lj/cut/coul/long command :h3
pair_style lj/cut/coul/long/cs command :h3
pair_style lj/cut/coul/long/gpu command :h3 pair_style lj/cut/coul/long/gpu command :h3
pair_style lj/cut/coul/long/kk command :h3 pair_style lj/cut/coul/long/kk command :h3
pair_style lj/cut/coul/long/intel command :h3 pair_style lj/cut/coul/long/intel command :h3
@ -46,7 +45,7 @@ pair_style lj/cut/tip4p/long/opt command :h3
pair_style style args :pre pair_style style args :pre
style = {lj/cut} or {lj/cut/coul/cut} or {lj/cut/coul/debye} or {lj/cut/coul/dsf} or {lj/cut/coul/long} or {lj/cut/coul/long/cs} or {lj/cut/coul/msm} or {lj/cut/tip4p/long} style = {lj/cut} or {lj/cut/coul/cut} or {lj/cut/coul/debye} or {lj/cut/coul/dsf} or {lj/cut/coul/long} {lj/cut/coul/msm} or {lj/cut/tip4p/long}
args = list of arguments for a particular style :ul args = list of arguments for a particular style :ul
{lj/cut} args = cutoff {lj/cut} args = cutoff
cutoff = global cutoff for Lennard Jones interactions (distance units) cutoff = global cutoff for Lennard Jones interactions (distance units)
@ -107,9 +106,7 @@ pair_coeff * * 1.0 1.0
pair_coeff 1 1 1.0 1.0 2.5 :pre pair_coeff 1 1 1.0 1.0 2.5 :pre
pair_style lj/cut/coul/long 10.0 pair_style lj/cut/coul/long 10.0
pair_style lj/cut/coul/long/cs 10.0
pair_style lj/cut/coul/long 10.0 8.0 pair_style lj/cut/coul/long 10.0 8.0
pair_style lj/cut/coul/long/cs 10.0 8.0
pair_coeff * * 100.0 3.0 pair_coeff * * 100.0 3.0
pair_coeff 1 1 100.0 3.5 9.0 :pre pair_coeff 1 1 100.0 3.5 9.0 :pre
@ -186,11 +183,6 @@ specified for this style means that pairwise interactions within this
distance are computed directly; interactions outside that distance are distance are computed directly; interactions outside that distance are
computed in reciprocal space. computed in reciprocal space.
Style {lj/cut/coul/long/cs} is identical to {lj/cut/coul/long} except
that a term is added for the "core/shell model"_Howto_coreshell.html
to allow charges on core and shell particles to be separated by r =
0.0.
Style {coul/wolf} adds a Coulombic pairwise interaction via the Wolf Style {coul/wolf} adds a Coulombic pairwise interaction via the Wolf
summation method, described in "Wolf"_#Wolf1, given by: summation method, described in "Wolf"_#Wolf1, given by:

View File

@ -95,120 +95,122 @@ GPUs, and KNLs. The individual style names on the "Commands
pair"_Commands_pair.html doc page are followed by one or more of pair"_Commands_pair.html doc page are followed by one or more of
(g,i,k,o,t) to indicate which accelerated styles exist. (g,i,k,o,t) to indicate which accelerated styles exist.
