| .. |
|
CAFS_divergence
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
CAPS_coevolution
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
Data2FCS
|
academic/Data2FCS: Use zulu-openjdk11.
|
2022-03-03 15:56:48 +07:00 |
|
DendroPy
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
EMBASSY
|
academic/EMBASSY: Remove .la files.
|
2022-03-08 09:44:25 +07:00 |
|
EMBOSS
|
academic/EMBOSS: Remove .la files.
|
2022-03-08 09:44:25 +07:00 |
|
FCSalyzer
|
academic/FCSalyzer: Handle url-encoded filenames.
|
2022-03-05 00:17:45 +13:00 |
|
FreeFem
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
Gblocks
|
academic/Gblocks: Fix download.
|
2022-02-27 22:29:06 -06:00 |
|
GeoGebra
|
academic/GeoGebra: Use zulu-openjdk7.
|
2022-03-03 15:56:45 +07:00 |
|
Gridcoin-Research
|
academic/Gridcoin-Research: Use MAKEFLAGS to pass numjobs.
|
2022-02-27 22:29:04 -06:00 |
|
HMMER
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
IGV
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
ITK
|
academic/ITK: Update the internal patch for gcc 11.x.
|
2021-08-19 18:33:48 +07:00 |
|
Kst
|
academic/Kst: patch to fix the path for H5Cpp.h file
|
2022-03-03 15:56:37 +07:00 |
|
MetaPhlAn2
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
OpenFOAM
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
PhyML
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
PyAMG
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
R
|
academic/R: Updated for version 4.1.2.
|
2022-02-09 16:18:00 +07:00 |
|
RAxML
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
RepeatMasker
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
STAR
|
academic/STAR: Updated to version 2.7.10a
|
2022-02-02 23:24:38 +07:00 |
|
SU2
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
SeqMonk
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
Shark
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
TreeGraph
|
academic/TreeGraph: Use zulu-openjdk11.
|
2022-03-03 15:56:48 +07:00 |
|
ViennaRNA
|
academic/ViennaRNA: Remove .la files.
|
2022-03-08 09:44:25 +07:00 |
|
WEVOTE
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
WordNet
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
ZeGrapher
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
abntex
|
academic/abntex: Updated for version 20200715_f0a4d3c.
|
2022-02-27 22:29:04 -06:00 |
|
aenig4
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
aline
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
aliview
|
academic/aliview: Use zulu-openjdk11.
|
2022-03-03 15:56:48 +07:00 |
|
amd
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
amplicon
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
amplifx
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
antiprism
|
academic/antiprism: Remove .la files.
|
2022-03-08 09:44:26 +07:00 |
|
archaeopteryx
|
academic/archaeopteryx: Use zulu-openjdk11.
|
2022-03-03 15:56:50 +07:00 |
|
aris
|
academic/aris: Fix for gcc >= 10.x.
|
2022-02-27 22:29:04 -06:00 |
|
arka
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
armadillo
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
arpack
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
arpack-ng
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
artha
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
avl
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
bcftools
|
academic/bcftools: Update to version 1.15
|
2022-03-05 08:18:20 +07:00 |
|
bedGraphToBigWig
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
bedtools
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
biblesync
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
bibletime
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
bibus
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
biopython
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
boinc
|
academic/boinc: Fix wxPython/wxGTK3 conflict.
|
2022-03-09 17:20:43 +07:00 |
|
bowtie
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
bowtie2
|
academic/bowtie2: Updated to version 2.4.5
|
2022-01-31 10:13:40 +07:00 |
|
bowtie2-legacy
|
academic/bowtie2-legacy: Patch source.
|
2022-03-03 09:38:11 +00:00 |
|
btf
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
bwa
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
cadabra2
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
calc
|
academic/calc: Updated for version 2.14.0.14.
|
2022-02-06 11:42:42 +07:00 |
|
calcoo
|
various: Use zulu jdk builds for REQUIRES.
|
2022-03-03 15:56:51 +07:00 |
|
camd
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
cap3
|
academic/cap3: Note the need to download the tarballs manually.
|
2022-02-27 22:29:05 -06:00 |
|
cblas
|
academic/cblas: Updated for version 3.10.0
|
2021-09-06 08:50:29 +07:00 |
|
ccolamd
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
cdo
|
academic/cdo: Updated for version 2.0.4.
