aa
aat
abc
abf
absTol
Acc
Accelrys
acceptor
Acceptor
acceptors
accomodate
accuracies
ach
achived
achives
ackland
Ackland
acolor
acos
Acta
actinide
adaptation
addforce
addtorque
Adhikari
adiam
Adjiman
adof
adp
Adri
adusting
advect
advection
advects
afer
affine
Afshar
agilio
Agilio
agni
Ai
Aidan
aij
airebo
Aj
ajaramil
akohlmey
Aktulga
al
alain
Alain
alat
Albe
alchemical
AlCu
Alderton
Alejandre
alessandro
Alessandro
aliceblue
allocaters
allosws
AlO
alond
Alonso
amap
Amatrix
Amit
amu
Amzallag
Andzelm
Ang
angmom
angmomx
angmomy
angmomz
Angs
anharmonic
anharmonicity
aniso
anisotropic
ansi
antiquewhite
Antisymmetrized
antisymmetry
Antonelli
aperiodic
api
Appl
Apu
arccos
arcsin
arg
args
artefacts
Arun
asin
Askari
askoose
asphere
ASPHERE
aspherical
Asq
assinged
associdate
Asta
Astart
Astop
asub
asubrama
Asumming
atan
atc
AtC
ATC
athomps
atobody
atomeye
atomfile
atomID
atomistic
atomt
attogram
attograms
attrac
Atw
Atwater
atwt
augt
AuO
autocorrelation
automagically
Avalos
avalue
aveforce
Avendano
avi
AVX
awpmd
AWPMD
Axel
Ay
Ayton
Az
azimuthal
ba
Babadi
backcolor
backend
Baczewski
Bal
balancer
Balasubramanian
Ballenegger
Bammann
Barashev
barostat
barostated
barostating
barostatted
barostatting
Barostatting
barosttating
Barrat
Bartels
barycenter
barye
Bashford
Baskes
Batra
Bayly
bb
bcc
bcolor
bdiam
Beckman
behaviour
Belak
Bellott
benchmarking
Bennet
Berardi
Beraun
berendsen
Berendsen
berger
Berkowitz
berlin
Berne
Beutler
bgq
Bh
biaxial
Biersack
bigint
bilayer
bilayers
binsize
binstyle
biomolecular
biomolecule
Biomolecules
Biophys
Biosym
bisectioning
bispectrum
Bispectrum
bitmapped
bitrate
bitrates
Bitzek
Blaise
blanchedalmond
blocksize
blueviolet
bn
bni
bodyflag
bodystyle
Bogaerts
Bogusz
Bohrs
bondchk
bondings
bondmax
bondtype
Bonet
boolean
Boresch
Botero
Botu
Bouguet
bount
boxcolor
bpclermont
br
Branicio
brennan
Brilliantov
Broadwell
brownian
brownw
Bryantsev
btype
buckPlusAttr
bugfixes
Bulatov
burlywood
Bussi
Buyl
Bybee
bz
cadetblue
caltech
Caltech
Campana
Cao
Capolungo
Caro
cartesian
Cates
cbecker
CCu
cd
cdeam
cdennist
cdof
ceil
Ceil
centre
centro
centroid
Centroid
centrosymmetry
Cerda
ceriotti
Ceriotti
Cerutti
cfg
CFG
cfile
CFL
cgdna
CGDNA
cgs
Chalopin
Champaign
charmm
CHARMM
checkmark
checkqeq
Cheng
Chenoweth
chiral
chirality
Cho
Christoph
Chu
chunkID
Ciccotti
Cieplak
Cii
Cij
cis
civ
clearstore
Clebsch
Clermont
clo
Clovertown
cmap
Cmax
cmdlist
Cmin
cmm
CMM
cn
cN
Cn
cna
cnr
coaxstk
codebase
coeff
Coeff
CoefficientN
coeffs
Coeffs
Colberg
coleman
Colliex
collinear
