jianmu
/
lammps
forked from lijiext/lammps
1
0
Fork 0
Code Issues Pull Requests Packages Projects Releases Wiki Activity

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11842 f3b2605a-c512-4ea7-a41b-209d697bcdaa

This commit is contained in:
sjplimp 2014-04-29 23:10:42 +00:00
parent f3e58c8d0a
commit 99f44f64cc
2 changed files with 46 additions and 41 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

8
lib/gpu/lal_sw.cpp
View File

@ -112,8 +112,12 @@ int SWT::init(const int ntypes, const int nlocal, const int nall, const int max_
sw3.alloc(nparams,*(this->ucl_device),UCL_READ_ONLY);
for (int i=0; i<nparams; i++) {
dview[i].x=static_cast<numtyp>(cut[i]);
dview[i].y=static_cast<numtyp>(cutsq[i]);
double sw_cut = cut[i];
double sw_cutsq = cutsq[i];
if (sw_cutsq>=sw_cut*sw_cut)
sw_cutsq=sw_cut*sw_cut-1e-4;
dview[i].x=static_cast<numtyp>(sw_cut);
dview[i].y=static_cast<numtyp>(sw_cutsq);
dview[i].z=static_cast<numtyp>(costheta[i]);
dview[i].w=(numtyp)0;
}

