From 37bfe6ac0e4baae1cb38db6fe9f7f7952f3e3dc7 Mon Sep 17 00:00:00 2001 From: sjplimp Date: Fri, 8 Feb 2008 20:00:41 +0000 Subject: [PATCH] git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@1471 f3b2605a-c512-4ea7-a41b-209d697bcdaa --- doc/fix_langevin.html | 16 ++++++++++++++-- doc/fix_langevin.txt | 16 ++++++++++++++-- 2 files changed, 28 insertions(+), 4 deletions(-) diff --git a/doc/fix_langevin.html b/doc/fix_langevin.html index 4498d1b134..f6dab7e411 100644 --- a/doc/fix_langevin.html +++ b/doc/fix_langevin.html @@ -27,7 +27,7 @@
  • zero or more keyword/value pairs may be appended -
    keyword = axes or scale or region
    +
    keyword = axes or scale or region or weight
       axes values = xflag yflag zflag
         xflag,yflag,zflag = 0/1 to exclude/include a dimension in the thermostat
       scale values = type ratio
    @@ -36,6 +36,8 @@
       region values = region-ID
         region-ID = ID of region to apply thermostat to 
     
    + weight values = factor + factor = scale factor to apply to random thermal force

    Examples: @@ -112,6 +114,13 @@ values. specified geometric region (and in the fix group). Since atoms can enter/leave a region, this test is performed each timestep.

    +

    The keyword weight applies the specified scale factor to the Fr term +in the above equation. A value of 1.0 (the default) leaves it +unchanged. A value smaller/greater than 1.0 scales its relative +magnitude as compared to the Ff term. This can be useful for some +models of thermostatting where a different coupling to the background +solvent (coupling constant) is desired. +

    As noted above, fix langevin does not update the coordinates or velocities of its atoms, only the forces. It is normally used with a fix nve that does the time integration. Fix langevin @@ -146,7 +155,10 @@ commands.

    fix nvt, fix temp/rescale, fix viscous

    -

    Default: none +

    Default: +

    +

    The option defaults are axes = 1 1 1, scale = 1.0 for all types, no +region, and weight = 1.0.

    diff --git a/doc/fix_langevin.txt b/doc/fix_langevin.txt index fa652f0058..4992b2a0c8 100644 --- a/doc/fix_langevin.txt +++ b/doc/fix_langevin.txt @@ -18,7 +18,7 @@ Tstart,Tstop = desired temperature at start/end of run (temperature units) :l damp = damping parameter (time units) :l seed = random # seed to use for white noise (positive integer) :l zero or more keyword/value pairs may be appended :l -keyword = {axes} or {scale} or {region} +keyword = {axes} or {scale} or {region} or {weight} {axes} values = xflag yflag zflag xflag,yflag,zflag = 0/1 to exclude/include a dimension in the thermostat {scale} values = type ratio @@ -26,6 +26,8 @@ keyword = {axes} or {scale} or {region} ratio = factor to scale the damping coefficient by {region} values = region-ID region-ID = ID of region to apply thermostat to :pre + {weight} values = factor + factor = scale factor to apply to random thermal force :ule [Examples:] @@ -102,6 +104,13 @@ The keyword {region} applies the fix only to atoms that are in the specified geometric region (and in the fix group). Since atoms can enter/leave a region, this test is performed each timestep. +The keyword {weight} applies the specified scale factor to the Fr term +in the above equation. A value of 1.0 (the default) leaves it +unchanged. A value smaller/greater than 1.0 scales its relative +magnitude as compared to the Ff term. This can be useful for some +models of thermostatting where a different coupling to the background +solvent (coupling constant) is desired. + As noted above, fix {langevin} does not update the coordinates or velocities of its atoms, only the forces. It is normally used with a "fix nve"_fix_nve.html that does the time integration. Fix {langevin} @@ -136,7 +145,10 @@ This fix is not invoked during "energy minimization"_minimize.html. "fix nvt"_fix_nvt.html, "fix temp/rescale"_fix_temp_rescale.html, "fix viscous"_fix_viscous.html -[Default:] none +[Default:] + +The option defaults are axes = 1 1 1, scale = 1.0 for all types, no +region, and weight = 1.0. :link(Dunweg) [(Dunweg)] Dunweg and Paul, Int J of Modern Physics C, 2, 817-27 (1991).