colvars
Colvars
COLVARS
comID
Commun
complier
compressibility
compressive
Comput
computable
compute
concetric
cond
Condens
config
configfile
configurational
conformational
conjuction
consiting
continously
Contrib
coord
Coord
CoordN
coords
coprocessor
coprocessors
coreshell
cornflowerblue
cornsilk
correlator
cosineshifted
cossq
costheta
Couette
coul
coulombic
Coulombic
Coulombics
Coulommbic
Courant
covalent
covalently
covariance
cpp
cpu
createatoms
createAtoms
Critchley
crossterm
crossterms
Crozier
crystallisation
Crystallogr
Csanyi
csh
cshrc
CSiC
csld
cstyle
csvr
Ctypes
cuda
Cuda
CUDA
CuH
cuthi
cutinner
cutlo
cutmax
cutoffA
cutoffC
cuu
cv
Cv
Cval
cvar
cvff
cwiggle
Cygwin
Cyrot
cyrstals
Daivis
Dammak
dampflag
Darden
darkblue
darkcyan
darkgoldenrod
darkgray
darkgreen
darkkhaki
darkmagenta
darkolivegreen
darkorange
darkorchid
darkred
darksalmon
darkseagreen
darkslateblue
darkslategray
darkturquoise
darkviolet
Das
Dasgupta
datafile
datums
Davidchack
Daw
dcd
de
dE
De
debye
Debye
decompositions
deeppink
deepskyblue
defauls
defgrad
deformable
degress
del
Dellago
delocalization
delocalized
delr
deltaHf
Dendrimer
dendtritic
Denniston
dephase
dephasing
depositied
dequidt
Dequidt
der
Derjagin
Derlet
Deserno
Destree
detils
Devanathan
Devemy
deviatoric
Devine
df
dfftw
DFT
dia
diag
diagonalized
Diallo
diel
differentiable
diffusivity
dihedral
dihedrals
Dihedrals
dihydride
Dij
dimdim
dimensionality
dimgray
dipolar
dir
Direc
dirs
discoverable
discretization
discretized
disp
displacment
dissipative
Dissipative
distro
divdes
dl
dlambda
DLAMMPS
dlopen
dm
dmax
Dmax
Dodds
dodgerblue
dof
Donadio
dotc
Doty
Doye
dpd
DPD
dpdTheta
DPhil
dr
dR
dragforce
Drautz
dreiding
Dreiding
drfourth
drho
drsquared
drude
Drude
DRUDE
dsf
dsmc
dt
du
dU
Dudarev
Duin
Dullweber
Dunbrack
Dunweg
Dupont
dUs
dV
dvector
dVx
dW
dx
dy
dyne
dynes
Dyre
Eaa
Eaat
Eacn
eam
eangle
eatom
Eba
ebond
ebt
Ec
ecoul
ecp
edihed
edim
edip
edu
ee
Eebt
eFF
efield
eflux
Eggebrecht
ehanced
ehex
eHEX
Ei
Eigensolve
Eike
eim
eimp
Eindhoven
Ejtehadi
El
elaplong
Electroneg
electronegative
electronegativity
Eleftheriou
ElementN
elif
Elj
Ellad
ellipsoidflag
elong
elt
emacs
Embt
emi
emol
eN
energetics
energyCorr
eng
Engility
engilitycorp
engrot
engtrans
engvib
enthalpy
envoke
eos
epair
epcc
Epp
Epq
eps
Epton
eq
eqch
Eqp
Eqq
Eqs
equi
equil
equilibrate
equilibrated
equilibrating
equilibration
Equilibria
equilibribum
equilization
eradius
erate
erc
erfc
Erhart
erorate
erose
erotate
Ertas
ervel
esu
esub
et
etag
etap
ethernet
etol
etot
etotal
