slackbuilds/academic/trfind
Petar Petrov 29b8cd0625 academic/trfind: Fix executable for use with RepeatMasker.
Sorry Petar :(

Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
2018-01-17 19:46:30 +07:00
..
LICENSE academic/trfind: Added (Tandem repeats finder: analyze DNA seqs). 2018-01-13 07:13:05 +07:00
README academic/trfind: Added (Tandem repeats finder: analyze DNA seqs). 2018-01-13 07:13:05 +07:00
References academic/trfind: Added (Tandem repeats finder: analyze DNA seqs). 2018-01-13 07:13:05 +07:00
slack-desc academic/trfind: Added (Tandem repeats finder: analyze DNA seqs). 2018-01-13 07:13:05 +07:00
trfind.SlackBuild academic/trfind: Fix executable for use with RepeatMasker. 2018-01-17 19:46:30 +07:00
trfind.info academic/trfind: Added (Tandem repeats finder: analyze DNA seqs). 2018-01-13 07:13:05 +07:00

README

Tandem repeats finder: a program to analyze DNA sequences

A tandem repeat in DNA is two or more adjacent, approximate copies of a
pattern of nucleotides. Tandem Repeats Finder is a program to locate and
display tandem repeats in DNA sequences. In order to use the program,
the user submits a sequence in FASTA format.

Example usage:
trf hg38.fasta 2 5 7 80 10 50 2000 -l 6

LICENSE:
Please read the License Terms before downloading:
https://tandem.bu.edu/trf/trf.license.html

Please cite:
G. Benson "Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acids Research (1999) Vol. 27, No. 2, pp. 573-580.