slackbuilds/academic/meme-db-motif
Heinz Wiesinger 63daf9f79a All: Support $PRINT_PACKAGE_NAME env var
Signed-off-by: Heinz Wiesinger <pprkut@slackbuilds.org>
2021-07-17 21:55:09 +02:00
..
README academic/meme-db-motif: Added (MEME Suite motif databases) 2020-01-12 08:48:00 +07:00
meme-db-motif.SlackBuild All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
meme-db-motif.info academic/meme-db-motif: update for version 12.21 2021-05-18 23:40:12 +07:00
slack-desc academic/meme-db-motif: Added (MEME Suite motif databases) 2020-01-12 08:48:00 +07:00

README

Motif Databases (updated 28 Oct 2019) to be used with MEME Suite:

Eukaryote DNA (13 Databases)
Prokaryote DNA (4 Databases)
Methylcytosine DNA (1 Databases)
JASPAR (NON-REDUNDANT) DNA (21 Databases)
JASPAR (REDUNDANT) DNA (21 Databases)
JASPAR COLLECTIONS DNA (5 Databases)
TFBSshape DNA (3 Databases)
CIS-BP Single Species DNA (321 Databases)
ARABIDOPSIS (Arabidopsis thaliana) DNA (2 Databases)
ECOLI (Escherichia coli) DNA (2 Databases)
FLY (Drosophila melanogaster) DNA (6 Databases)
HUMAN (Homo sapiens) DNA (4 Databases)
MALARIA (Plasmodia falciparum) DNA (1 Databases)
MOUSE (Mus musculus) DNA (5 Databases)
WORM (Caenorhabditis elegans) DNA (1 Databases)
YEAST (Saccharomyces_cerevisiae) DNA (6 Databases)
CISBP-RNA Single Species RNA (268 Databases)
CISBP-RNA Single Species RNA (DNA-encoded) (268 Databases)
RNA (25 Databases)
RNA (DNA-encoded) (25 Databases)
miRBase Single Species microRNA (223 Databases)
miRBase Single Species microRNA (DNA-encoded) (223 Databases)
Protein Motifs (2 Databases)

Note!
The unarchived size of this is ~140 MB