Europhys
ev
eV
evalue
Evanseck
evdwl
Everaers
evirials
ewald
Ewald
excitations
excv
exe
executables
extrema
ey
ez
factorizable
factorizations
Faken
Farago
Fasolino
Fava
fbMC
Fc
fcc
fcm
Fd
fdotr
fdt
Fehlberg
Fellinger
femtosecond
femtoseconds
fene
Fennell
fep
FEP
fermi
Fermionic
Ferrand
fexternal
Fexternal
ffield
ffmpeg
FFmpeg
ffplay
fft
fftbench
fftw
fhg
Fi
figshare
Fij
filenname
fileper
Fincham
Finchham
Finnis
Fiorin
fixID
fj
Fji
flagfld
flagHI
flaglog
flagN
flagVF
fld
floralwhite
flv
fmackay
fmag
fmass
fmsec
fN
Fn
fname
fno
foces
Fock
Fogarty
Foiles
fopenmp
forcefield
forestgreen
formulae
Fortran
fourier
fp
fphi
fPIC
fplo
Fqq
Fraige
framerate
Fraunhofer
Freitas
Frenkel
Friedrichs
frontend
Frontends
fs
fstyle
ftol
fugacity
Fumi
func
funcs
functionals
funroll
fx
fy
fz
Gahler
gainsboro
Galindo
gammaA
gammaFactor
gammaR
Gan
GaN
ganzenmueller
Ganzenmuller
Gao
Gathert
gauss
gaussian
Gaussians
Gavhane
gayberne
gcc
gcmc
gdot
GeC
georg
Georg
Germann
Germano
gerolf
Gerolf
gettimeofday
gewald
Gezelter
Gflop
gfortran
ghostwhite
Giacomo
gif
gifsicle
Gillan
Gingold
github
Github
gjf
gjwagne
gl
gld
gle
globbing
Glosli
Glotzer
gmail
gmake
gmask
Gmask
Gordan
GPa
gpu
gpuID
gpus
graining
Graining
Grama
grana
granregion
graphene
Greathouse
greenyellow
Greffet
grem
gREM
Grest
Grigera
grmask
Grmask
gromacs
Gromacs
Gronbech
Groot
groupbig
Grueneisen
gsmooth
gstyle
GTL
gui
guidline
Gumbsch
Gunsteren
Gunzenmuller
Guo
gwald
gz
gzipped
Haak
Hafskjold
Halperin
Hamaker
haptic
Hara
Harpertown
Harting
Hartree
Hartrees
Hasan
Hayoun
Hayre
hbcut
hbnewflag
hbond
hcp
heatconduction
Hebenstreit
Hecht
Heenen
Hendrik
Henin
Henkelman
henrich
Henrich
heristics
Herrmann
Hertizian
hertzian
Hertzsch
hexahedrons
hexatic
hexorder
Heyes
HfO
hgrid
Hibbs
Higdon
Hilger
histo
histogrammed
histogramming
hmaktulga
hoc
Hofling
Holian
Holm
holonomic
Homebrew
hooke
Hookean
hotpink
howto
Howto
Hoyt
hstyle
html
hTST
hu
hugoniostat
Hugoniostat
Hugoniot
Hura
hwloc
hydrogens
hydrostatic
hydrostatically
Hynninen
Hyoungki
hyperradius
hyperspherical
hyperthreaded
Hyperthreading
ibar
ibm
icc
icosohedral
idealgas
ideaology
IDR
ielement
ieni
ifdefs
iff
ifort
Ihle
ij
ijk
ijkl
ik
Ikeshoji
ilmenau
Ilmenau
Ilya
im
Im
imageint
Imageint
Imagemagick
imd
Impey
imporopers
impropers
Impropers
imroper
includelink
incompressible
incrementing
indenter
indenters
indianred
inertiax
inertiay
inertiaz
infty
inhomogeneities
inhomogeneous
init
initializations
InP
inregion
integrations
integrators
Integrators
intel
intelmpi
interal
