slackbuilds/academic/meme-db-motif
Petar Petrov 6074436888 academic/meme-db-motif: Updated for version 12.23.
Signed-off-by: Dave Woodfall <dave@slackbuilds.org>
2022-09-04 04:57:25 +01:00
..
README academic/meme-db-motif: Added (MEME Suite motif databases) 2020-01-12 08:48:00 +07:00
meme-db-motif.SlackBuild academic/meme-db-motif: Updated for version 12.23. 2022-09-04 04:57:25 +01:00
meme-db-motif.info academic/meme-db-motif: Updated for version 12.23. 2022-09-04 04:57:25 +01:00
slack-desc academic/meme-db-motif: Added (MEME Suite motif databases) 2020-01-12 08:48:00 +07:00

README

Motif Databases (updated 28 Oct 2019) to be used with MEME Suite:

Eukaryote DNA (13 Databases)
Prokaryote DNA (4 Databases)
Methylcytosine DNA (1 Databases)
JASPAR (NON-REDUNDANT) DNA (21 Databases)
JASPAR (REDUNDANT) DNA (21 Databases)
JASPAR COLLECTIONS DNA (5 Databases)
TFBSshape DNA (3 Databases)
CIS-BP Single Species DNA (321 Databases)
ARABIDOPSIS (Arabidopsis thaliana) DNA (2 Databases)
ECOLI (Escherichia coli) DNA (2 Databases)
FLY (Drosophila melanogaster) DNA (6 Databases)
HUMAN (Homo sapiens) DNA (4 Databases)
MALARIA (Plasmodia falciparum) DNA (1 Databases)
MOUSE (Mus musculus) DNA (5 Databases)
WORM (Caenorhabditis elegans) DNA (1 Databases)
YEAST (Saccharomyces_cerevisiae) DNA (6 Databases)
CISBP-RNA Single Species RNA (268 Databases)
CISBP-RNA Single Species RNA (DNA-encoded) (268 Databases)
RNA (25 Databases)
RNA (DNA-encoded) (25 Databases)
miRBase Single Species microRNA (223 Databases)
miRBase Single Species microRNA (DNA-encoded) (223 Databases)
Protein Motifs (2 Databases)

Note!
The unarchived size of this is ~140 MB