Adding a method for estimating coulomb table precision and factoring that into overall kspace precision estimate.

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8453 f3b2605a-c512-4ea7-a41b-209d697bcdaa
This commit is contained in:
pscrozi 2012-06-29 22:49:51 +00:00
parent 0c9ab4551e
commit 71f4cdf3f1
5 changed files with 52 additions and 9 deletions

View File

@ -176,6 +176,8 @@ void Ewald::init()
double lpr = sqrt(lprx*lprx + lpry*lpry + lprz*lprz) / sqrt(3.0);
double spr = 2.0*q2 * exp(-g_ewald*g_ewald*cutoff*cutoff) /
sqrt(natoms*cutoff*xprd*yprd*zprd_slab);
double tpr = estimate_table_accuracy(spr);
double accuracy = sqrt(lpr*lpr + spr*spr + tpr*tpr);
// stats
@ -183,18 +185,18 @@ void Ewald::init()
if (screen) {
fprintf(screen," G vector (1/distance) = %g\n",g_ewald);
fprintf(screen," estimated absolute RMS force accuracy = %g\n",
MAX(lpr,spr));
accuracy);
fprintf(screen," estimated relative force accuracy = %g\n",
MAX(lpr,spr)/two_charge_force);
accuracy/two_charge_force);
fprintf(screen," KSpace vectors: actual max1d max3d = %d %d %d\n",
kcount,kmax,kmax3d);
}
if (logfile) {
fprintf(logfile," G vector (1/distnace) = %g\n",g_ewald);
fprintf(logfile," estimated absolute RMS force accuracy = %g\n",
MAX(lpr,spr));
accuracy);
fprintf(logfile," estimated relative force accuracy = %g\n",
MAX(lpr,spr)/two_charge_force);
accuracy/two_charge_force);
fprintf(logfile," KSpace vectors: actual max1d max3d = %d %d %d\n",
kcount,kmax,kmax3d);
}

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@ -1091,6 +1091,8 @@ void PPPM::set_grid()
double lpr = sqrt(lprx*lprx + lpry*lpry + lprz*lprz) / sqrt(3.0);
double spr = 2.0*q2 * exp(-g_ewald*g_ewald*cutoff*cutoff) /
sqrt(natoms*cutoff*xprd*yprd*zprd_slab);
double tpr = estimate_table_accuracy(spr);
double accuracy = sqrt(lpr*lpr + spr*spr + tpr*tpr);
// free local memory
@ -1109,9 +1111,9 @@ void PPPM::set_grid()
fprintf(screen," grid = %d %d %d\n",nx_pppm,ny_pppm,nz_pppm);
fprintf(screen," stencil order = %d\n",order);
fprintf(screen," estimated absolute RMS force accuracy = %g\n",
MAX(lpr,spr));
accuracy);
fprintf(screen," estimated relative force accuracy = %g\n",
MAX(lpr,spr)/two_charge_force);
accuracy/two_charge_force);
fprintf(screen," using %s precision FFTs\n",fft_prec);
}
if (logfile) {
@ -1119,9 +1121,9 @@ void PPPM::set_grid()
fprintf(logfile," grid = %d %d %d\n",nx_pppm,ny_pppm,nz_pppm);
fprintf(logfile," stencil order = %d\n",order);
fprintf(logfile," estimated absolute RMS force accuracy = %g\n",
MAX(lpr,spr));
accuracy);
fprintf(logfile," estimated relative force accuracy = %g\n",
MAX(lpr,spr)/two_charge_force);
accuracy/two_charge_force);
fprintf(logfile," using %s precision FFTs\n",fft_prec);
}
}

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@ -17,6 +17,7 @@
#include "atom.h"
#include "comm.h"
#include "force.h"
#include "pair.h"
#include "memory.h"
#include "error.h"
#include "suffix.h"
@ -124,6 +125,37 @@ void KSpace::ev_setup(int eflag, int vflag)
}
}
/* ----------------------------------------------------------------------
estimate the accuracy of the short-range coulomb tables
------------------------------------------------------------------------- */
double KSpace::estimate_table_accuracy(double spr)
{
double table_accuracy = 0.0;
int nctb = force->pair->ncoultablebits;
if (nctb) {
double empirical_precision[17];
empirical_precision[6] = 2.12E-04;
empirical_precision[7] = 4.97E-05;
empirical_precision[8] = 1.24E-05;
empirical_precision[9] = 3.04E-06;
empirical_precision[10] = 8.51E-07;
empirical_precision[11] = 1.85E-07;
empirical_precision[12] = 5.87E-08;
empirical_precision[13] = 2.81E-08;
empirical_precision[14] = 2.20E-08;
empirical_precision[15] = 2.13E-08;
empirical_precision[16] = 2.11E-08;
if (nctb <= 6) table_accuracy = empirical_precision[6];
else if (nctb <= 16) table_accuracy = empirical_precision[nctb];
else table_accuracy = empirical_precision[16];
table_accuracy *= two_charge_force;
if (table_accuracy > spr)
error->warning(FLERR,"For better accuracy use 'pair_modify table 0'");
}
return table_accuracy;
}
/* ----------------------------------------------------------------------
modify parameters of the KSpace style
------------------------------------------------------------------------- */

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@ -70,6 +70,7 @@ class KSpace : protected Pointers {
int maxeatom,maxvatom;
void ev_setup(int, int);
double estimate_table_accuracy(double);
};
}
@ -93,4 +94,9 @@ W: Kspace_modify slab param < 2.0 may cause unphysical behavior
The kspace_modify slab parameter should be larger to insure periodic
grids padded with empty space do not overlap.
W: For better accuracy use 'pair_modify table 0'
The user-specified force accuracy cannot be achieved unless the table
feature is disabled by using 'pair_modify table 0'.
*/

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@ -57,6 +57,8 @@ class Pair : protected Pointers {
int evflag; // energy,virial settings
int eflag_either,eflag_global,eflag_atom;
int vflag_either,vflag_global,vflag_atom;
int ncoultablebits; // size of Coulomb table
int nextra; // # of extra quantities pair style calculates
double *pvector; // vector of extra pair quantities
@ -146,7 +148,6 @@ class Pair : protected Pointers {
// pair_modify settings
int offset_flag,mix_flag; // flags for offset and mixing
int ncoultablebits; // size of Coulomb table
double tabinner; // inner cutoff for Coulomb table
// custom data type for accessing Coulomb tables