interatomic
Interatomic
interconvert
intergation
interial
intermolecular
interstitials
intra
intramolecular
ints
inv
invariants
inversed
ionocovalent
iparam
ipi
ipp
IPython
Isele
isenthalpic
iso
isodemic
isoenergetic
isoenthalpic
isokinetic
isomorphism
isothermal
isotropically
isovolume
Isralewitz
iteratively
Ith
Itsets
itype
itypeN
Ivector
Iw
ixcm
ixx
Ixx
ixy
Ixy
ixz
Ixz
iy
iycm
iyy
Iyy
iyz
Iyz
iz
izcm
ized
Izrailev
Izumi
Izvekov
izz
Izz
Jacobsen
jagreat
james
Janssens
Jaramillo
Jarzynski
jatempl
jea
jec
Jeffers
jewett
Jewett
ji
Jiang
Jiao
jik
JIK
jku
Joannopoulos
Jochim
Jonsson
Jorgensen
jparam
jpeg
jpeglib
jpg
JPG
jpl
Jth
jtype
jtypeN
Julien
Jupyter
Justo
Jusufi
Jx
Jy
Jz
jzimmer
Kadiri
Kalia
Kamberaj
Kapfer
Karlsruhe
Karplus
Karttunen
kate
Kaufmann
Kayser
kb
kB
kbit
kbits
kcal
Kd
ke
KE
Keblinski
keflag
Keir
Kelchner
Kelkar
Kemper
Keyes
Khersonskii
Khvostov
Ki
kim
kJ
kk
Klahn
Klapp
Kloss
kmax
Kmax
knl
Kohlmeyer
kokkos
Kolafa
Kollman
Kondor
konglt
Koning
Kooser
Koskinen
Kosztin
Kp
Kraker
Kraus
Kremer
Kress
kspace
Kspace
KSpace
Kspring
kT
kth
Kth
Kub
Kubo
Kumagai
Kumar
Kuronen
Kusters
Kutta
kx
Lackmann
Ladd
lagrangian
lambdai
lamda
lammps
Lammps
LAMMPS
lammpsplot
Lamoureux
Landron
langevin
Langevin
Langston
larentzos
Larentzos
Laroche
lars
latencies
lattce
Laupretre
lavenderblush
lawngreen
lB
lbl
LBtype
lcbop
ld
ldfftw
ldg
Lechman
Lehoucq
Leimkuhler
leiu
lemonchiffon
Lenart
lennard
Lennard
Lenosky
Lett
Leuven
Lewy
lgvdw
Liang
libAtoms
libdir
libgpu
libjpeg
liblammps
Liblammps
liblink
libmeam
libmpi
libmpich
libpng
libpoems
librar
libreax
libs
ligand
lightblue
lightcoral
lightcyan
lightgoldenrodyellow
lightgreen
lightgrey
lightpink
lightsalmon
lightseagreen
lightskyblue
lightslategray
lightsteelblue
lightyellow
Likhtman
limegreen
Lindahl
lineflag
lineforce
linesearch
linux
Liouville
Lisal
listfile
Littmark
Liu
Livermore
lj
lm
lmp
lmpptr
lmpqst
lmpsdata
Lmpsdata
lmptype
ln
localTemp
localvectors
logfile
logfreq
logicals
Lomdahl
lookups
Lookups
LoopVar
Lorant
lossy
lps
lrt
lsfftw
ltbbmalloc
lubricateU
lucy
Lussetti
Lustig
lx
ly
Lybrand
Lyulin
lz
Mackay
Mackrodt
macroparticle
Madura
Magda
Maginn
mainboards
makefile
Makefile
makefiles
Makefiles
makelist
Makse
malloc
Malolepsza
Manby
Mandadapu
Manh
manifoldforce
Manolopoulos
manybody
MANYBODY
Maras
Marrink
Marsaglia
Marseille
Martyna
Mashayak
massless
masstotal
Matchett
matlab
matplotlib
Mattox
Mattson
maxangle
maxbond
maxeval
Maxfoo
maxit
maxiter
maxsize
maxspecial
maxSteps
maxX
mbt
Mbytes
MBytes
McLachlan
md
mdf