"pair_style none"_pair_none.html - turn off pairwise interactions "none"_pair_none.html - turn off pairwise interactions
"pair_style hybrid"_pair_hybrid.html - multiple styles of pairwise interactions "hybrid"_pair_hybrid.html - multiple styles of pairwise interactions
"pair_style hybrid/overlay"_pair_hybrid.html - multiple styles of superposed pairwise interactions "hybrid/overlay"_pair_hybrid.html - multiple styles of superposed pairwise interactions
"pair_style zero"_pair_zero.html - neighbor list but no interactions :ul "zero"_pair_zero.html - neighbor list but no interactions :ul
"pair_style adp"_pair_adp.html - angular dependent potential (ADP) of Mishin "adp"_pair_adp.html - angular dependent potential (ADP) of Mishin
"pair_style airebo"_pair_airebo.html - AIREBO potential of Stuart "airebo"_pair_airebo.html - AIREBO potential of Stuart
"pair_style airebo/morse"_pair_airebo.html - AIREBO with Morse instead of LJ "airebo/morse"_pair_airebo.html - AIREBO with Morse instead of LJ
"pair_style atm"_pair_atm.html - Axilrod-Teller-Muto potential "atm"_pair_atm.html - Axilrod-Teller-Muto potential
"pair_style beck"_pair_beck.html - Beck potential "beck"_pair_beck.html - Beck potential
"pair_style body/nparticle"_pair_body_nparticle.html - interactions between body particles "body/nparticle"_pair_body_nparticle.html - interactions between body particles
"pair_style bop"_pair_bop.html - BOP potential of Pettifor "bop"_pair_bop.html - BOP potential of Pettifor
"pair_style born"_pair_born.html - Born-Mayer-Huggins potential "born"_pair_born.html - Born-Mayer-Huggins potential
"pair_style born/coul/long"_pair_born.html - Born-Mayer-Huggins with long-range Coulombics "born/coul/long"_pair_born.html - Born-Mayer-Huggins with long-range Coulombics
"pair_style born/coul/long/cs"_pair_born.html - Born-Mayer-Huggins with long-range Coulombics and core/shell "born/coul/long/cs"_pair_cs.html - Born-Mayer-Huggins with long-range Coulombics and core/shell
"pair_style born/coul/msm"_pair_born.html - Born-Mayer-Huggins with long-range MSM Coulombics "born/coul/msm"_pair_born.html - Born-Mayer-Huggins with long-range MSM Coulombics
"pair_style born/coul/wolf"_pair_born.html - Born-Mayer-Huggins with Coulombics via Wolf potential "born/coul/wolf"_pair_born.html - Born-Mayer-Huggins with Coulombics via Wolf potential
"pair_style brownian"_pair_brownian.html - Brownian potential for Fast Lubrication Dynamics "brownian"_pair_brownian.html - Brownian potential for Fast Lubrication Dynamics
"pair_style brownian/poly"_pair_brownian.html - Brownian potential for Fast Lubrication Dynamics with polydispersity "brownian/poly"_pair_brownian.html - Brownian potential for Fast Lubrication Dynamics with polydispersity
"pair_style buck"_pair_buck.html - Buckingham potential "buck"_pair_buck.html - Buckingham potential
"pair_style buck/coul/cut"_pair_buck.html - Buckingham with cutoff Coulomb "buck/coul/cut"_pair_buck.html - Buckingham with cutoff Coulomb
"pair_style buck/coul/long"_pair_buck.html - Buckingham with long-range Coulombics "buck/coul/long"_pair_buck.html - Buckingham with long-range Coulombics
"pair_style buck/coul/long/cs"_pair_buck.html - Buckingham with long-range Coulombics and core/shell "buck/coul/long/cs"_pair_cs.html - Buckingham with long-range Coulombics and core/shell
