git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7892 f3b2605a-c512-4ea7-a41b-209d697bcdaa

This commit is contained in:
sjplimp 2012-03-02 17:05:31 +00:00
parent 4ba21107a1
commit 21133ad922
2 changed files with 106 additions and 102 deletions

View File

@ -183,13 +183,11 @@ the bond topologies you have defined.
<DD>See description of this data type in src/lmptype.h.
<DT><I>Accelerated style in input script but no fix gpu</I>
<DD>UNDOCUMENTED
<DT><I>Accelerator sharing is not currently supported on system</I>
<DD>UNDOCUMENTED
<DD>Multiple MPI processes cannot share the accelerator on your
system. For NVIDIA GPUs, see the nvidia-smi command to change this
setting.
<DT><I>All angle coeffs are not set</I>
@ -794,7 +792,8 @@ will assign the restart file info to actual atoms.
<DT><I>Cannot do GCMC on atoms in atom_modify first group</I>
<DD>UNDOCUMENTED
<DD>This is a restriction due to the way atoms are organized in a list to
enable the atom_modify first command.
<DT><I>Cannot dump JPG file</I>
@ -1438,14 +1437,6 @@ neighbor cutoff. Use the "nsq" style instead of "bin" style.
<DD>Self-explanatory.
<DT><I>Cannot use newton pair with lj/sdk/coul/long/gpu pair style</I>
<DD>Self-explanatory.
<DT><I>Cannot use newton pair with lj/sdk/gpu pair style</I>
<DD>Self-explanatory.
<DT><I>Cannot use newton pair with lj96/cut/gpu pair style</I>
<DD>Self-explanatory.
@ -2198,7 +2189,8 @@ does not exist.
<DT><I>Could not find/initialize a specified accelerator device</I>
<DD>UNDOCUMENTED
<DD>Could not initialize at least one of the devices specified for the gpu
package
<DT><I>Could not grab element entry from EIM potential file</I>
@ -2410,7 +2402,7 @@ simulation box to a great distance.
<DT><I>Double precision is not supported on this accelerator</I>
<DD>UNDOCUMENTED
<DD>Self-explanatory
<DT><I>Dump cfg arguments can not mix xs|ys|zs with xsu|ysu|zsu</I>
@ -2669,15 +2661,18 @@ smaller simulation or on more processors.
<DT><I>Fix GCMC incompatible with given pair_style</I>
<DD>UNDOCUMENTED
<DD>Some pair_styles do not provide single-atom energies, which are needed
by fix GCMC.
<DT><I>Fix GCMC molecule command requires atom attribute molecule</I>
<DD>UNDOCUMENTED
<DD>Should not choose the GCMC molecule feature if no molecules are being
simulated. The general molecule flag is off, but GCMC's molecule flag
is on.
<DT><I>Fix GCMC molecule feature does not yet work</I>
<DD>UNDOCUMENTED
<DD>Fix GCMC cannot (yet) be used to exchange molecules, only atoms.
<DT><I>Fix GPU split must be positive for hybrid pair styles</I>
@ -3053,6 +3048,14 @@ all intensive/extensive when turned into an array by fix ave/time.
<DD>Self-explanatory.
<DT><I>Fix balance string is invalid</I>
<DD>The string can only contain the characters "x", "y", or "z".
<DT><I>Fix balance string is invalid for 2d simulation</I>
<DD>The string cannot contain the letter "z".
<DT><I>Fix bond/break requires special_bonds = 0,1,1</I>
<DD>This is a restriction of the current fix bond/break implementation.
@ -3606,11 +3609,12 @@ non-hydrostatic pressure control can not be used in this case.
<DT><I>GPU library not compiled for this accelerator</I>
<DD>UNDOCUMENTED
<DD>Self-explanatory.
<DT><I>GPU particle split must be set to 1 for this pair style.</I>
<DD>UNDOCUMENTED
<DD>For this pair style, you cannot run part of the force calculation on
the host. See the package command.
<DT><I>Gmask function in equal-style variable formula</I>
@ -3887,6 +3891,10 @@ map command will force an atom map to be created.
<DD>Self-explantory.
<DT><I>Input line quote not followed by whitespace</I>
<DD>An end quote must be followed by whitespace.
<DT><I>Input line too long after variable substitution</I>
<DD>This is a hard (very large) limit defined in the input.cpp file.
@ -3915,7 +3923,8 @@ should not happen if it is a reasonably shaped triangle.