meam
meamf
mech
mechanice
mechanim
Mecke
mediumaquamarine
mediumblue
mediumorchid
mediumpurple
mediumseagreen
mediumslateblue
mediumspringgreen
mediumturquoise
mediumvioletred
Mees
Mehl
Mei
Meloni
Melrose
Mem
memalign
MEMALIGN
membered
Mendelev
mer
Meremianin
Merz
mescscopic
meshless
meso
mesocopic
mesoparticle
mesoscale
mesoscopic
metadynamics
Metadynamics
methine
Metin
Mezei
mgpt
MGPT
mgptfast
mh
micelle
michael
michele
Mickel
microcanonical
microelastic
microporous
Microscale
microsec
midnightblue
mie
Mie
Mikami
Militzer
Minary
mincap
minima
minimizations
minimizer
minimizers
minorder
minSteps
mintcream
Mintmire
mis
Mises
Mishin
Mishra
mistyped
mistyrose
Mj
mK
mkdir
mkv
mlparks
mlutiple
modc
Modell
modelled
modelling
Modelling
Modine
mol
Mol
molfile
Molfile
moltemplate
momoner
Monaghan
Monaghans
monodisperse
monodispersity
monovalent
Montalenti
Montero
Morefoo
morris
Morriss
morse
Moseler
Moskalev
mov
mpi
Mpi
MPI
mpicc
mpich
mpicxx
mpiexec
mpiio
mpirun
mplayer
mscg
MSCG
msd
msi
MSI
msm
msse
msst
Mtchell
Mth
mtk
Mtotal
Muccioli
Mukherjee
Mulders
multibody
Multibody
multicenter
multicmd
multicore
multielectron
multinode
multiphysics
multiscale
multisectioning
multithreading
Multithreading
Mundy
Murdick
Murtola
Murty
Muser
mutli
mutliple
muVT
mux
muy
muz
mv
mV
Mvapich
MxN
myCompute
myIndex
mylammps
mysocket
myTemp
myVec
nabla
Nakano
namespace
namespaces
NaN
Nangletype
nangletypes
Nangletypes
nano
nanoindentation
Nanoletters
nanometer
nanometers
nanoparticles
nanosec
Narulkar
nasa
nasr
Natoli
natoms
Natoms
Nattempt
navajowhite
Navier
nb
Nbin
Nbins
nbody
Nbody
nbondtype
Nbondtype
nbondtypes
Nbondtypes
nBOt
nbrhood
Nbtypes
nc
Nc
nchunk
Nchunk
ncoeff
ncorr
ncount
nd
Ndihedraltype
Ndirango
ndof
Ndof
Ndouble
ndx
neb
Neelov
neighbouring
nelem
Nelement
Nelements
nemd
netcdf
Neumann
nevery
Nevery
Newns
newtype
Neyts
Nf
nfile
Nfile
Nfreq
ng
Ng
nghost
Nghost
Ngpu
nh
nharmonic
nhc
NiAlH
Nicklas
Nimpropertype
Ninteger
Nissila
nist
nitrides
niu
Nk
nl
nlen
Nlines
nlocal
Nlocal
Nlog
nm
Nm
Nmax
Nmin
Nmols
nn
Nocedal
nocite
nocoeff
nodeless
noforce
Noid
Nonbond
nonbonded
nonequilibrium
nongauss
nonGaussian
nonlocal
Nonlocal
Noordhoek
nopreliminary
Nord
norder
Nordlund
normals
Noskov
noslip
noticable
noutcol
Noutput
noutrow
Novik
Novint
np
Npair
Npairs
nparticle
npernode
nph
NpH
Nphi
nphug
nprocs
Nprocs
npt
nr
Nr
Nrecompute
Nrepeat
nreset
Nrho
nrun
Ns
Nsample
nsec
Nskip
nsq
Nstart
nstats
Nstep
Nsteplast
Nstop
Nswap
Nt
Ntable
ntheta
nthreads
Ntptask
Ntype
ntypes
Ntypes
