105 lines
2.8 KiB
Bash
105 lines
2.8 KiB
Bash
#!/bin/sh
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# Slackware build script for clustalx
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# Written by Petar Petrov, <ppetrov@paju.oulu.fi> and
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# hereby submitted to the public domain
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# Based on the clustalx PKGBUILD from Archlinux AUR
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# (http://aur.archlinux.org/packages.php?ID=25080).
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# PKGBUILD submitter is mickelliot and maintainer is
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# machoo02. Thank you!
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# THIS SLACKBUILD IS DISTRIBUTETD IN THE HOPE OF BEING
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# USEFUL BUT WITHOUT ANY WARRANTY. THE AUTHOR IS _NOT_
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# RESPONSIBLE FOR ANY DAMAGE OR DATA LOSS CAUSED BY IT.
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PRGNAM=clustalx
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VERSION=${VERSION:-2.1}
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BUILD=${BUILD:-1}
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TAG=${TAG:-_SBo}
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if [ -z "$ARCH" ]; then
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case "$( uname -m )" in
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i?86) export ARCH=i486 ;;
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arm*) export ARCH=arm ;;
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*) export ARCH=$( uname -m ) ;;
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esac
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fi
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CWD=$(pwd)
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TMP=${TMP:-/tmp/SBo}
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PKG=$TMP/package-$PRGNAM
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OUTPUT=${OUTPUT:-/tmp}
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if [ "$ARCH" = "i486" ]; then
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SLKCFLAGS="-O2 -march=i486 -mtune=i686"
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LIBDIRSUFFIX=""
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elif [ "$ARCH" = "i686" ]; then
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SLKCFLAGS="-O2 -march=i686 -mtune=i686"
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LIBDIRSUFFIX=""
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elif [ "$ARCH" = "x86_64" ]; then
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SLKCFLAGS="-O2 -fPIC"
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LIBDIRSUFFIX="64"
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else
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SLKCFLAGS="-O2"
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LIBDIRSUFFIX=""
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fi
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set -e
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rm -rf $PKG
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mkdir -p $TMP $PKG $OUTPUT
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cd $TMP
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rm -rf $PRGNAM-$VERSION
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tar xvf $CWD/$PRGNAM-$VERSION.tar.gz
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cd $PRGNAM-$VERSION
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# The patch is from Archlinux AUR, as mentioned above.
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patch -p1 < $CWD/fix-static.patch
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chown -R root:root .
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find -L . \
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\( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 -o -perm 511 \) \
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-exec chmod 755 {} \; -o \
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\( -perm 666 -o -perm 664 -o -perm 600 -o -perm 444 -o -perm 440 -o -perm 400 \) \
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-exec chmod 644 {} \;
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sed -i 's/static//g' clustalx.pro
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qmake
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#Use our CFLAGS/CXXFLAGS
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sed -i "/^C.*.*FLAGS/s/=/+=/" Makefile
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CFLAGS="$SLKCFLAGS" \
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CXXFLAGS="$SLKCFLAGS" \
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make
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install -D -m755 clustalx $PKG/usr/bin/clustalx
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install -D -m644 colprot.xml $PKG/usr/share/$PRGNAM/colprot.xml
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install -D -m644 coldna.xml $PKG/usr/share/$PRGNAM/coldna.xml
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install -D -m644 coldna.xml $PKG/usr/share/$PRGNAM/colprint.xml
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install -D -m644 clustalx.hlp $PKG/usr/share/$PRGNAM/clustalx.hlp
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find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \
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| cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true
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# Menu item and icon
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mkdir -p $PKG/usr/share/{applications,pixmaps}
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cp $CWD/clustalx.desktop $PKG/usr/share/applications
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cp $CWD/clustalx.png $PKG/usr/share/pixmaps
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mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION
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cp -a \
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README COPYING \
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$PKG/usr/doc/$PRGNAM-$VERSION
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cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild
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cat $CWD/References > $PKG/usr/doc/$PRGNAM-$VERSION/References
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mkdir -p $PKG/install
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cat $CWD/slack-desc > $PKG/install/slack-desc
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cat $CWD/doinst.sh > $PKG/install/doinst.sh
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cd $PKG
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/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
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