slackbuilds

History

Andrew Clemons 68e8bf980d academic/archaeopteryx: Use zulu-openjdk11. Before the adoptopenjdk packages was switched to JDK12, it was JDK11. Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>		2022-03-03 15:56:50 +07:00
..
README	academic/archaeopteryx: Updated for version 0.9928b.	2018-12-24 08:56:55 +07:00
References	academic/archaeopteryx: Added (phylogenetic trees).	2017-04-22 08:10:38 +07:00
_aptx_configuration_file.txt	academic/archaeopteryx: Added (phylogenetic trees).	2017-04-22 08:10:38 +07:00
archaeopteryx.SlackBuild	All: Support $PRINT_PACKAGE_NAME env var	2021-07-17 21:55:09 +02:00
archaeopteryx.desktop	academic/archaeopteryx: Added (phylogenetic trees).	2017-04-22 08:10:38 +07:00
archaeopteryx.info	academic/archaeopteryx: Use zulu-openjdk11.	2022-03-03 15:56:50 +07:00
archaeopteryx.png	academic/archaeopteryx: update copyright year + switch to adoptopenjdk	2021-05-18 23:40:05 +07:00
doinst.sh	academic/archaeopteryx: Added (phylogenetic trees).	2017-04-22 08:10:38 +07:00
slack-desc	academic/archaeopteryx: Updated for version 0.9928b.	2018-12-24 08:56:55 +07:00

README

Archaeopteryx: visualise, analyse and edit phylogenetic trees

Archaeopteryx is a software tool for the visualization, analysis, and
editing of potentially large and highly annotated phylogenetic trees.
Archaeopteryx (the successor to ATV) is entirely written in the Java
programming language and is based on the forester libraries.

Check /usr/share/archaeopteryx for an example configuration file (called
'_aptx_configuration_file.txt' or get one from the program's web-site).

For more configuration files and examples, visit the program's web-page
and this Dropbox link:
https://www.dropbox.com/sh/s52wz8ygg7kwiwa/AAAakvNKfjHL62dKKS0oq1LDa

Please cite:
Han M.V. and Zmasek C.M. (2009)
phyloXML: XML for evolutionary biology and comparative genomics
BMC Bioinformatics, 10:356.