"pair_style buck/coul/msm"_pair_buck.html - Buckingham long-range MSM Coulombics "buck/coul/msm"_pair_buck.html - Buckingham long-range MSM Coulombics
"pair_style buck/long/coul/long"_pair_buck_long.html - long-range Buckingham with long-range Coulombics "buck/long/coul/long"_pair_buck_long.html - long-range Buckingham with long-range Coulombics
"pair_style colloid"_pair_colloid.html - integrated colloidal potential "buck6d/coul/gauss/dsf"_pair_buck6d_coul_gauss.html -
"pair_style comb"_pair_comb.html - charge-optimized many-body (COMB) potential "buck6d/coul/gauss/long"_pair_buck6d_coul_gauss.html -
"pair_style comb3"_pair_comb.html - charge-optimized many-body (COMB3) potential "colloid"_pair_colloid.html - integrated colloidal potential
"pair_style coul/cut"_pair_coul.html - cutoff Coulombic potential "comb"_pair_comb.html - charge-optimized many-body (COMB) potential
"pair_style coul/debye"_pair_coul.html - cutoff Coulombic potential with Debye screening "comb3"_pair_comb.html - charge-optimized many-body (COMB3) potential
"pair_style coul/dsf"_pair_coul.html - Coulombics via damped shifted forces "coul/cut"_pair_coul.html - cutoff Coulombic potential
"pair_style coul/long"_pair_coul.html - long-range Coulombic potential "coul/debye"_pair_coul.html - cutoff Coulombic potential with Debye screening
"pair_style coul/long/cs"_pair_coul.html - long-range Coulombic potential and core/shell "coul/dsf"_pair_coul.html - Coulombics via damped shifted forces
"pair_style coul/msm"_pair_coul.html - long-range MSM Coulombics "coul/long"_pair_coul.html - long-range Coulombic potential
"pair_style coul/streitz"_pair_coul.html - Coulombics via Streitz/Mintmire Slater orbitals "coul/long/cs"_pair_cs.html - long-range Coulombic potential and core/shell
"pair_style coul/wolf"_pair_coul.html - Coulombics via Wolf potential "coul/msm"_pair_coul.html - long-range MSM Coulombics
"pair_style dpd"_pair_dpd.html - dissipative particle dynamics (DPD) "coul/streitz"_pair_coul.html - Coulombics via Streitz/Mintmire Slater orbitals
"pair_style dpd/tstat"_pair_dpd.html - DPD thermostatting "coul/wolf"_pair_coul.html - Coulombics via Wolf potential
"pair_style dsmc"_pair_dsmc.html - Direct Simulation Monte Carlo (DSMC) "dpd"_pair_dpd.html - dissipative particle dynamics (DPD)
"pair_style eam"_pair_eam.html - embedded atom method (EAM) "dpd/tstat"_pair_dpd.html - DPD thermostatting
"pair_style eam/alloy"_pair_eam.html - alloy EAM "dsmc"_pair_dsmc.html - Direct Simulation Monte Carlo (DSMC)
"pair_style eam/fs"_pair_eam.html - Finnis-Sinclair EAM "eam"_pair_eam.html - embedded atom method (EAM)
"pair_style eim"_pair_eim.html - embedded ion method (EIM) "eam/alloy"_pair_eam.html - alloy EAM
"pair_style gauss"_pair_gauss.html - Gaussian potential "eam/fs"_pair_eam.html - Finnis-Sinclair EAM
"pair_style gayberne"_pair_gayberne.html - Gay-Berne ellipsoidal potential "eim"_pair_eim.html - embedded ion method (EIM)
"pair_style gran/hertz/history"_pair_gran.html - granular potential with Hertzian interactions "gauss"_pair_gauss.html - Gaussian potential
"pair_style gran/hooke"_pair_gran.html - granular potential with history effects "gayberne"_pair_gayberne.html - Gay-Berne ellipsoidal potential
"pair_style gran/hooke/history"_pair_gran.html - granular potential without history effects "gran/hertz/history"_pair_gran.html - granular potential with Hertzian interactions