|
2022-02-17 12:59:54 +07:00 |
|
celestia
|
academic/celestia: Wrap README at 72 columns.
|
2022-03-12 14:34:16 -05:00 |
|
chartgeany
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
chemtool
|
academic/chemtool: Fix build failure with gcc10.
|
2022-02-21 02:41:03 -06:00 |
|
cholmod
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
cistrome-CEAS
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
cistrome-MACS
|
academic/cistrome-MACS: Handle content-disposition download.
|
2022-03-05 00:18:21 +13:00 |
|
cistrome-conductGO
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
cistrome-extra
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
cistrome-mdseqpos
|
academic/cistrome-mdseqpos: Fix dependency.
|
2022-02-14 08:06:58 +07:00 |
|
clark-ugene
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
cld2
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
clustalo
|
academic/clustalo: Remove .la files.
|
2022-03-08 09:44:26 +07:00 |
|
clustalw
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
clustalx
|
academic/clustalx: Patch for qt5.
|
2022-02-27 22:29:05 -06:00 |
|
colamd
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
colin
|
academic/colin: Use qt4.
|
2022-02-27 22:29:05 -06:00 |
|
convertall
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
copasi
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
cryptominisat
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
csparse
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
cufflinks
|
academic/cufflinks: Fix info file.
|
2022-03-12 11:26:42 +13:00 |
|
cutadapt
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
cvc4
|
various: Use zulu jdk builds for REQUIRES.
|
2022-03-03 15:56:51 +07:00 |
|
cxsparse
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
dakota
|
academic/dakota: Updated for version 6.15.0.
|
2022-02-27 22:29:05 -06:00 |
|
datamash
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
diamond
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
ds9
|
academic/ds9: Wrap README at 72 columns.
|
2022-03-12 14:34:33 -05:00 |
|
easy_spice
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
ed-v6
|
academic/ed-v6: Fix github tarball handling.
|
2022-03-01 19:35:43 +07:00 |
|
edsim51di
|
academic/edsim51di: Update DOWNLOAD to https.
|
2022-03-04 02:48:05 +00:00 |
|
engauge
|
academic/engauge: Updated for version 12.1.
|
2022-02-27 22:29:05 -06:00 |
|
ent
|
academic/ent: remove template comment.
|
2021-10-13 00:51:26 +07:00 |
|
eprover
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
equalx
|
academic/equalx: Fix build for qt5.
|
2021-10-13 00:51:26 +07:00 |
|
ess
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
evopedia_qt
|
academic/evopedia_qt: Use qt4.
|
2022-02-27 22:29:05 -06:00 |
|
exonerate
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
extrema
|
academic/extrema: Remove .la files.
|
2022-03-08 09:44:26 +07:00 |
|
fann
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
fastqc
|
various: Use zulu jdk builds for REQUIRES.
|
2022-03-03 15:56:51 +07:00 |
|
fet
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
fiji
|
academic/fiji: Fix VERSION.
|
2022-03-12 11:29:21 +13:00 |
|
finchtv
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
fityk
|
academic/fityk: Fix wxPython/wxGTK3 conflict.
|
2022-03-09 17:20:43 +07:00 |
|
flann
|
academic/flann: Fix building with the newer cmake, cleanups.
|
2022-02-06 15:47:07 +07:00 |
|
flexbar
|
academic/flexbar: Update copyright year.
|
2021-10-16 00:20:48 +07:00 |
|
free42
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
g3data
|
academic/g3data: Update github tarball handling.
|
2022-03-01 19:35:44 +07:00 |
|
galculator
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
gaw3
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
gchemutils
|
academic/gchemutils: Fix typo in script.
|
2022-03-09 14:41:35 -05:00 |
|
gcompris-qt
|
academic/gcompris-qt: Updated for version 2.3.
|
2022-03-07 11:06:50 +07:00 |
|
geda-gaf
|
academic/geda-gaf: Remove .la files.
|
2022-03-08 09:44:26 +07:00 |
|
gelemental
|
academic/gelemental: Remove .la files.
|
2022-03-08 09:44:27 +07:00 |
|
geneconv
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
genius
|
academic/genius: Updated for version 1.0.27.
|
2022-02-27 22:29:05 -06:00 |
|
genometools
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
genpak
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
geomview
|
academic/geomview: Remove .la files.