79
lib/gpu/lal_sw.cu
View File

@ -195,17 +195,17 @@ __kernel void k_sw(const __global numtyp4 *restrict x_,
numtyp sw_cut=sw3_ijparam.x;
numtyp sw_cutsq=sw3_ijparam.y;
numtyp pre_sw_c1=sw_biga*sw_epsilon*sw_powerp*sw_bigb*
pow(sw_sigma,sw_powerp);
ucl_powr(sw_sigma,sw_powerp);
numtyp pre_sw_c2=sw_biga*sw_epsilon*sw_powerq*
pow(sw_sigma,sw_powerq);
ucl_powr(sw_sigma,sw_powerq);
numtyp pre_sw_c3=sw_biga*sw_epsilon*sw_bigb*
pow(sw_sigma,sw_powerp+(numtyp)1.0);
ucl_powr(sw_sigma,sw_powerp+(numtyp)1.0);
numtyp pre_sw_c4=sw_biga*sw_epsilon*
pow(sw_sigma,sw_powerq+(numtyp)1.0);
ucl_powr(sw_sigma,sw_powerq+(numtyp)1.0);
numtyp pre_sw_c5=sw_biga*sw_epsilon*sw_bigb*
pow(sw_sigma,sw_powerp);
ucl_powr(sw_sigma,sw_powerp);
numtyp pre_sw_c6=sw_biga*sw_epsilon*
pow(sw_sigma,sw_powerq);
ucl_powr(sw_sigma,sw_powerq);
numtyp r=ucl_sqrt(rsq);
numtyp rp=ucl_powr(r,-sw_powerp);
@ -343,7 +343,6 @@ __kernel void k_sw_three_center(const __global numtyp4 *restrict x_,
const int t_per_atom, const int evatom) {
__local int tpa_sq, n_stride;
tpa_sq=fast_mul(t_per_atom,t_per_atom);
numtyp sw_epsilon, sw_sigma, sw_lambda, sw_gamma;
numtyp sw_sigma_gamma_ij, sw_cut_ij, sw_sigma_gamma_ik, sw_cut_ik;
numtyp sw_costheta_ijk, sw_lambda_epsilon_ijk, sw_lambda_epsilon2_ijk;
@ -467,7 +466,6 @@ __kernel void k_sw_three_end(const __global numtyp4 *restrict x_,
const int t_per_atom) {
__local int tpa_sq, n_stride;
tpa_sq=fast_mul(t_per_atom,t_per_atom);
numtyp sw_epsilon, sw_sigma, sw_lambda, sw_gamma;
numtyp sw_sigma_gamma_ij, sw_cut_ij, sw_sigma_gamma_ik, sw_cut_ik;
numtyp sw_costheta_ijk, sw_lambda_epsilon_ijk, sw_lambda_epsilon2_ijk;
@ -515,12 +513,14 @@ __kernel void k_sw_three_end(const __global numtyp4 *restrict x_,
if (rsq1 > sw3_ijparam.y) continue;
numtyp4 sw1_ijparam; fetch4(sw1_ijparam,ijparam,sw1_tex);
sw_sigma_gamma_ij=sw1_ijparam.y*sw1_ijparam.w; //sw_sigma*sw_gamma;
sw_cut_ij=sw3_ijparam.x;
int jiparam=elem2param[jtype*nelements*nelements+itype*nelements+itype];
numtyp4 sw1_jiparam; fetch4(sw1_jiparam,jiparam,sw1_tex);
numtyp4 sw3_jiparam; fetch4(sw3_jiparam,jiparam,sw3_tex);
sw_sigma_gamma_ij=sw1_jiparam.y*sw1_jiparam.w; //sw_sigma*sw_gamma;
sw_cut_ij=sw3_jiparam.x;
const __global int *nbor_k=dev_nbor+j+nbor_pitch;
int numk=*nbor_k;
int numk=*nbor_k;
if (dev_nbor==dev_packed) {
nbor_k+=nbor_pitch+fast_mul(j,t_per_atom-1);
k_end=nbor_k+fast_mul(numk/t_per_atom,n_stride)+(numk & (t_per_atom-1));
@ -541,25 +541,25 @@ __kernel void k_sw_three_end(const __global numtyp4 *restrict x_,
numtyp4 kx; fetch4(kx,k,pos_tex);
int ktype=kx.w;
ktype=map[ktype];
int ikparam=elem2param[itype*nelements*nelements+ktype*nelements+ktype];
int jkparam=elem2param[jtype*nelements*nelements+ktype*nelements+ktype];
numtyp delr2x = kx.x - jx.x;
numtyp delr2y = kx.y - jx.y;
numtyp delr2z = kx.z - jx.z;
numtyp rsq2 = delr2x*delr2x + delr2y*delr2y + delr2z*delr2z;
numtyp4 sw3_ikparam; fetch4(sw3_ikparam,ikparam,sw3_tex);
numtyp4 sw3_jkparam; fetch4(sw3_jkparam,jkparam,sw3_tex);
if (rsq2 < sw3_ikparam.y) {
numtyp4 sw1_ikparam; fetch4(sw1_ikparam,ikparam,sw1_tex);
sw_sigma_gamma_ik=sw1_ikparam.y*sw1_ikparam.w; //sw_sigma*sw_gamma;
sw_cut_ik=sw3_ikparam.x;
if (rsq2 < sw3_jkparam.y) {
numtyp4 sw1_jkparam; fetch4(sw1_jkparam,jkparam,sw1_tex);
sw_sigma_gamma_ik=sw1_jkparam.y*sw1_jkparam.w; //sw_sigma*sw_gamma;
sw_cut_ik=sw3_jkparam.x;
int ijkparam=elem2param[itype*nelements*nelements+jtype*nelements+ktype];