"pair_style hbond/dreiding/lj"_pair_hbond_dreiding.html - DREIDING hydrogen bonding LJ potential "gran/hooke"_pair_gran.html - granular potential with history effects
"pair_style hbond/dreiding/morse"_pair_hbond_dreiding.html - DREIDING hydrogen bonding Morse potential "gran/hooke/history"_pair_gran.html - granular potential without history effects
"pair_style kim"_pair_kim.html - interface to potentials provided by KIM project "hbond/dreiding/lj"_pair_hbond_dreiding.html - DREIDING hydrogen bonding LJ potential
"pair_style lcbop"_pair_lcbop.html - long-range bond-order potential (LCBOP) "hbond/dreiding/morse"_pair_hbond_dreiding.html - DREIDING hydrogen bonding Morse potential
"pair_style line/lj"_pair_line_lj.html - LJ potential between line segments "kim"_pair_kim.html - interface to potentials provided by KIM project
"pair_style lj/charmm/coul/charmm"_pair_charmm.html - CHARMM potential with cutoff Coulomb "lcbop"_pair_lcbop.html - long-range bond-order potential (LCBOP)
"pair_style lj/charmm/coul/charmm/implicit"_pair_charmm.html - CHARMM for implicit solvent "line/lj"_pair_line_lj.html - LJ potential between line segments
"pair_style lj/charmm/coul/long"_pair_charmm.html - CHARMM with long-range Coulomb "lj/charmm/coul/charmm"_pair_charmm.html - CHARMM potential with cutoff Coulomb
"pair_style lj/charmm/coul/msm"_pair_charmm.html - CHARMM with long-range MSM Coulombics "lj/charmm/coul/charmm/implicit"_pair_charmm.html - CHARMM for implicit solvent
"pair_style lj/class2"_pair_class2.html - COMPASS (class 2) force field with no Coulomb "lj/charmm/coul/long"_pair_charmm.html - CHARMM with long-range Coulomb
"pair_style lj/class2/coul/cut"_pair_class2.html - COMPASS with cutoff Coulomb "lj/charmm/coul/msm"_pair_charmm.html - CHARMM with long-range MSM Coulombics
"pair_style lj/class2/coul/long"_pair_class2.html - COMPASS with long-range Coulomb "lj/class2"_pair_class2.html - COMPASS (class 2) force field with no Coulomb
"pair_style lj/cubic"_pair_lj_cubic.html - LJ with cubic after inflection point "lj/class2/coul/cut"_pair_class2.html - COMPASS with cutoff Coulomb
"pair_style lj/cut"_pair_lj.html - cutoff Lennard-Jones potential with no Coulomb "lj/class2/coul/long"_pair_class2.html - COMPASS with long-range Coulomb
"pair_style lj/cut/coul/cut"_pair_lj.html - LJ with cutoff Coulomb "lj/cubic"_pair_lj_cubic.html - LJ with cubic after inflection point
"pair_style lj/cut/coul/debye"_pair_lj.html - LJ with Debye screening added to Coulomb "lj/cut"_pair_lj.html - cutoff Lennard-Jones potential with no Coulomb
"pair_style lj/cut/coul/dsf"_pair_lj.html - LJ with Coulombics via damped shifted forces "lj/cut/coul/cut"_pair_lj.html - LJ with cutoff Coulomb
"pair_style lj/cut/coul/long"_pair_lj.html - LJ with long-range Coulombics "lj/cut/coul/debye"_pair_lj.html - LJ with Debye screening added to Coulomb
"pair_style lj/cut/coul/long/cs"_pair_lj.html - LJ with long-range Coulombics and core/shell "lj/cut/coul/dsf"_pair_lj.html - LJ with Coulombics via damped shifted forces
"pair_style lj/cut/coul/msm"_pair_lj.html - LJ with long-range MSM Coulombics "lj/cut/coul/long"_pair_lj.html - LJ with long-range Coulombics
"pair_style lj/cut/dipole/cut"_pair_dipole.html - point dipoles with cutoff "lj/cut/coul/long/cs"_pair_lj.html - LJ with long-range Coulombics and core/shell