<DT><I>Insufficient memory on accelerator</I>
<DD>UNDOCUMENTED
<DD>There is insufficient memory on one of the devices specified for the gpu
package
<DT><I>Invalid -reorder N value</I>
@ -4000,7 +4009,7 @@ An invalid type is being requested.
<DT><I>Invalid atom type in fix GCMC command</I>
<DD>UNDOCUMENTED
<DD>The atom type specified in the GCMC command does not exist.
<DT><I>Invalid atom type in fix bond/create command</I>
@ -4593,17 +4602,18 @@ compute per-atom quantities with an undefined pair style.
<DT><I>KIM initialization failed</I>
<DD>This is an error return from the KIM library.
<DD>This is an error generated by the KIM library.
<DT><I>KIM neighbor iterator exceeded range</I>
<DD>This error should not normally occur if the KIM library is working
correctly.
<DD>This should not happen. It likely indicates a bug
in the KIM implementation of the interatomic potential
where it is requesting neighbors incorrectly.
<DT><I>KIM_DIR environement variable is unset</I>
<DT><I>KIM_DIR environment variable is unset</I>
<DD>The KIM library requires that this environment variable be set before
running LAMMPS>
<DD>This environment variable must be set to use pair_style kim.
See the doc page for pair_style kim.
<DT><I>KSpace style has not yet been set</I>
@ -5138,10 +5148,6 @@ requested elements.
<DD>Swap frequency in temper command must evenly divide the total # of
timesteps.
<DT><I>Not allocate memory eam/gpu pair style</I>
<DD>UNDOCUMENTED
<DT><I>Nprocs not a multiple of N for -reorder</I>
<DD>Self-explanatory.
@ -5166,11 +5172,6 @@ atoms.
<DD>Self-explanatory.
<DT><I>Out of memory on GPGPU</I>
<DD>GPU memory is limited. Reduce the size of the problem or increase the
number of GPUs.
<DT><I>Out of range atoms - cannot compute PPPM</I>
<DD>One or more atoms are attempting to map their charge to a PPPM grid
@ -5204,7 +5205,7 @@ else the fix contribution to the pressure virial is incorrect.
<DD>The global PPPM grid is larger than OFFSET in one or more dimensions.
OFFSET is currently set to 4096. You likely need to decrease the
requested precision.
requested accuracy.
<DT><I>PPPM order cannot be greater than %d</I>
@ -5230,10 +5231,10 @@ read_restart, or create_box command.
<DD>Self-explanatory.
<DT><I>PWD environement variable is unset</I>
<DT><I>PWD environment variable is unset</I>
<DD>The KIM library requires that this environment variable be set before
running LAMMPS>
<DD>This environment variable must be set to use pair_style kim.
See the doc page for pair_style kim.
<DT><I>Package command after simulation box is defined</I>
@ -5589,7 +5590,7 @@ then a kspace style must also be used.
<DT><I>Pair style kim requires newton pair off</I>
<DD>Self-explanatory.
<DD>This is a current restriction of the KIM library.
<DT><I>Pair style lj/charmm/coul/charmm requires atom attribute q</I>
@ -5649,10 +5650,6 @@ molecule adds forces to atoms owned by other processors.
<DD>An atom_style with this attribute is needed.
<DT><I>Pair style lj/sdk/coul/long/gpu requires atom attribute q</I>
<DD>The atom style defined does not have this attribute.
<DT><I>Pair style peri requires atom style peri</I>
<DD>Self-explanatory.
@ -6296,7 +6293,7 @@ temperature (nvt or langevin).
<DT><I>The package gpu command is required for gpu styles</I>
<DD>UNDOCUMENTED
<DD>Self-explanatory.
<DT><I>Thermo and fix not computed at compatible times</I>
@ -6555,9 +6552,13 @@ length in that dimension. E.g. the xy tilt must be between -half and
<DD>CUDA mode is enabled, so the run style must include a cuda suffix.
<DT><I>USER-CUDA package requires a cuda enabled atom_style</I>
<DD>Self-explanatory.
<DT><I>Unable to initialize accelerator for use</I>
<DD>UNDOCUMENTED
<DD>There was a problem initializing an accelerator for the gpu package
<DT><I>Unbalanced quotes in input line</I>
@ -6593,7 +6594,7 @@ number of processor partitions.
<DT><I>Unknown error in GPU library</I>
<DD>UNDOCUMENTED
<DD>Self-explanatory.