|
2022-03-08 09:44:27 +07:00 |
|
gerbv
|
academic/gerbv: Remove .la files.
|
2022-03-08 09:44:27 +07:00 |
|
getdp
|
academic/getdp: Updated for version 3.4.0
|
2021-12-31 08:27:04 +07:00 |
|
ggobi
|
academic/ggobi: Updated for version 2.1.11.
|
2022-03-09 17:20:42 +07:00 |
|
ghemical
|
academic/ghemical: Fix build.
|
2022-02-27 22:29:05 -06:00 |
|
glpk
|
academic/glpk: Remove .la files.
|
2022-03-08 09:44:25 +07:00 |
|
gmsh
|
academic/gmsh: Updated for version 4.9.2
|
2021-12-31 08:27:05 +07:00 |
|
gnucap
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
gp2fasta
|
academic/gp2fasta: Use qt4.
|
2022-02-27 22:29:05 -06:00 |
|
gpredict
|
academic/gpredict: revert to latest stable version 2.2.1
|
2022-02-24 22:05:13 +07:00 |
|
grace
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
gresistor
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
gretl
|
academic/gretl: Remove .la files.
|
2022-03-08 09:44:27 +07:00 |
|
gri
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
grpn
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
gspiceui
|
academic/gspiceui: Depend on wxGTK3 instead of wxPython3
|
2021-10-02 16:50:37 +07:00 |
|
gtkwave
|
academic/gtkwave: Updated for version 3.3.111.
|
2022-02-27 22:29:05 -06:00 |
|
gtypist
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
gwyddion
|
academic/gwyddion: Remove .la files.
|
2022-03-08 09:44:27 +07:00 |
|
h5utils
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
harminv
|
academic/harminv: Remove .la files.
|
2022-03-08 09:44:27 +07:00 |
|
hyphy
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
iTest
|
academic/iTest: Use qt4.
|
2022-02-27 22:29:06 -06:00 |
|
io_lib
|
academic/io_lib: Remove .la files.
|
2022-03-08 09:44:28 +07:00 |
|
irsim
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
isoelectric-point
|
academic/isoelectric-point: Use qt4.
|
2022-02-27 22:29:06 -06:00 |
|
itex2mml
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
jalview
|
academic/jalview: Use zulu-openjdk11.
|
2022-03-03 15:56:49 +07:00 |
|
jellyfish_k-mer
|
academic/jellyfish_k-mer: Remove .la files.
|
2022-03-08 09:44:28 +07:00 |
|
jpicedt
|
various: Use zulu jdk builds for REQUIRES.
|
2022-03-03 15:56:51 +07:00 |
|
jugglinglab
|
various: Use zulu jdk builds for REQUIRES.
|
2022-03-03 15:56:51 +07:00 |
|
karma
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
kiwisolver
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
klavaro
|
academic/klavaro: Updated for version 3.11.
|
2022-02-17 12:58:30 +07:00 |
|
klu
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
knime
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
kraken
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
ktikz
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
kurso
|
academic/kurso: x86 is unsupported.
|
2022-03-12 11:30:45 +13:00 |
|
labplot2
|
academic/labplot2: Wrap README at 72 columns.
|
2022-03-12 14:34:49 -05:00 |
|
ladr
|
academic/ladr: Wrap README at 72 columns.
|
2022-03-12 14:35:24 -05:00 |
|
lalnview
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
lapack95
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
lapacke
|
academic/lapacke: Updated for version 3.10.0
|
2021-09-06 08:50:29 +07:00 |
|
latex2html
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
ldl
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
libghemical
|
academic/libghemical: Remove .la files.
|
2022-03-08 09:44:28 +07:00 |
|
link-grammar
|
academic/link-grammar: Remove .la files.
|
2022-03-08 09:44:28 +07:00 |
|
locarna
|
academic/locarna: Remove .la files.
|
2022-03-08 09:44:28 +07:00 |
|
lpsolve
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
mafft
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
magic
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
mathics
|
academic/mathics: Fix dependency.
|
2021-07-25 16:55:59 +07:00 |
|
mathjax2
|
academic/mathjax2: Fix github tarball handling.
|
2022-03-01 19:35:44 +07:00 |
|
mathomatic
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
matio
|
academic/matio: Remove .la files.
|
2022-03-08 09:44:28 +07:00 |
|
maxima
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
meep
|
academic/meep: Remove .la files.
