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git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@13466 f3b2605a-c512-4ea7-a41b-209d697bcdaa

This commit is contained in:
sjplimp 2015-05-15 16:50:58 +00:00
parent a32bfebe88
commit 1bdd915a90
6 changed files with 10 additions and 8 deletions
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3
doc/fix_adapt_fep.html
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@ -246,9 +246,6 @@ over the course of a 1000-step simulation:
<PRE>variable size equal ramp(1.0,0.1)
fix 1 center adapt 10 atom diameter * v_size
</PRE>
<P>When the <A HREF = "run_style.html">run style</A> is <I>respa</I>, this fix changes
parameters only on the outer loop (largest) timesteps.
</P>
<P>For <A HREF = "run_style.html">rRESPA time integration</A>, this fix changes
parameters on the outermost rRESPA level.
</P>

3
doc/fix_adapt_fep.txt
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@ -232,9 +232,6 @@ over the course of a 1000-step simulation:
variable size equal ramp(1.0,0.1)
fix 1 center adapt 10 atom diameter * v_size :pre
When the "run style"_run_style.html is {respa}, this fix changes
parameters only on the outer loop (largest) timesteps.
For "rRESPA time integration"_run_style.html, this fix changes
parameters on the outermost rRESPA level.

2
doc/fix_gle.html
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@ -13,7 +13,7 @@
</H3>
<P><B>Syntax:</B>
</P>
<PRE>fix ID id-group gle Ns Tstart Tstop seed Amatrix <B>noneq Cmatrix</B> <B>every stride</B>
<PRE>fix ID id-group gle Ns Tstart Tstop seed Amatrix [noneq Cmatrix] [every stride]
</PRE>
<UL><LI>ID, group-ID are documented in <A HREF = "fix.html">fix</A> command

2
doc/fix_gle.txt
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@ -10,7 +10,7 @@ fix gle command :h3
[Syntax:]
fix ID id-group gle Ns Tstart Tstop seed Amatrix [noneq Cmatrix] [every stride] :pre
fix ID id-group gle Ns Tstart Tstop seed Amatrix \[noneq Cmatrix\] \[every stride\] :pre
ID, group-ID are documented in "fix"_fix.html command :ulb,l
gle = style name of this fix command :l

4
doc/fix_langevin.html
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@ -230,6 +230,10 @@ the particles. As described below, this energy can then be printed
out or added to the potential energy of the system to monitor energy
conservation.
</P>
<P>IMPORTANT NOTE: this accumulated energy does NOT include kinetic
energy removed by the <I>zero</I> flag. LAMMPS will print a warning when
both options are active.
</P>
<P>The keyword <I>zero</I> can be used to eliminate drift due to the
thermostat. Because the random forces on different atoms are
independent, they do not sum exactly to zero. As a result, this fix

4
doc/fix_langevin.txt
View File

@ -217,6 +217,10 @@ the particles. As described below, this energy can then be printed
out or added to the potential energy of the system to monitor energy
conservation.
IMPORTANT NOTE: this accumulated energy does NOT include kinetic
energy removed by the {zero} flag. LAMMPS will print a warning when
both options are active.
The keyword {zero} can be used to eliminate drift due to the
thermostat. Because the random forces on different atoms are
independent, they do not sum exactly to zero. As a result, this fix