nucleotides
nulcear
num
numa
numactl
numerics
numpy
Numpy
Nvalue
Nvaluelast
Nvalues
nvc
nvcc
nve
nvidia
Nvidia
nvk
nvt
Nwait
nx
Nx
nxnodes
ny
Ny
nz
Nz
octahedral
octants
ohenrich
ok
OKeefe
OKeefe
O'Keefe
oldlace
Oleinik
Olfason
olivedrab
Ollila
omegaDD
omegax
omegay
omegaz
omp
OMP
onelevel
oneway
onn
ons
OO
openKIM
OpenMP
opls
Oppelstrup
optionns
orangered
orderomg
organised
organometallic
orientational
orientorder
Orlikowski
ornl
Ornstein
Orsi
orthonormal
orthorhombic
ot
Ouldridge
outmost
outpur
outputss
outut
overlayed
overviewed
Ovito
oxdna
oxDNA
oxygens
padua
Padua
palegoldenrod
palegreen
paleturquoise
palevioletred
Panagiotopoulos
Pandit
Papaconstantopoulos
papayawhip
paquay
Paquay
parallelepiped
parallelipiped
Parallelizable
parallelization
parallelized
parallelizing
param
parameterization
parameterizations
parameterize
parameterized
parametrization
parametrized
params
Parinello
parmin
Parrinello
Partay
partices
Particuology
pastewka
Pastewka
Pattnaik
Pavese
pbc
pc
pchain
Pchain
Pdamp
pdb
pdf
pdim
pe
Peachey
peachpuff
Pearlman
Pedersen
Peng
peratom
perfoms
Pergamon
peri
Peridymaics
peridynamic
Peridynamic
peridynamics
Peridynamics
permittivity
Perram
persp
Persp
peru
Peskin
Pettifor
pfactor
ph
Phillpot
phonon
phophorous
phosphide
Physica
physik
picocoulomb
picocoulombs
picogram
picograms
picosecond
picoseconds
picosend
pid
Pieter
pimd
Pisarev
Pishevar
Pitera
pj
pjintve
planeforce
Plathe
Plimpton
plog
ploop
PloS
plt
pmb
pN
png
Poiseuille
Polak
polarizabilities
polarizability
polarizable
Polarizable
polarizables
Politano
polyA
polybond
polydisperse
polydispersity
popen
popstore
pos
Poschel
posix
Postma
postprocessing
potin
Pourtois
powderblue
ppn
pppm
prd
pre
Pre
prec
preexponential
prefactor
prefactors
prepend
preprint
preprocessor
printf
printflag
Priya
proc
Proc
procs
Prony
ps
Ps
pscreen
pscrozi
psec
pseudodynamics
pseudopotential
Pstart
Pstop
pstyle
Ptarget
pthread
pthreads
ptr
pu
purdue
pushded
pushstore
pvar
pw
px
Px
pxx
Pxx
Pxy
py
Py
pydir
pylammps
PyLammps
pymol
pypar
Pyy
pz
Pz
Pzz
qbmsst
qcore
qdist
qE
qeq
QeQ
QEq
qfile
qi
Qi
qj
Qj
Ql
qm
Qmin
qmmm
qmol
qoffload
qopenmp
qoverride
qtb
Quant
quantic
quartic
quaternion
quaternions
quati
quatj
quatk
quatw
Queteschiner
radian
radians
Rafferty
rahman
Rahman
Raman
ramped
Ramprasad
randomizations
Raphson
Rappe
Ravelo
rc
Rc
Rcm
Rcmx
Rcmy
Rcut
rcutfac
rdc
rdf
README
realtime
reamin
reax
ReaxFF
rebalance
rebalancing
rebo
recentered
recentering
recursing
Ree
regoin
Reinders
relect
relesed
relTol
remappings