"pair_style lj/cut/dipole/long"_pair_dipole.html - point dipoles with long-range Ewald "lj/cut/coul/msm"_pair_lj.html - LJ with long-range MSM Coulombics
"pair_style lj/cut/tip4p/cut"_pair_lj.html - LJ with cutoff Coulomb for TIP4P water "lj/cut/dipole/cut"_pair_dipole.html - point dipoles with cutoff
"pair_style lj/cut/tip4p/long"_pair_lj.html - LJ with long-range Coulomb for TIP4P water "lj/cut/dipole/long"_pair_dipole.html - point dipoles with long-range Ewald
"pair_style lj/expand"_pair_lj_expand.html - Lennard-Jones for variable size particles "lj/cut/tip4p/cut"_pair_lj.html - LJ with cutoff Coulomb for TIP4P water
"pair_style lj/gromacs"_pair_gromacs.html - GROMACS-style Lennard-Jones potential "lj/cut/tip4p/long"_pair_lj.html - LJ with long-range Coulomb for TIP4P water
"pair_style lj/gromacs/coul/gromacs"_pair_gromacs.html - GROMACS-style LJ and Coulombic potential "lj/expand"_pair_lj_expand.html - Lennard-Jones for variable size particles
"pair_style lj/long/coul/long"_pair_lj_long.html - long-range LJ and long-range Coulombics "lj/gromacs"_pair_gromacs.html - GROMACS-style Lennard-Jones potential
"pair_style lj/long/dipole/long"_pair_dipole.html - long-range LJ and long-range point dipoles "lj/gromacs/coul/gromacs"_pair_gromacs.html - GROMACS-style LJ and Coulombic potential
"pair_style lj/long/tip4p/long"_pair_lj_long.html - long-range LJ and long-range Coulomb for TIP4P water "lj/long/coul/long"_pair_lj_long.html - long-range LJ and long-range Coulombics
"pair_style lj/smooth"_pair_lj_smooth.html - smoothed Lennard-Jones potential "lj/long/dipole/long"_pair_dipole.html - long-range LJ and long-range point dipoles
"pair_style lj/smooth/linear"_pair_lj_smooth_linear.html - linear smoothed Lennard-Jones potential "lj/long/tip4p/long"_pair_lj_long.html - long-range LJ and long-range Coulomb for TIP4P water
"pair_style lj96/cut"_pair_lj96.html - Lennard-Jones 9/6 potential "lj/smooth"_pair_lj_smooth.html - smoothed Lennard-Jones potential
"pair_style lubricate"_pair_lubricate.html - hydrodynamic lubrication forces "lj/smooth/linear"_pair_lj_smooth_linear.html - linear smoothed Lennard-Jones potential
"pair_style lubricate/poly"_pair_lubricate.html - hydrodynamic lubrication forces with polydispersity "lj96/cut"_pair_lj96.html - Lennard-Jones 9/6 potential
"pair_style lubricateU"_pair_lubricateU.html - hydrodynamic lubrication forces for Fast Lubrication Dynamics "lubricate"_pair_lubricate.html - hydrodynamic lubrication forces
"pair_style lubricateU/poly"_pair_lubricateU.html - hydrodynamic lubrication forces for Fast Lubrication with polydispersity "lubricate/poly"_pair_lubricate.html - hydrodynamic lubrication forces with polydispersity
"pair_style meam"_pair_meam.html - modified embedded atom method (MEAM) "lubricateU"_pair_lubricateU.html - hydrodynamic lubrication forces for Fast Lubrication Dynamics
"pair_style mie/cut"_pair_mie.html - Mie potential "lubricateU/poly"_pair_lubricateU.html - hydrodynamic lubrication forces for Fast Lubrication with polydispersity
"pair_style morse"_pair_morse.html - Morse potential "meam"_pair_meam.html - modified embedded atom method (MEAM)
"pair_style nb3b/harmonic"_pair_nb3b_harmonic.html - nonbonded 3-body harmonic potential "mie/cut"_pair_mie.html - Mie potential
"pair_style nm/cut"_pair_nm.html - N-M potential "morse"_pair_morse.html - Morse potential
