git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11673 f3b2605a-c512-4ea7-a41b-209d697bcdaa

doc/Section_accelerate.html

@@ -345,9 +345,10 @@ examples are <A HREF = "http://sites.google.com/site/akohlmey/software/lammps-ic
 
 <H4><A NAME = "acc_6"></A>5.6 GPU package 
 </H4>
-<P>The GPU package was developed by Mike Brown at ORNL.  It provides GPU
-versions of several pair styles and for long-range Coulombics via the
-PPPM command.  It has the following features:
+<P>The GPU package was developed by Mike Brown at ORNL and his
+collaborators.  It provides GPU versions of several pair styles,
+including the 3-body Stillinger-Weber pair style, and for long-range
+Coulombics via the PPPM command.  It has the following features:
 </P>
 <UL><LI>The package is designed to exploit common GPU hardware configurations
 where one or more GPUs are coupled with many cores of a multi-core

doc/Section_accelerate.txt

@@ -341,9 +341,10 @@ examples are "presented here"_http://sites.google.com/site/akohlmey/software/lam
 
 5.6 GPU package :h4,link(acc_6)
 
-The GPU package was developed by Mike Brown at ORNL.  It provides GPU
-versions of several pair styles and for long-range Coulombics via the
-PPPM command.  It has the following features:
+The GPU package was developed by Mike Brown at ORNL and his
+collaborators.  It provides GPU versions of several pair styles,
+including the 3-body Stillinger-Weber pair style, and for long-range
+Coulombics via the PPPM command.  It has the following features:
 
 The package is designed to exploit common GPU hardware configurations
 where one or more GPUs are coupled with many cores of a multi-core

doc/Section_howto.html

@@ -312,6 +312,7 @@ velocity all create $t 352839
 fix 1 all nvt $t $t 100.0
 dump 1 all atom 1000 dump.$a
 run 100000
+clear
 next t
 next a
 jump in.polymer 

doc/Section_howto.txt

@@ -307,6 +307,7 @@ velocity all create $t 352839
 fix 1 all nvt $t $t 100.0
 dump 1 all atom 1000 dump.$a
 run 100000
+clear
 next t
 next a
 jump in.polymer :pre

doc/delete_atoms.html

@@ -93,7 +93,9 @@ has already been assigned.
 deleted, all other atoms in the same molecule will also be deleted.
 This keyword is only used by the <I>region</I> style.  It is a way to
 insure that entire molecules are deleted instead of only a subset of
-atoms in a bond or angle or dihedral interaction.
+atoms in the molecule which will typically lead to errors because of
+bond, angle, or dihedral interactions stored by remaining atoms which
+reference deleted atoms.
 </P>
 <P><B>Restrictions:</B>
 </P>

doc/delete_atoms.txt

@@ -85,7 +85,9 @@ It the {mol} keyword is set to {yes}, then for every atom that is
 deleted, all other atoms in the same molecule will also be deleted.
 This keyword is only used by the {region} style.  It is a way to
 insure that entire molecules are deleted instead of only a subset of
-atoms in a bond or angle or dihedral interaction.
+atoms in the molecule which will typically lead to errors because of
+bond, angle, or dihedral interactions stored by remaining atoms which
+reference deleted atoms.
 
 [Restrictions:]