remediate
Ren
Rendon
reneighboring
Reneighboring
reneighborings
Rensselaer
reparametrizing
representable
repuls
rescale
rescaled
rescales
rescaling
Rescaling
respa
RESPA
respecified
responder
resquared
REsquared
restartfile
rethrowing
rewrap
rezwanur
rfac
rfile
rg
Rg
Rhaphson
rheological
rhodo
Rhodo
rhodopsin
rhosum
Ri
Ribiere
richard
rigidID
rigidify
rij
Rij
RIj
Rin
Rino
RiRj
Risi
Rix
Riy
rj
Rj
Rjk
rjones
rk
rkf
rmask
Rmask
rmax
Rmax
rmdir
rmin
Rmin
RMS
rNEMD
ro
Rockett
Ronchetti
Rosati
Rossky
rosybrown
rotationally
rotationsl
royalblue
rozero
Rperp
rRESPA
Rspace
Rubia
Rudd
Rudra
Rudranarayan
Runge
runtime
Rutuparna
rx
Ryckaert
Rycroft
Rydbergs
Rz
saddlebrown
Sadigh
saed
safezone
Safran
Sagui
Salles
sandia
Sandia
sandybrown
sc
scalability
scalable
Scalable
scalexy
scalexz
scaleyz
Schaik
Schlitter
Schmid
Schoen
Schulten
Schunk
Schwen
scriping
Scripta
sdk
seagreen
Secor
sed
segmental
sellerio
Sellerio
semiaxes
semimetals
Semin
Sensable
setfl
setforce
setmask
Setmask
setpoint
setvel
severeal
sfftw
Sg
Shan
shapex
shapey
shapez
shapshot
shardlow
Shardlow
shawn
Shen
Shenderova
Shiga
Shinoda
shockvel
shoule
si
SiC
Siepmann
Sij
Sikandar
Silbert
Silling
Simul
simulataneous
simulations
Sinnott
sinusoid
sinusoidally
SiO
Sirk
Sival
sizeI
sizeJ
sizex
sjplimp
sjtu
skyblue
slateblue
slategray
slater
Slepoy
sligthly
Sliozberg
sllod
smallint
Smallint
smd
SMD
smi
Smirichinski
Smit
smtbq
sna
snad
snapcoeff
snaphots
snapparam
snav
Sodani
Soderlind
softed
solvated
Sorensen
soundspeed
Souza
sp
spacings
Spearot
Spellmeyer
sph
SPH
spheriods
spparks
Springer
springgreen
sqrt
src
srd
Srolovitz
srp
srun
ss
ssao
stamoore
stanford
Starikov
startstep
Startstep
statcoul
statcoulombs
statvolt
stdin
steelblue
Stegailov
Steinhardt
Steinhauser
Stepaniants
stepwise
Stesmans
Stillinger
stk
Stockmayer
Stoddard
stoichiometric
stoichiometry
Stokesian
Stoll
stopstep
Stouch
Straatsma
Stratford
Straub
strcmp
streitz
Streitz
Streiz
strided
strietz
Stukowski
stylecomputes
Su
subbox
subcutoff
subdirectory
subdomains
subinterval
subintervals
Subramaniyan
subscripted
subscripting
substeps
substyle
substyles
sudo
Sukumaran
sumsq
Sunderland
superset
supersphere
Supinski
surc
surfactants
sw
Swegat
swiggle
Swiler
Swol
Swope
Sx
sy
Sy
symplectic
Synechococcus
sys
sysdim
sysmte
Syst
Sz
Tabbernor
tabinner
Tadmor
tagint
Tait
taitwater
Tajkhorshid
tanh
taskset
taubi
tchain
Tchain
Tcom
tcsh
tdamp
Tdrude
Technolgy
Telsa
tempCorrCoeff
templated
Templeton
ters
tersoff
Tersoff
tesselation
tesselations
Tetot
tex
tfmc
tfMC
