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slackbuilds
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2170 Commits

Author SHA1 Message Date
Willy Sudiarto Raharjo fa711176ab
academic/cryptominisat: Fix MD5SUM. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-26 02:35:20 +07:00
Petar Petrov ce35e022ab academic/kraken: Added (Assigning Taxonomic Labels). 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-25 05:38:56 +07:00
Petar Petrov 207b4e9661 academic/jellyfish_k-mer: Added (k-mers counting tools). 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-25 05:33:47 +07:00
Petar Petrov 6769441280 academic/ugene: Updated for version 1.31.1. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-24 22:17:00 +07:00
Petar Petrov f80572fa0f academic/trimmomatic: Added (Trimming Tool). 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-24 22:16:59 +07:00
Petar Petrov a986484738 academic/ncbi-rmblastn: Update DEP. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-24 22:16:58 +07:00
Willy Sudiarto Raharjo 98f0d76332 academic/ncbi-blast-plus: Removed (Use ncbi-blast+). 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-24 22:16:57 +07:00
Willy Sudiarto Raharjo f0c4d5692e academic/ImageJ: Removed (Use fiji). 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-24 22:16:57 +07:00
Willy Sudiarto Raharjo e27ce7ca53 academic/ij-plugins-UCSD: Removed (Use fiji). 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-24 22:16:56 +07:00
Willy Sudiarto Raharjo 7ae8a3f7fd academic/ij-plugins-LOCI: Removed (Use fiji). 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-24 22:16:55 +07:00
Petar Petrov 28c1302520 academic/fiji: Added (ImageJ Distribution). 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-24 22:16:55 +07:00
Petar Petrov 8bc77c8477 academic/wehi-weasel: Updated for version 3.5.0.17. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-24 22:16:53 +07:00
Petar Petrov 3c25891487 academic/vcftools: Updated for version 0.1.16. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-24 22:16:53 +07:00
Petar Petrov 6288d18de7 academic/hyphy: Updated for version 2.3.14. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-24 22:16:52 +07:00
Petar Petrov 2183ac8328 academic/stringtie: Added (Assembler of RNA-Seq alignments). 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-24 22:16:51 +07:00
Petar Petrov 201f403821 academic/tabix-legacy: Added (Generic indexer). 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-24 22:16:45 +07:00
Petar Petrov a2f175aa89 academic/spades: Updated for version 3.13.0. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-24 10:55:58 +07:00
Petar Petrov 9180142c4c academic/samtools-legacy: Added (Sequence Alignment/Map Tools). 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-24 10:55:05 +07:00
Petar Petrov c0f0a1270e academic/ncbi-blast+: Added (BLAST+ Command Line Applications). 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-24 10:53:59 +07:00
Petar Petrov 7bccd6566a academic/ncbi-blast: Update script. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-24 09:24:23 +07:00
Petar Petrov 7f96bc9953 academic/megax: Updated for version 10.0.5_1. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-24 09:21:25 +07:00
Petar Petrov f655890fde academic/mafft: Updated for version 7.407. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-24 09:15:34 +07:00
Petar Petrov 5a3aecffdc academic/diamond: Added (A sequence aligner). 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-24 09:11:11 +07:00
Petar Petrov f6b1cc61ca academic/clark-ugene: Added (supervised sequence classification). 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-24 09:09:59 +07:00
Petar Petrov 6e78119103 academic/bppsuite: Updated for version 2.4.1. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-24 09:04:15 +07:00
Petar Petrov 72167e4105 academic/bpp-seq-omics: Updated for version 2.4.1. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-24 09:03:37 +07:00
Petar Petrov 372b5af927 academic/bpp-seq: Updated for version 2.4.1. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-24 09:02:59 +07:00
Petar Petrov 6166a3bd04 academic/bpp-popgen: Updated for version 2.4.1. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-24 09:02:22 +07:00
Petar Petrov 1ba37d3090 academic/bpp-phyl-omics: Updated for version 2.4.1. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-24 09:01:40 +07:00
Petar Petrov f5981905ee academic/bpp-phyl: Updated for version 2.4.1. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-24 09:01:05 +07:00
Petar Petrov 9ada33c734 academic/bpp-core: Updated for version 2.4.1. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-24 09:00:24 +07:00
Petar Petrov 1fecb5b64f academic/bowtie2-legacy: Added (aligning sequencing reads). 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-24 08:59:33 +07:00
Petar Petrov f240a7ca47 academic/archaeopteryx: Updated for version 0.9928b. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-24 08:56:55 +07:00
Petar Petrov 9f694eee16 academic/aliview: Updated for version 1.25. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-24 08:56:07 +07:00
Petar Petrov ac5136aa76 academic/RepeatMasker: Updated for version 4.0.8. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-24 08:55:30 +07:00
Petar Petrov ad14a60f0d academic/FCSalyzer: Updated for version 0.9.16_alpha. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-24 08:54:20 +07:00
Petar Petrov 9c795f8652 academic/WEVOTE: Added (WEighted VOting Taxonomic idEntification). 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-24 08:52:55 +07:00
Edward W. Koenig 0264bc07d2
academic/boinc: Updated for version 7.14.2. 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2018-12-22 08:44:24 +07:00
Alan Aversa cdc5c40e52 academic/cryptominisat: Updated for version 5.6.6. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-22 01:24:33 -09:00
Rob van Nues c438969e42 academic/fastqc: Updated for version 0.11.8 + new maintainer. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-22 00:03:06 -09:00
Andrzej Telszewski 1e95c8dace
academic/pulseview: Updated for version 0.4.1. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-16 16:24:58 +07:00
Andrzej Telszewski 2cc91f78d3
academic/sigrok-cli: Updated for version 0.7.1. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-16 16:24:13 +07:00
Edward W. Koenig dc0d58fc20
academic/Gridcoin-Research: Updated for version 4.0.1.0. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-15 09:17:10 +07:00
Andrew Payne d6653a87e9 academic/zotero: Updated for version 5.0.58 + new maintainer. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-12-10 13:31:02 +07:00
Larry Hajali 1247d33132
academic/qalculate-gtk: Updated for version 2.8.2 
Signed-off-by: Larry Hajali <larryhaja[at]gmail[dot]com>
 2018-12-09 13:17:30 +07:00
Larry Hajali 8e7367f164
academic/libqalculate: Updated for version 2.8.2 
Signed-off-by: Larry Hajali <larryhaja[at]gmail[dot]com>
 2018-12-09 13:17:30 +07:00
Dave Woodfall 6aa49dafac
academic/calc: Update to 2.12.7.2 2018-12-01 07:27:58 +07:00
Rob van Nues 66c3778e89
academic/novocraft: Updated for version 3.09.01. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2018-12-01 07:27:49 +07:00
rob van nues f93ff9041c
academic/pyCRAC: Updated for version 1.3.3. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2018-12-01 07:27:48 +07:00
Rob van Nues 4457fbfa3e
academic/pysam: Updated for version 0.15.1. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2018-12-01 07:27:48 +07:00