numtyp4 sw1_ijkparam; fetch4(sw1_ijkparam,ijkparam,sw1_tex);
sw_lambda_epsilon_ijk=sw1_ijkparam.x*sw1_ijkparam.z; //sw_lambda*sw_epsilon;
int jikparam=elem2param[jtype*nelements*nelements+itype*nelements+ktype];
numtyp4 sw1_jikparam; fetch4(sw1_jikparam,jikparam,sw1_tex);
sw_lambda_epsilon_ijk=sw1_jikparam.x*sw1_jikparam.z; //sw_lambda*sw_epsilon;
sw_lambda_epsilon2_ijk=(numtyp)2.0*sw_lambda_epsilon_ijk;
numtyp4 sw3_ijkparam; fetch4(sw3_ijkparam,ijkparam,sw3_tex);
sw_costheta_ijk=sw3_ijkparam.z;
numtyp4 sw3_jikparam; fetch4(sw3_jikparam,jikparam,sw3_tex);
sw_costheta_ijk=sw3_jikparam.z;
numtyp fjx, fjy, fjz;
//if (evatom==0) {
@ -602,7 +602,6 @@ __kernel void k_sw_three_end_vatom(const __global numtyp4 *restrict x_,
const int t_per_atom) {
__local int tpa_sq, n_stride;
tpa_sq=fast_mul(t_per_atom,t_per_atom);
numtyp sw_epsilon, sw_sigma, sw_lambda, sw_gamma;
numtyp sw_sigma_gamma_ij, sw_cut_ij, sw_sigma_gamma_ik, sw_cut_ik;
numtyp sw_costheta_ijk, sw_lambda_epsilon_ijk, sw_lambda_epsilon2_ijk;
@ -650,10 +649,12 @@ __kernel void k_sw_three_end_vatom(const __global numtyp4 *restrict x_,
if (rsq1 > sw3_ijparam.y) continue;
numtyp4 sw1_ijparam; fetch4(sw1_ijparam,ijparam,sw1_tex);
sw_sigma_gamma_ij=sw1_ijparam.y*sw1_ijparam.w; //sw_sigma*sw_gamma;
sw_cut_ij=sw3_ijparam.x;
int jiparam=elem2param[jtype*nelements*nelements+itype*nelements+itype];
numtyp4 sw1_jiparam; fetch4(sw1_jiparam,jiparam,sw1_tex);
numtyp4 sw3_jiparam; fetch4(sw3_jiparam,jiparam,sw3_tex);
sw_sigma_gamma_ij=sw1_jiparam.y*sw1_jiparam.w; //sw_sigma*sw_gamma;
sw_cut_ij=sw3_jiparam.x;
const __global int *nbor_k=dev_nbor+j+nbor_pitch;
int numk=*nbor_k;
if (dev_nbor==dev_packed) {
@ -676,25 +677,25 @@ __kernel void k_sw_three_end_vatom(const __global numtyp4 *restrict x_,
numtyp4 kx; fetch4(kx,k,pos_tex);
int ktype=kx.w;
ktype=map[ktype];
int ikparam=elem2param[itype*nelements*nelements+ktype*nelements+ktype];
numtyp4 sw3_ikparam; fetch4(sw3_ikparam,ikparam,sw3_tex);
int jkparam=elem2param[jtype*nelements*nelements+ktype*nelements+ktype];
numtyp4 sw3_jkparam; fetch4(sw3_jkparam,jkparam,sw3_tex);
numtyp delr2x = kx.x - jx.x;
numtyp delr2y = kx.y - jx.y;
numtyp delr2z = kx.z - jx.z;
numtyp rsq2 = delr2x*delr2x + delr2y*delr2y + delr2z*delr2z;
if (rsq2 < sw3_ikparam.y) {
numtyp4 sw1_ikparam; fetch4(sw1_ikparam,ikparam,sw1_tex);
sw_sigma_gamma_ik=sw1_ikparam.y*sw1_ikparam.w; //sw_sigma*sw_gamma;
sw_cut_ik=sw3_ikparam.x;
if (rsq2 < sw3_jkparam.y) {
numtyp4 sw1_jkparam; fetch4(sw1_jkparam,jkparam,sw1_tex);
sw_sigma_gamma_ik=sw1_jkparam.y*sw1_jkparam.w; //sw_sigma*sw_gamma;
sw_cut_ik=sw3_jkparam.x;
int ijkparam=elem2param[itype*nelements*nelements+jtype*nelements+ktype];
numtyp4 sw1_ijkparam; fetch4(sw1_ijkparam,ijkparam,sw1_tex);
sw_lambda_epsilon_ijk=sw1_ijkparam.x*sw1_ijkparam.z; //sw_lambda*sw_epsilon;
int jikparam=elem2param[jtype*nelements*nelements+itype*nelements+ktype];
numtyp4 sw1_jikparam; fetch4(sw1_jikparam,jikparam,sw1_tex);
sw_lambda_epsilon_ijk=sw1_jikparam.x*sw1_jikparam.z; //sw_lambda*sw_epsilon;
sw_lambda_epsilon2_ijk=(numtyp)2.0*sw_lambda_epsilon_ijk;
numtyp4 sw3_ijkparam; fetch4(sw3_ijkparam,ijkparam,sw3_tex);
sw_costheta_ijk=sw3_ijkparam.z;
numtyp4 sw3_jikparam; fetch4(sw3_jikparam,jikparam,sw3_tex);
sw_costheta_ijk=sw3_jikparam.z;
numtyp fjx, fjy, fjz, fkx, fky, fkz;
threebody(delr1x,delr1y,delr1z,eflag,energy);