th
Thakkar
Thakker
thb
thei
Theor
thermalization
thermalize
thermalized
thermalizing
thermo
thermochemical
thermochemistry
thermodynamic
thermodynamically
Thermophysical
thermostate
thermostated
thermostates
thermostating
Thermostating
thermostatted
thermostatting
Thermostatting
Thes
Thess
Thexe
Thijsse
Thirumalai
threebody
thrid
thylakoid
THz
Tij
Tildesley
timespan
timestamp
timestamps
timestep
timestepping
timesteps
TiN
TiO
Tirrell
Titer
Tji
Tk
Tkin
tloop
tlsph
tmax
Tmax
tmd
Tmin
tmp
tN
Tobias
tol
topologies
Torder
torsions
Tosi
Toukmaji
Toxvaerd
tpa
tpc
tptask
tqx
tqy
tqz
tradeoff
traj
transferability
translational
trate
Tref
Tretyakov
tri
triangleflag
triclinic
triflag
trigonal
trilinear
tripflag
tris
trj
trott
Trott
Trung
tscale
Tschopp
Tsige
Tsrd
Tstart
tstat
Tstop
Tsuzuki
Tt
TThis
ttm
tu
Tuckerman
tue
Turkand
Tutein
twobody
twojmax
Tx
txt
typeI
typeJ
typeN
Tz
Tzou
ub
Uberuaga
uChem
uCond
Uhlenbeck
Ui
uk
ul
uloop
ulsph
uMech
umin
Umin
un
unary
unbonded
uncomment
uncompute
underprediction
undump
uniaxial
uniaxially
unimodal
unitless
Universite
unix
unoptimized
unpadded
unphysical
unphysically
unscaled
unsets
unshifted
unsmoothed
unsolvated
unsplit
unstrained
untar
untilted
upenn
upto
Urbana
usec
userguide
usr
util
utils
utsa
Uttormark
uvm
uwo
vacf
valent
Valeriu
valgrind
Valone
valuev
Valuev
valus
valuse
Varshalovich
Varshney
vashishta
Vashishta
vcm
Vcm
vdim
vdisplace
vec
vectorial
vectorization
vectorized
Vectorized
vel
velocites
Verlag
verlet
Verlet
ves
vhi
vibrational
Vij
Vikas
virial
Virial
virialmode
virials
virtualenv
virutal
viscoelastic
viscoelasticity
viscosities
viscously
vizplotgui
Vj
vlo
vmax
vmd
VMDARCH
VMDHOME
vn
Voigt
volfactor
volpress
volumetric
von
Voro
Vorobyov
voronoi
Voronoi
VORONOI
Vorselaars
Voth
vpz
vratio
Vries
Vstream
vtarget
vtk
VTK
vtp
vtr
vtu
vv
vx
Vx
vxcm
vy
Vy
vycm
vz
Vz
vzcm
vzi
Waals
Wadley
wallstyle
walltime
warmup
wavefunction
wavepacket
wavepackets
wavevector
wB
Wbody
Weckner
Wennberg
Westview
Whelan
whenthe
whitesmoke
whitespace
Wi
Wicaksono
wih
Wirnsberger
wirtes
witin
wn
Wolde
Worley
Wriggers
Wurtzite
www
wx
Wx
wy
Wy
wz
Wz
xa
xAVX
xb
Xc
xcm
Xcm
xCORE
Xeon
xflag
xhi
xHost
Xiaowang
xk
xlat
xlo
xmax
Xmax
xmgrace
xMIC
xmovie
Xmovie
xmu
Xmu
XP
XPlor
xrd
xs
xstk
xsu
xtc
xu
Xu
xy
xyz
xz
xzhou
Yamada
Ybar
ybox
Yc
ycm
Yeh
yellowgreen
yflag
yhi
yi
ylat
ylo
Yoshida
ys
ysu
yu
Yu
yukawa
Yukawa
yx
yy
yz
Zannoni
zbl
ZBL
Zc
zcm
Zepeda
zflag
Zhang
zhi
Zhou
Zhu
zi
Zi
ziegenhain
Ziegenhain
Zj
zlim
zlo
zN
zs
zsu
zu
zx
zy
Zybin
zz