|
2022-03-08 09:44:28 +07:00 |
|
megax
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
meme-db-gomo
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
meme-db-motif
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
meme-db-tgene
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
meme-suite
|
academic/meme-suite: Remove python3 dep (part of slackware).
|
2022-02-14 08:06:58 +07:00 |
|
mendeleydesktop
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
metis
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
mkDSSP
|
academic/mkDSSP: Updated for version 4.0.3, switch to cmake.
|
2022-02-07 23:04:38 +07:00 |
|
mpb
|
academic/mpb: Remove .la files.
|
2022-03-08 09:44:29 +07:00 |
|
mrbayes
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
muscle
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
ncbi-blast
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
ncbi-blast+
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
ncbi-rmblastn
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
nco
|
academic/nco: Remove .la files.
|
2022-03-08 09:44:29 +07:00 |
|
ncview
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
ngspice
|
academid/ngspice: Fix URLs.
|
2022-03-11 06:13:08 +07:00 |
|
novocraft
|
academic/novocraft: files update.
|
2021-10-16 00:19:04 +07:00 |
|
octave
|
academic/octave: Wrap README at 72 columns.
|
2022-03-12 14:35:56 -05:00 |
|
openboard
|
academic/openboard: Fix slack-desc.
|
2022-03-12 11:31:57 +13:00 |
|
pal2nal
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
paml
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
pamlX
|
academic/pamlX: Use qt4.
|
2022-02-27 22:29:06 -06:00 |
|
papi
|
academic/papi: Updated for version 6.0.0.1.
|
2022-02-27 22:29:06 -06:00 |
|
pari
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
parmetis
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
patsy
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
pcalc
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
pcb
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
perlprimer
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
pianobooster
|
academic/pianobooster: Added the dependency ftgl.
|
2022-02-27 22:29:06 -06:00 |
|
plasmidomics
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
primer3
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
pspp
|
academic/pspp: Updated for version 1.4.1.
|
2022-02-27 22:29:06 -06:00 |
|
pulseview
|
academic/pulseview: Updated for version 20220225_4efbe9b.
|
2022-02-27 22:29:06 -06:00 |
|
pyCRAC
|
academic/pyCRAC: Update MD5SUM.
|
2022-03-04 03:30:43 +00:00 |
|
pyfits
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
pysam
|
academic/pysam: Use internal htslib-1.14
|
2022-03-05 08:20:12 +07:00 |
|
qalculate-gtk
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
qcl
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
qhull
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
qrupdate
|
academic/qrupdate: Wrap README at 72 columns.
|
2022-03-12 14:36:23 -05:00 |
|
qucs
|
academic/qucs: minor change + update DEPS
|
2022-02-08 10:28:35 +07:00 |
|
rbio
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
reduce-algebra
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
root
|
academic/root: Actually install doinst.sh.
|
2022-03-17 12:38:15 -04:00 |
|
rpy2
|
academic/rpy2: Update DEP.
|
2021-11-24 09:00:05 +07:00 |
|
sage
|
academic/sage: Updated for version 9.4
|
2022-01-17 09:00:27 +07:00 |
|
sage-bin
|
academic/sage-bin: Fix quote.
|
2022-02-12 13:31:15 +07:00 |
|
samtools
|
academic/samtools: Update to version 1.15
|
2022-03-05 08:18:59 +07:00 |
|
samtools-legacy
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
scidavis
|
academic/scidavis: Update DEPS and infomation in the build script
|
2021-12-31 08:27:05 +07:00 |
|
scilab
|
various: Use zulu jdk builds for REQUIRES.
|
2022-03-03 15:56:51 +07:00 |
|
scipy
|
academic/scipy: Updated for version 1.2.2.
|
2022-01-22 08:22:58 +07:00 |
|
scipy3
|
academic/scipy3: Wrap README at 72 columns.
|
2022-03-12 14:37:53 -05:00 |
|
seaview
|
academic/seaview: Removed the treerecs dependency (ftb).
|
2022-03-01 19:35:45 +07:00 |
|
seqkit
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
sequence-analysis
|
academic/sequence-analysis: Use zulu-openjdk11.
|
2022-03-03 15:56:49 +07:00 |
|
sigrok-cli
|
academic/sigrok-cli: Updated for version 20220222_525f481.