<DT><I>Unknown identifier in data file: %s</I>
@ -7084,7 +7085,8 @@ will be truncated to attempt to prevent the bond from blowing up.
<DT><I>Fix GCMC may delete atom with non-zero molecule ID</I>
<DD>UNDOCUMENTED
<DD>This is probably an error, since you should not delete only one atom
of a molecule. The GCMC molecule exchange feature does not yet work.
<DT><I>Fix SRD walls overlap but fix srd overlap not set</I>

View File

@ -179,13 +179,11 @@ the bond topologies you have defined. :dd
See description of this data type in src/lmptype.h. :dd
{Accelerated style in input script but no fix gpu} :dt
UNDOCUMENTED :dd
{Accelerator sharing is not currently supported on system} :dt
UNDOCUMENTED :dd
Multiple MPI processes cannot share the accelerator on your
system. For NVIDIA GPUs, see the nvidia-smi command to change this
setting. :dd
{All angle coeffs are not set} :dt
@ -790,7 +788,8 @@ will assign the restart file info to actual atoms. :dd
{Cannot do GCMC on atoms in atom_modify first group} :dt
UNDOCUMENTED :dd
This is a restriction due to the way atoms are organized in a list to
enable the atom_modify first command. :dd
{Cannot dump JPG file} :dt
@ -1434,14 +1433,6 @@ Self-explanatory. :dd
Self-explanatory. :dd
{Cannot use newton pair with lj/sdk/coul/long/gpu pair style} :dt
Self-explanatory. :dd
{Cannot use newton pair with lj/sdk/gpu pair style} :dt
Self-explanatory. :dd
{Cannot use newton pair with lj96/cut/gpu pair style} :dt
Self-explanatory. :dd
@ -2194,7 +2185,8 @@ does not exist. :dd
{Could not find/initialize a specified accelerator device} :dt
UNDOCUMENTED :dd
Could not initialize at least one of the devices specified for the gpu
package :dd
{Could not grab element entry from EIM potential file} :dt
@ -2406,7 +2398,7 @@ simulation box to a great distance. :dd
{Double precision is not supported on this accelerator} :dt
UNDOCUMENTED :dd
Self-explanatory :dd
{Dump cfg arguments can not mix xs|ys|zs with xsu|ysu|zsu} :dt
@ -2665,15 +2657,18 @@ Self-explanatory. :dd
{Fix GCMC incompatible with given pair_style} :dt
UNDOCUMENTED :dd
Some pair_styles do not provide single-atom energies, which are needed
by fix GCMC. :dd
{Fix GCMC molecule command requires atom attribute molecule} :dt
UNDOCUMENTED :dd
Should not choose the GCMC molecule feature if no molecules are being
simulated. The general molecule flag is off, but GCMC's molecule flag
is on. :dd
{Fix GCMC molecule feature does not yet work} :dt
UNDOCUMENTED :dd
Fix GCMC cannot (yet) be used to exchange molecules, only atoms. :dd
{Fix GPU split must be positive for hybrid pair styles} :dt
@ -3049,6 +3044,14 @@ The index for the vector is out of bounds. :dd
Self-explanatory. :dd
{Fix balance string is invalid} :dt
The string can only contain the characters "x", "y", or "z". :dd
{Fix balance string is invalid for 2d simulation} :dt
The string cannot contain the letter "z". :dd
{Fix bond/break requires special_bonds = 0,1,1} :dt
This is a restriction of the current fix bond/break implementation. :dd
@ -3602,11 +3605,12 @@ When using a "*" in the restart file name, no matching file was found. :dd
{GPU library not compiled for this accelerator} :dt
UNDOCUMENTED :dd
Self-explanatory. :dd
{GPU particle split must be set to 1 for this pair style.} :dt
UNDOCUMENTED :dd
For this pair style, you cannot run part of the force calculation on
the host. See the package command. :dd
{Gmask function in equal-style variable formula} :dt
@ -3883,6 +3887,10 @@ map command will force an atom map to be created. :dd
Self-explantory. :dd
{Input line quote not followed by whitespace} :dt
An end quote must be followed by whitespace. :dd
{Input line too long after variable substitution} :dt
This is a hard (very large) limit defined in the input.cpp file. :dd
@ -3911,7 +3919,8 @@ should not happen if it is a reasonably shaped triangle. :dd
{Insufficient memory on accelerator} :dt
UNDOCUMENTED :dd
There is insufficient memory on one of the devices specified for the gpu
package :dd
{Invalid -reorder N value} :dt
@ -3996,7 +4005,7 @@ An invalid type is being requested. :dd
{Invalid atom type in fix GCMC command} :dt
UNDOCUMENTED :dd
The atom type specified in the GCMC command does not exist. :dd
{Invalid atom type in fix bond/create command} :dt
@ -4589,17 +4598,18 @@ compute per-atom quantities with an undefined pair style. :dd
{KIM initialization failed} :dt
This is an error return from the KIM library. :dd
This is an error generated by the KIM library. :dd
{KIM neighbor iterator exceeded range} :dt
This error should not normally occur if the KIM library is working
correctly. :dd
This should not happen. It likely indicates a bug
in the KIM implementation of the interatomic potential
where it is requesting neighbors incorrectly. :dd
{KIM_DIR environement variable is unset} :dt
{KIM_DIR environment variable is unset} :dt
The KIM library requires that this environment variable be set before
running LAMMPS> :dd
This environment variable must be set to use pair_style kim.
