From 32ba98e947d9c5f4388dea11b9d3af61aa9207dd Mon Sep 17 00:00:00 2001 From: sjplimp Date: Tue, 5 Mar 2013 00:15:17 +0000 Subject: [PATCH] git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@9573 f3b2605a-c512-4ea7-a41b-209d697bcdaa --- doc/Section_errors.html | 26 +++++++++----------------- doc/Section_errors.txt | 24 ++++++++---------------- 2 files changed, 17 insertions(+), 33 deletions(-) diff --git a/doc/Section_errors.html b/doc/Section_errors.html index e133169e1c..9d20970018 100644 --- a/doc/Section_errors.html +++ b/doc/Section_errors.html @@ -6743,12 +6743,6 @@ library and re-build LAMMPS.
Self-explanatory. -

Region ID for fix gcmc does not exist -

-
Self-explanatory. - -
-
Region ID for fix heat does not exist
Self-explanatory. @@ -8249,19 +8243,17 @@ to check your simulation geometry.
Inconsistent image flags -

The image flags for a pair on bonded atoms appear to be inconsistent. -Inconstent means that when the coordinates of the two atoms -are unwrapped using the image flags, the two atoms are far apart. +

The image flags for a pair on bonded atoms appear to be inconsistent. +Inconsistent means that when the coordinates of the two atoms are +unwrapped using the image flags, the two atoms are far apart. Specifically they are further apart than half a periodic box length. Or they are more than a box length apart in a non-periodic dimension. -This is usually due to the initial data file not having correct -image flags for the 2 atoms in a bond that straddles a periodic -boundary. They should be different by 1 in that case. -

-
This is a warning because inconsistent image flags will not cause -problems for dynamics or most LAMMPS simulations. However they can -cause problems when such atoms are used with the fix rigid or -replicate commands. +This is usually due to the initial data file not having correct image +flags for the 2 atoms in a bond that straddles a periodic boundary. +They should be different by 1 in that case. This is a warning because +inconsistent image flags will not cause problems for dynamics or most +LAMMPS simulations. However they can cause problems when such atoms +are used with the fix rigid or replicate commands.
KIM Model does not provide `energy'; Potential energy will be zero diff --git a/doc/Section_errors.txt b/doc/Section_errors.txt index a1ff972707..6e51fab09a 100644 --- a/doc/Section_errors.txt +++ b/doc/Section_errors.txt @@ -6739,12 +6739,6 @@ Self-explanatory. :dd Self-explanatory. :dd -{Region ID for fix gcmc does not exist - -Self-explanatory.} :dt - - :dd - {Region ID for fix heat does not exist} :dt Self-explanatory. :dd @@ -8246,18 +8240,16 @@ to check your simulation geometry. :dd {Inconsistent image flags} :dt The image flags for a pair on bonded atoms appear to be inconsistent. -Inconstent means that when the coordinates of the two atoms -are unwrapped using the image flags, the two atoms are far apart. +Inconsistent means that when the coordinates of the two atoms are +unwrapped using the image flags, the two atoms are far apart. Specifically they are further apart than half a periodic box length. Or they are more than a box length apart in a non-periodic dimension. -This is usually due to the initial data file not having correct -image flags for the 2 atoms in a bond that straddles a periodic -boundary. They should be different by 1 in that case. - -This is a warning because inconsistent image flags will not cause -problems for dynamics or most LAMMPS simulations. However they can -cause problems when such atoms are used with the fix rigid or -replicate commands. :dd +This is usually due to the initial data file not having correct image +flags for the 2 atoms in a bond that straddles a periodic boundary. +They should be different by 1 in that case. This is a warning because +inconsistent image flags will not cause problems for dynamics or most +LAMMPS simulations. However they can cause problems when such atoms +are used with the fix rigid or replicate commands. :dd {KIM Model does not provide `energy'; Potential energy will be zero} :dt