"pair_style nm/cut/coul/cut"_pair_nm.html - N-M potential with cutoff Coulomb "nb3b/harmonic"_pair_nb3b_harmonic.html - nonbonded 3-body harmonic potential
"pair_style nm/cut/coul/long"_pair_nm.html - N-M potential with long-range Coulombics "nm/cut"_pair_nm.html - N-M potential
"pair_style peri/eps"_pair_peri.html - peridynamic EPS potential "nm/cut/coul/cut"_pair_nm.html - N-M potential with cutoff Coulomb
"pair_style peri/lps"_pair_peri.html - peridynamic LPS potential "nm/cut/coul/long"_pair_nm.html - N-M potential with long-range Coulombics
"pair_style peri/pmb"_pair_peri.html - peridynamic PMB potential "peri/eps"_pair_peri.html - peridynamic EPS potential
"pair_style peri/ves"_pair_peri.html - peridynamic VES potential "peri/lps"_pair_peri.html - peridynamic LPS potential
"pair_style polymorphic"_pair_polymorphic.html - polymorphic 3-body potential "peri/pmb"_pair_peri.html - peridynamic PMB potential
"pair_style reax"_pair_reax.html - ReaxFF potential "peri/ves"_pair_peri.html - peridynamic VES potential
"pair_style rebo"_pair_airebo.html - 2nd generation REBO potential of Brenner "polymorphic"_pair_polymorphic.html - polymorphic 3-body potential
"pair_style resquared"_pair_resquared.html - Everaers RE-Squared ellipsoidal potential "reax"_pair_reax.html - ReaxFF potential
"pair_style snap"_pair_snap.html - SNAP quantum-accurate potential "rebo"_pair_airebo.html - 2nd generation REBO potential of Brenner
"pair_style soft"_pair_soft.html - Soft (cosine) potential "resquared"_pair_resquared.html - Everaers RE-Squared ellipsoidal potential
"pair_style sw"_pair_sw.html - Stillinger-Weber 3-body potential "snap"_pair_snap.html - SNAP quantum-accurate potential
"pair_style table"_pair_table.html - tabulated pair potential "soft"_pair_soft.html - Soft (cosine) potential
"pair_style tersoff"_pair_tersoff.html - Tersoff 3-body potential "sw"_pair_sw.html - Stillinger-Weber 3-body potential
"pair_style tersoff/mod"_pair_tersoff_mod.html - modified Tersoff 3-body potential "table"_pair_table.html - tabulated pair potential
"pair_style tersoff/zbl"_pair_tersoff_zbl.html - Tersoff/ZBL 3-body potential "tersoff"_pair_tersoff.html - Tersoff 3-body potential
"pair_style tip4p/cut"_pair_coul.html - Coulomb for TIP4P water w/out LJ "tersoff/mod"_pair_tersoff_mod.html - modified Tersoff 3-body potential
"pair_style tip4p/long"_pair_coul.html - long-range Coulombics for TIP4P water w/out LJ "tersoff/zbl"_pair_tersoff_zbl.html - Tersoff/ZBL 3-body potential
"pair_style tri/lj"_pair_tri_lj.html - LJ potential between triangles "tip4p/cut"_pair_coul.html - Coulomb for TIP4P water w/out LJ
"pair_style vashishta"_pair_vashishta.html - Vashishta 2-body and 3-body potential "tip4p/long"_pair_coul.html - long-range Coulombics for TIP4P water w/out LJ
"pair_style yukawa"_pair_yukawa.html - Yukawa potential "tri/lj"_pair_tri_lj.html - LJ potential between triangles
"pair_style yukawa/colloid"_pair_yukawa_colloid.html - screened Yukawa potential for finite-size particles "vashishta"_pair_vashishta.html - Vashishta 2-body and 3-body potential
"pair_style zbl"_pair_zbl.html - Ziegler-Biersack-Littmark potential :ul "yukawa"_pair_yukawa.html - Yukawa potential
"yukawa/colloid"_pair_yukawa_colloid.html - screened Yukawa potential for finite-size particles
"zbl"_pair_zbl.html - Ziegler-Biersack-Littmark potential :ul
:line :line