See the doc page for pair_style kim. :dd
{KSpace style has not yet been set} :dt
@ -5134,10 +5144,6 @@ Self-explantory. :dd
Swap frequency in temper command must evenly divide the total # of
timesteps. :dd
{Not allocate memory eam/gpu pair style} :dt
UNDOCUMENTED :dd
{Nprocs not a multiple of N for -reorder} :dt
Self-explanatory. :dd
@ -5162,11 +5168,6 @@ atoms. :dd
Self-explanatory. :dd
{Out of memory on GPGPU} :dt
GPU memory is limited. Reduce the size of the problem or increase the
number of GPUs. :dd
{Out of range atoms - cannot compute PPPM} :dt
One or more atoms are attempting to map their charge to a PPPM grid
@ -5200,7 +5201,7 @@ else the fix contribution to the pressure virial is incorrect. :dd
The global PPPM grid is larger than OFFSET in one or more dimensions.
OFFSET is currently set to 4096. You likely need to decrease the
requested precision. :dd
requested accuracy. :dd
{PPPM order cannot be greater than %d} :dt
@ -5226,10 +5227,10 @@ Self-explanatory. :dd
Self-explanatory. :dd
{PWD environement variable is unset} :dt
{PWD environment variable is unset} :dt
The KIM library requires that this environment variable be set before
running LAMMPS> :dd
This environment variable must be set to use pair_style kim.
See the doc page for pair_style kim. :dd
{Package command after simulation box is defined} :dt
@ -5585,7 +5586,7 @@ then a kspace style must also be used. :dd
{Pair style kim requires newton pair off} :dt
Self-explanatory. :dd
This is a current restriction of the KIM library. :dd
{Pair style lj/charmm/coul/charmm requires atom attribute q} :dt
@ -5645,10 +5646,6 @@ molecule adds forces to atoms owned by other processors. :dd
An atom_style with this attribute is needed. :dd
{Pair style lj/sdk/coul/long/gpu requires atom attribute q} :dt
The atom style defined does not have this attribute. :dd
{Pair style peri requires atom style peri} :dt
Self-explanatory. :dd
@ -6292,7 +6289,7 @@ temperature (nvt or langevin). :dd
{The package gpu command is required for gpu styles} :dt
UNDOCUMENTED :dd
Self-explanatory. :dd
{Thermo and fix not computed at compatible times} :dt
@ -6551,9 +6548,13 @@ CUDA mode is enabled, so the min style must include a cuda suffix. :dd
CUDA mode is enabled, so the run style must include a cuda suffix. :dd
{USER-CUDA package requires a cuda enabled atom_style} :dt
Self-explanatory. :dd
{Unable to initialize accelerator for use} :dt
UNDOCUMENTED :dd
There was a problem initializing an accelerator for the gpu package :dd
{Unbalanced quotes in input line} :dt
@ -6589,7 +6590,7 @@ The command is not known to LAMMPS. Check the input script. :dd
{Unknown error in GPU library} :dt
UNDOCUMENTED :dd
Self-explanatory. :dd
{Unknown identifier in data file: %s} :dt
@ -7080,7 +7081,8 @@ will be truncated to attempt to prevent the bond from blowing up. :dd
{Fix GCMC may delete atom with non-zero molecule ID} :dt
UNDOCUMENTED :dd
This is probably an error, since you should not delete only one atom
of a molecule. The GCMC molecule exchange feature does not yet work. :dd
{Fix SRD walls overlap but fix srd overlap not set} :dt