|
2022-03-01 19:35:46 +07:00 |
|
siril
|
academic/siril: Fix VERSION.
|
2022-03-12 11:36:35 +13:00 |
|
smath-studio
|
academic/smath-studio: Updated email
|
2022-01-22 08:22:59 +07:00 |
|
snpEff
|
academic/snpEff: Use zulu-openjdk11.
|
2022-03-03 15:56:49 +07:00 |
|
solfege
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
spades
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
speedcrunch
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
spiceopus
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
spidey
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
spqr
|
academic/spqr: Wrap README at 72 columns.
|
2022-03-12 14:38:22 -05:00 |
|
squizz
|
academic/squizz: Remove .la files.
|
2022-03-08 09:44:29 +07:00 |
|
staden
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
stellarium
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
stringtie
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
suitesparse
|
academic/suitesparse: Wrap README at 72 columns.
|
2022-03-12 14:39:07 -05:00 |
|
suitesparseconfig
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
sundials
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
sword
|
academic/sword: Remove .la files.
|
2022-02-16 08:20:04 +07:00 |
|
sword-data-kjv
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
t_coffee
|
academic/t_coffee: Updated for version 13.45.58.c355d11.
|
2022-03-01 19:35:46 +07:00 |
|
tabix-legacy
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
tiemu
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
tilem
|
academic/tilem: Fix for gcc >= 10.x.
|
2022-03-01 19:35:46 +07:00 |
|
tilem2
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
tkgate
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
topdraw
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
tophat
|
academic/tophat: Use -std=c++14.
|
2022-03-03 09:38:11 +00:00 |
|
treebest-ensembl
|
academic/treebest-ensembl: Wrap README at 72 columns.
|
2022-03-12 14:40:15 -05:00 |
|
treeviewx
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
trfind
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
trimmomatic
|
academic/trimmomatic: Use zulu-openjdk11.
|
2022-03-03 15:56:49 +07:00 |
|
tuxmath
|
academic/tuxmath: Rename blits. Remove dupe lan player.
|
2022-03-04 09:46:12 +00:00 |
|
tuxtype2
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
ucsc-blat
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
ugene
|
academic/ugene: Wrap README at 72 columns.
|
2022-03-12 14:40:34 -05:00 |
|
umfpack
|
academic/umfpack: Wrap README at 72 columns.
|
2022-03-12 14:40:59 -05:00 |
|
units
|
academic/units: updated for version 2.21
|
2021-08-01 00:35:44 +07:00 |
|
vcftools
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
verilator
|
academic/verilator: Make slack-desc ASCII.
|
2022-03-17 12:38:15 -04:00 |
|
verilog
|
academic/verilog: Updated for version 11.0.
|
2022-03-03 10:24:49 +00:00 |
|
veusz
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
wehi-cellsymphony
|
academic/wehi-cellsymphony: Use zulu-openjdk11.
|
2022-03-03 15:56:49 +07:00 |
|
wehi-deid
|
academic/wehi-deid: Use zulu-openjdk11.
|
2022-03-03 15:56:49 +07:00 |
|
wehi-hackit
|
academic/wehi-hackit: Use zulu-openjdk11.
|
2022-03-03 15:56:49 +07:00 |
|
wehi-weasel
|
academic/wehi-weasel: Use zulu-openjdk11.
|
2022-03-03 15:56:48 +07:00 |
|
wmcalc
|
academic/wmcalc: remove template comment.
|
2021-10-13 00:51:26 +07:00 |
|
wxMaxima
|
academic/wxMaxima: Fix github tarball handling.
|
2022-03-01 19:35:44 +07:00 |
|
xcircuit
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
xephem
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
xflr5
|
academic/xflr5: Wrap README at 72 columns.
|
2022-03-12 14:41:26 -05:00 |
|
xfoil
|
academic/xfoil: Updated the patch to fix build.
|
2021-08-14 21:18:00 +07:00 |
|
xiphos
|
academic/xiphos: Fix build on current.
|
2021-12-03 18:12:12 +07:00 |
|
xoscope
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
|
z3
|
academic/z3: Fix github tarball handling.
|
2022-03-01 19:35:44 +07:00 |
|
zotero
|
All: Support $PRINT_PACKAGE_NAME env var
|
2021-07-17 21:55:09 +02:00 |
2b96e2027e